ID:

rno-mir-652

Coordinate:

chrX:114002534-114002614 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.8 -49.6 -49.6

Sense Strand Reads

TTTATTCCAAATTCCAGGTGTGTTTCCACGAAGGGCCTCCAGGAATGGCTATGCACTGCACAACCCTAGGAGGGGGTGCCATTCACATAGACTATAATTGAATGGCGCCACTAGGGTTGTGCAGTGTACAACCTACACAACTATACGCGGCGATCCCGGCATAAAGAATTAATGTATTAAT
********************************************..((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...))....********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
....................................................................................................AATGGCGCCACTAGGGTTGTGT........................................................... 22 1 1 3871.00 3871 3545 296 30
....................................................................................................AATGGCGCCACTAGGGTTGTGA........................................................... 22 1 1 1128.00 1128 1022 104 2
....................................................................................................AATGGCGCCACTAGGGTTGTGTT.......................................................... 23 2 1 628.00 628 617 11 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTCA................................................................................................ 26 0 1 313.00 313 312 0 1
....................................................................................................AATGGCGCCACTAGGGTTGTGC........................................................... 22 0 1 261.00 261 238 23 0
....................................................................................................AATGGCGCCACTAGGGTTGT............................................................. 20 0 1 244.00 244 202 42 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTA.......................................................... 23 1 1 242.00 242 242 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTG............................................................ 21 0 1 233.00 233 154 79 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAA.......................................................... 23 1 1 170.00 170 163 7 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTTT......................................................... 24 3 1 159.00 159 155 2 2
............................................................CAACCCTAGGAGGGGGTGCCATTCA................................................................................................ 25 0 1 142.00 142 142 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAA......................................................... 24 2 1 133.00 133 133 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAT.......................................................... 23 2 1 130.00 130 126 4 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAT......................................................... 24 2 1 123.00 123 122 1 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGT........................................................... 21 1 1 84.00 84 78 6 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCT.......................................................... 23 1 1 74.00 74 73 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTTT........................................................... 22 2 1 74.00 74 69 5 0
...........................................................ACAACCCTAGGAGGGGGTGCCATT.................................................................................................. 24 0 1 65.00 65 65 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCA.......................................................... 23 0 1 52.00 52 50 2 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTGT........................................................... 24 1 1 52.00 52 50 2 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTTA......................................................... 24 3 1 45.00 45 45 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTC................................................................................................. 25 0 1 44.00 44 43 1 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTGA........................................................... 24 1 1 37.00 37 37 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCAA......................................................... 24 1 1 28.00 28 28 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAAA......................................................... 24 2 1 27.00 27 26 1 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTCT................................................................................................ 26 1 1 27.00 27 27 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCAT......................................................... 24 1 1 27.00 27 26 1 0
....................................................................................................AATGGCGCCACTAGGGTTG.............................................................. 19 0 1 26.00 26 16 10 0
....................................................................................................AATGGCGCCACTAGGGTTGTAA........................................................... 22 2 1 24.00 24 22 2 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTTT......................................................... 23 3 1 23.00 23 23 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGA........................................................... 21 1 1 23.00 23 21 2 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGT........................................................... 23 2 1 21.00 21 18 3 0
....................................................................................................AATGGCGCCACTAGGGTTGTCG........................................................... 22 2 1 21.00 21 0 0 21
............................................................CAACCCTAGGAGGGGGTGCCATTC................................................................................................. 24 0 1 20.00 20 20 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCAT................................................................................................... 23 0 1 19.00 19 18 1 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTT................................................................................................. 25 1 1 19.00 19 19 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTT.......................................................... 22 2 1 18.00 18 17 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTT......................................................... 24 2 1 17.00 17 17 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTT............................................................ 21 1 1 15.00 15 14 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTCG......................................................... 24 2 1 15.00 15 0 0 15
..................................................................................................TGAATGGCGCCACTAGGGTTGTG............................................................ 23 0 1 15.00 15 14 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTTTT.......................................................... 23 3 2 14.50 29 27 2 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTCAA............................................................................................... 27 1 1 14.00 14 14 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTA.......................................................... 22 1 1 13.00 13 13 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAAT......................................................... 24 2 1 13.00 13 12 0 1
