ID:rno-mir-667 |
Coordinate:chr6:133869570-133869661 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -39.1 | -39.1 | -39.0 |
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ACAGGCGTGGGCAACCCATTTTCATAGGTTGAAAAATCCCTTTCCACCTGGTGGGTACTGGCCTCGGTGCTGGTGGAGCAGTGAGCACGCCATACATTATATCTGTGACACCTGCCACCCAGCCCAAGGCCCCTAGGCCCACATACTTCTGGAGGGGAGTTTATCGTGGATTCACCAAAGGAATGCAGAGGA
*************************************************.((((((...(((((.((.((((((((....(((..((((..............)))).)))...))).))))))).))))).....)))))).************************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGT............................................................... | 24 | 1 | 1 | 68.00 | 68 | 68 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAT................................................................ | 23 | 1 | 1 | 23.00 | 23 | 23 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGA............................................................... | 24 | 1 | 1 | 19.00 | 19 | 19 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAAA............................................................... | 24 | 2 | 1 | 18.00 | 18 | 18 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAG................................................................ | 23 | 0 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAAT............................................................... | 24 | 2 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGTAT............................................................. | 26 | 3 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAA................................................................ | 23 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAGT............................................................... | 23 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGTT.............................................................. | 25 | 2 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGTA.............................................................. | 25 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAA................................................................. | 22 | 0 | 1 | 4.00 | 4 | 3 | 0 | 1 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAATT............................................................... | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGAT.............................................................. | 25 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATAA............................................................... | 24 | 3 | 2 | 3.50 | 7 | 7 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAATAT.............................................................. | 25 | 3 | 2 | 3.50 | 7 | 7 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAGA............................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAG................................................................ | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGAA.............................................................. | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAATTT.............................................................. | 25 | 3 | 3 | 2.67 | 8 | 8 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGTTT............................................................. | 26 | 3 | 2 | 2.50 | 5 | 5 | 0 | 0 |
| ........................................................................................................ATGACACCTGCCACCCAGCCCAAGT............................................................... | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGAAA............................................................. | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATT................................................................ | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAT................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAATA............................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAAAT.............................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAAT............................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAATT.............................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATAT............................................................... | 24 | 3 | 3 | 1.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................................ACACCTGCCACCCAGCCCAAGT............................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAGTA.............................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAGGT............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAAG............................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCTAT................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAGTAC............................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................CGGTGCTGGTGGAGCAGTGAGCA......................................................................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................................................ATGACACCTGCCACCCAGCCCAAG................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATTGT.............................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................ACCTGCCACCCAGCCCAA................................................................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATTA............................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGAAACCTGCCACCCAGCCCAAT................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................ACACCTGCCACCCAGCCCAAGA............................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAGA................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATAGT.............................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCGGCCCAAGT............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATA................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAGAAT............................................................. | 26 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCAACCAGCCCAAG................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAAGT.............................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCC.................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATTT............................................................... | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCA.................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCGA................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAGAT.............................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................ACACCTGCCACCCAGCCCAAA................................................................ | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAGAA............................................................... | 24 | 3 | 4 | 0.75 | 3 | 3 | 0 | 0 |
| ....................................................................................................AAGTATGACACCTGCCACCCAGCCC................................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................................................ATGACACCTGCCACCCAGCCCAAGTT.............................................................. | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAGTAT............................................................. | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAAAAA.............................................................. | 25 | 3 | 6 | 0.50 | 3 | 3 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAATAA.............................................................. | 25 | 3 | 5 | 0.40 | 2 | 2 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCTAAA............................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCAGTGA.............................................................. | 25 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAATA............................................................... | 23 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAAA............................................................... | 23 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCAAGCCCAAA................................................................ | 23 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTGCCACCCAGCCCAAAAT.............................................................. | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GACACCTTGCACCCAGCCCAAGA............................................................... | 23 | 3 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGACACCTGCCACCCAGCCCATTC............................................................... | 24 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| .........................................................................................................TGTCACCTGCCACACAGCCCAAGT............................................................... | 24 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 |
|
TGTCCGCACCCGTTGGGTAAAAGTATCCAACTTTTTAGGGAAAGGTGGACCACCCATGACCGGAGCCACGACCACCTCGTCACTCGTGCGGTATGTAATATAGACACTGTGGACGGTGGGTCGGGTTCCGGGGATCCGGGTGTATGAAGACCTCCCCTCAAATAGCACCTAAGTGGTTTCCTTACGTCTCCT
*************************************************.((((((...(((((.((.((((((((....(((..((((..............)))).)))...))).))))))).))))).....)))))).************************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
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Generated: 04/30/2015 at 05:47 PM