....................................................................................................AATGGCGCCACTAGGGTTGTGAG.......................................................... 23 2 1 12.00 12 12 0 0
....................................................................................................AATGGCGCCACTAGGGCTGTGT........................................................... 22 2 1 12.00 12 12 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTTA........................................................... 22 2 1 11.00 11 11 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGG........................................................... 22 1 1 11.00 11 9 2 0
...................................................................................................GAATGGCGCCACTAGGGTTGTGT........................................................... 23 1 1 11.00 11 11 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGA........................................................... 23 2 1 10.00 10 8 2 0
....................................................................................................AATGGCGCCACTACGGTTGTGT........................................................... 22 2 1 10.00 10 10 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGAA.......................................................... 22 1 1 10.00 10 9 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTAAA.......................................................... 23 2 1 10.00 10 9 1 0
.....................................................................................................ATGGCGCCACTAGGGTTGT............................................................. 19 0 1 9.00 9 7 2 0
....................................................................................................AATGGCGCCACTAAGGTTGTGT........................................................... 22 2 1 9.00 9 9 0 0
............................................................CAACCCTAGGAGGGGGTGCCATT.................................................................................................. 23 0 1 9.00 9 9 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTTTT........................................................ 25 3 1 9.00 9 9 0 0
....................................................................................................AATGGCGCCACCAGGGTTGTGT........................................................... 22 2 1 8.00 8 8 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTCT................................................................................................ 25 1 1 8.00 8 8 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTCACTT............................................................................................. 28 1 1 8.00 8 8 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGC........................................................... 23 1 1 8.00 8 7 1 0
....................................................................................................CATGGCGCCACTAGGGTTGTGT........................................................... 22 2 1 8.00 8 8 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAG......................................................... 24 1 1 8.00 8 8 0 0
....................................................................................................AATGGCGCCAATAGGGTTGTGT........................................................... 22 2 2 8.00 16 15 0 1
...........................................................ACAACCCTAGGAGGGGGTGCCATTCAT............................................................................................... 27 1 1 8.00 8 8 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGATT......................................................... 24 3 1 7.00 7 7 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGC........................................................... 21 0 1 7.00 7 6 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAAT........................................................ 25 2 1 7.00 7 7 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTA......................................................... 24 2 1 7.00 7 7 0 0
....................................................................................................AATGGCGCCACTAAGGTTGTGA........................................................... 22 2 1 7.00 7 7 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTTT........................................................ 25 2 1 7.00 7 5 2 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTTG......................................................... 24 2 1 7.00 7 7 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTAA........................................................ 25 3 2 7.00 14 14 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTA................................................................................................. 25 1 1 7.00 7 7 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAAA........................................................ 25 3 1 7.00 7 7 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTTT........................................................... 21 2 1 7.00 7 6 1 0
............................................................CAACCCTAGGAGGGGGTGCCATTT................................................................................................. 24 1 1 6.00 6 6 0 0
....................................................................................................AATGGCGCAACTAGGGTTGTGT........................................................... 22 2 1 6.00 6 6 0 0
...................................................................................................GAATGGCGCCACTAGGGTTGTGA........................................................... 23 1 1 6.00 6 6 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTAA......................................................... 23 2 1 6.00 6 6 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTTTA.......................................................... 23 2 1 6.00 6 6 0 0
....................................................................................................AATAGCGCCACTAGGGTTGTGT........................................................... 22 2 1 6.00 6 6 0 0
......................................................................................................TGGCGCCACTAGGGTTGTGT........................................................... 20 1 1 6.00 6 6 0 0
....................................................................................................AATGGCGCCACAAGGGTTGTGT........................................................... 22 2 2 6.00 12 12 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTAA................................................................................................ 26 1 1 5.00 5 5 0 0
....................................................................................................CATGGCGCCACTAGGGTTGTGA........................................................... 22 2 1 5.00 5 5 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCA.................................................................................................... 22 0 1 5.00 5 5 0 0
....................................................................................................AATGGCGCCACTAGGGGTGTGT........................................................... 22 2 1 5.00 5 4 0 1
....................................................................................................AATGGCGCCACTAGGGTTGCG............................................................ 21 1 1 5.00 5 1 0 4
...........................................................ACAACCCTAGGAGGGGGTGCCCTTCA................................................................................................ 26 1 1 5.00 5 5 0 0
....................................................................................................AATCGCGCCACTAGGGTTGTGT........................................................... 22 2 1 5.00 5 5 0 0
....................................................................................................AATGGCGCCAATAGGGTTGTGA........................................................... 22 2 1 5.00 5 5 0 0
............................................................CAACCCTAGGAGGGGGTGCCAT................................................................................................... 22 0 1 5.00 5 4 1 0
.............................................................AACCCTAGGAGGGGGTGCCATTCA................................................................................................ 24 0 1 5.00 5 5 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTCACT.............................................................................................. 27 1 1 5.00 5 5 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATAA................................................................................................. 25 2 1 5.00 5 5 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTCAT............................................................................................... 26 1 1 5.00 5 5 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTTT........................................................... 24 2 1 5.00 5 5 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAGA......................................................... 24 3 1 5.00 5 5 0 0
..........................................................AACAACCCTAGGAGGGGGTGCCATTCA................................................................................................ 27 1 1 5.00 5 5 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTAT......................................................... 23 2 1 5.00 5 5 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTCC................................................................................................ 26 1 1 5.00 5 5 0 0
....................................................................................................ACTGGCGCCACTAGGGTTGTGT........................................................... 22 2 2 4.50 9 8 0 1
....................................................................................................AATGGCGCCACTAAGGTTGTGTT.......................................................... 23 3 1 4.00 4 4 0 0
....................................................................................................AAAGGCGCCACTAGGGTTGTGT........................................................... 22 2 1 4.00 4 2 2 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAC.......................................................... 23 2 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTTTGA........................................................... 22 2 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAAG......................................................... 24 1 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTAAT.......................................................... 23 3 1 4.00 4 4 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGTAT......................................................... 25 3 1 4.00 4 4 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATA.................................................................................................. 24 1 1 4.00 4 4 0 0
.......................................................................................................GGCGCCACTAGGGTTGTGT........................................................... 19 1 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGGA.......................................................... 23 1 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAC......................................................... 24 2 1 4.00 4 4 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTCG........................................................... 24 2 1 4.00 4 0 0 4
....................................................................................................AATGGCGACACTAGGGTTGTGT........................................................... 22 2 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGACG......................................................... 24 2 1 4.00 4 0 0 4
..................................................................................................TGAATGGCGCCACTAGGGTTGT............................................................. 22 0 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTAT........................................................... 22 2 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTCTGT........................................................... 22 2 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTTAA.......................................................... 23 2 1 4.00 4 4 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTG.............................................................. 21 0 1 4.00 4 3 1 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAAAA........................................................ 25 3 1 4.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTGA......................................................... 24 3 2 3.50 7 7 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGTT.......................................................... 24 3 2 3.50 7 7 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTC.......................................................... 23 2 1 3.00 3 3 0 0
....................................................................................................ATTGGCGCCACTAGGGTTGTG............................................................ 21 1 1 3.00 3 1 2 0
............................................................CAACCCTAGGAGGGGGTGCCATTA................................................................................................. 24 1 1 3.00 3 3 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTT............................................................ 23 1 1 3.00 3 3 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGTAA......................................................... 25 3 1 3.00 3 3 0 0
...........................................................ACACCCCTAGGAGGGGGTGCCATTCA................................................................................................ 26 1 1 3.00 3 3 0 0
......................................................................................................TGGCGCCACTAGGGTTGTGA........................................................... 20 1 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGGTGTGA........................................................... 22 2 1 3.00 3 3 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCAGA.................................................................................................. 24 2 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGCTGTGA........................................................... 22 2 1 3.00 3 3 0 0
....................................................................................................AATGGCACCACTAGGGTTGTGA........................................................... 22 2 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGTTGCGT........................................................... 22 2 1 3.00 3 3 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTAT................................................................................................ 26 2 1 3.00 3 3 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTTA................................................................................................ 26 1 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTG.......................................................... 23 2 1 3.00 3 2 1 0
...........................................................ACAACCCTAGGAGGAGGTGCCATTCA................................................................................................ 26 1 1 3.00 3 3 0 0
...........................................................ACAACCCTAGGAAGGGGTGCCATTCA................................................................................................ 26 1 1 3.00 3 3 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATGT................................................................................................. 25 2 1 3.00 3 3 0 0
....................................................................................................TATGGCGCCACTAGGGTTGTGT........................................................... 22 2 1 3.00 3 2 0 1
...........................................................ACAACCCTAGGAGGGGGTGCCAAAA................................................................................................. 25 3 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTTTAGA........................................................ 25 3 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTACGGTTGTGA........................................................... 22 2 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTCGGGTTGTGA........................................................... 22 2 1 3.00 3 3 0 0
....................................................................................................AATGGCTCCACTAGGGTTGTGT........................................................... 22 2 1 3.00 3 1 2 0
....................................................................................................ACTGGCGCCACTAGGGTTGTGA........................................................... 22 2 1 3.00 3 2 1 0
....................................................................................................AATGGCGCCACTAGAGTTGTGT........................................................... 22 2 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGTTGA............................................................. 20 1 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGGGTTGGGA........................................................... 22 2 1 3.00 3 2 1 0
.....................................................................................................ATGGCGCCACTAGGGTTGTG............................................................ 20 0 1 3.00 3 2 1 0
...................................................................................................TAATGGCGCCACTAGGGTTGTG............................................................ 22 1 1 3.00 3 3 0 0
...................................................................................................GAATGGCGCCACTAGGGTTGTCG........................................................... 23 2 1 3.00 3 0 0 3
....................................................................................................AACGGCGCCACTAGGGTTGTGT........................................................... 22 2 1 3.00 3 3 0 0
....................................................................................................AATGTCGCCACTAGGGTTGTGT........................................................... 22 2 1 3.00 3 2 1 0
...........................................................ACAACCCTAGGAGGGGGTGCCAAA.................................................................................................. 24 2 1 3.00 3 3 0 0
....................................................................................................AATGGCGCCACTAGCGTTGTGT........................................................... 22 2 2 2.50 5 3 2 0
....................................................................................................AATGGCGCCAGTAGGGTTGTGT........................................................... 22 2 2 2.50 5 4 1 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTTA......................................................... 23 3 2 2.50 5 5 0 0
..........................................................AACAACCCTAGGAGGGGGTGCCATTCT................................................................................................ 27 2 1 2.00 2 2 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTAA................................................................................................ 25 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGT................................................................ 17 0 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACAAGGGTTGTGAA.......................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTTGGGTTGTGT........................................................... 22 2 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCCTT.................................................................................................. 24 1 1 2.00 2 2 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTGTA.......................................................... 25 1 1 2.00 2 2 0 0
..........................................................AACAACCCTAGGAGGGGGTGCCATT.................................................................................................. 25 1 1 2.00 2 2 0 0
....................................................................................................CATGGCGCCACTAGGGTTGTGTT.......................................................... 23 3 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGCT.......................................................... 22 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGATGTGA........................................................... 22 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCAATAGGGTTGTGCT.......................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................AATGGCACCACTAGGGTTGTGT........................................................... 22 2 1 2.00 2 1 1 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTTT................................................................................................ 26 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTCA......................................................... 24 3 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGCTTT........................................................ 24 2 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGCGGGTGCCATTCA................................................................................................ 26 1 1 2.00 2 2 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGT............................................................. 21 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTATGGTTGTGT........................................................... 22 2 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCTTTT................................................................................................. 25 2 1 2.00 2 2 0 0
....................................................................................................AAGGGCGCCACTAGGGTTGTGT........................................................... 22 2 1 2.00 2 1 1 0
...........................................................ACAACCCTAGGAGGGGGTGCCAAAT................................................................................................. 25 3 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGCAA......................................................... 23 1 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCACTCA................................................................................................ 26 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTAT........................................................ 25 2 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTTTT........................................................ 24 3 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGTAAA........................................................ 24 3 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGTGTTGT............................................................. 20 1 1 2.00 2 1 1 0
....................................................................................................AATGGCGCCAATAGGGTTGTGAA.......................................................... 23 2 1 2.00 2 2 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTGTT.......................................................... 25 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGTGTTGTGT........................................................... 22 2 1 2.00 2 0 2 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTAAC........................................................ 25 3 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGAGTTGTGA........................................................... 22 2 1 2.00 2 1 1 0
....................................................................................................AATGACGCCACTAGGGTTGTGT........................................................... 22 2 1 2.00 2 2 0 0
............................................................CAACCCTAGGAGGGGGTGCCATA.................................................................................................. 23 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTTGA........................................................ 25 3 2 2.00 4 4 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCAAA........................................................ 25 2 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATAT................................................................................................. 25 2 1 2.00 2 2 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTCAA............................................................................................... 26 1 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATG.................................................................................................. 24 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTTAT........................................................ 25 3 1 2.00 2 2 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTGTTT......................................................... 26 3 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGCTT......................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................AACGGCGCCACTAGGGTTGTGA........................................................... 22 2 1 2.00 2 2 0 0
...................................................................................................TAATGGCGCCACTAGGGTTGT............................................................. 21 1 1 2.00 2 2 0 0
...................................................................................................GAATGGCGCCACTAGGGTTGTGTA.......................................................... 24 1 1 2.00 2 2 0 0
..........................................................AACAACCCTAGGAGGGGGTGCCATTGA................................................................................................ 27 2 1 2.00 2 2 0 0
....................................................................................................TATGGCGCCACTAGGGTTGTGA........................................................... 22 2 1 2.00 2 2 0 0
....................................................................................................AATTGCGCCACTAGGGTTGTGT........................................................... 22 2 1 2.00 2 2 0 0
............................................................CAACCCTAGGAGGGGGTGCCATAGA................................................................................................ 25 2 1 2.00 2 2 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGCAT......................................................... 23 1 1 2.00 2 2 0 0
........................................................TCAACAACCCTAGGAGGGGGTGCCAT................................................................................................... 26 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCATTAGGGTTGT............................................................. 20 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGGT.......................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCAAT........................................................ 25 1 1 2.00 2 2 0 0
...........................................................ACAACCCTAGGAGGGGGAGCCATT.................................................................................................. 24 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGCGA........................................................... 22 2 1 2.00 2 2 0 0
............................................................CAACCCTAGGAGGGCGTGCCATTCA................................................................................................ 25 1 1 2.00 2 2 0 0
.............................................................AACCCTAGGAGGGGGTGCCAAAAAC............................................................................................... 25 3 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGCTGTGC........................................................... 22 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTCGGGTTGTGT........................................................... 22 2 1 2.00 2 1 1 0
....................................................................................................AATGGCGCCACTAGGGATGTGC........................................................... 22 1 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTG......................................................... 24 1 1 2.00 2 1 1 0
..................................................................................................TGAATGGCGCCACTAGGGTTGTGTAA......................................................... 26 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCAATAGGGTTGTGTA.......................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTATT........................................................ 25 2 1 2.00 2 1 1 0
....................................................................................................AATGGCGCCCCTAGGGTTGTGT........................................................... 22 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGATGTGT........................................................... 22 2 2 2.00 4 3 0 1
....................................................................................................CATGGCGCCACTAGGGTTGTGTAA......................................................... 24 3 1 2.00 2 2 0 0
....................................................................................................AATGACGCCACTAGGGTTGTGAA.......................................................... 23 2 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTATGC........................................................... 22 1 1 2.00 2 2 0 0
....................................................................................................AACGGCGCCACTAGGGTTGTGAT.......................................................... 23 3 1 2.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGTGT......................................................... 24 3 2 1.50 3 3 0 0
..................................................................................................AAAATGGCGCCACTAGGGTTGTGT........................................................... 24 3 2 1.50 3 3 0 0
....................................................................................................AATGGCGCCACTAGGTTTGTGT........................................................... 22 2 2 1.50 3 0 3 0
....................................................................................................AATGGCGCCACTAGGGTTATGT........................................................... 22 2 2 1.50 3 3 0 0
.........................................................................................................CGCCACTAGGGTTGTGT........................................................... 17 1 4 1.25 5 5 0 0
...........................................................ACAACCCTAGGAGGGGGTACCATTCT................................................................................................ 26 2 1 1.00 1 1 0 0
....................................................................................................AATGGCACCACTAGGGTTGTGAA.......................................................... 23 2 1 1.00 1 1 0 0
....................................................................................................AATGCCGCCACTAGGGTTGTGT........................................................... 22 2 1 1.00 1 1 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTCAC............................................................................................... 26 0 1 1.00 1 1 0 0
...........................................................ACAACCCTAGGGGGGGGTGCCATT.................................................................................................. 24 1 1 1.00 1 1 0 0
....................................................................................................AACGGCGCCACTAGGGTTGTGTT.......................................................... 23 3 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGAAAT........................................................ 25 2 1 1.00 1 1 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCGTTC................................................................................................. 25 1 1 1.00 1 1 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGAGT........................................................... 24 2 1 1.00 1 0 0 1
....................................................................................................AATGGCGCCACTAGGGTTATGA........................................................... 22 2 1 1.00 1 1 0 0
............................................................CACCCCTAGGAGGGGGTGCCATTCA................................................................................................ 25 1 1 1.00 1 1 0 0
.....................................................................................................ATGGCGCCACTAGGGTTTTGT........................................................... 21 2 1 1.00 1 0 1 0
............................................................CCACCCTAGGAGGGGGTGCCATTTT................................................................................................ 25 3 1 1.00 1 1 0 0
.....................................................................................................AAGGCGCCACTAGGGTTGTGT........................................................... 21 2 1 1.00 1 0 1 0
...........................................................ACAACCCTAGGAGGGGGCGCCATT.................................................................................................. 24 1 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTATGCTT......................................................... 24 3 1 1.00 1 1 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTTT........................................................... 23 3 1 1.00 1 0 1 0
..................................................................................................TGAATGTCGCCACTAGGGTTGTGA........................................................... 24 2 1 1.00 1 1 0 0
............................................................CAACCCTAGGGGGGGGTGCCATTCA................................................................................................ 25 1 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGGAA......................................................... 24 2 1 1.00 1 1 0 0
....................................................................................................AATGGTGCCACTAGGGTTGTGTA.......................................................... 23 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCAATAGGGTTGT............................................................. 20 1 1 1.00 1 1 0 0
...................................................................................................AAATGGCGCCACTAGGGTTGTGCT.......................................................... 24 2 2 1.00 2 2 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTTAT............................................................................................... 26 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTATA....................................................... 26 3 1 1.00 1 1 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGCGAT.......................................................... 25 3 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCAATAGGGTTGTG............................................................ 21 1 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACAAGGGTTGTGC........................................................... 22 1 1 1.00 1 1 0 0
....................................................................................................AATGGCCCCACTAGGGTTGTGA........................................................... 22 2 1 1.00 1 1 0 0
.....................................................................................................ATGGCGCCACTAGGGTTGTGCA.......................................................... 22 0 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAAGGTTGTGTA.......................................................... 23 2 1 1.00 1 1 0 0
...........................................................ACAACCCTAGGAGGGGGTGCCATTCG................................................................................................ 26 1 1 1.00 1 1 0 0
...........................................................ACAACCCTAGGAGAGGGTGCCATTCA................................................................................................ 26 1 1 1.00 1 1 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTAT................................................................................................ 25 2 1 1.00 1 1 0 0
....................................................................................................AATGGCCCCACTAGGGTTGTG............................................................ 21 1 1 1.00 1 1 0 0
....................................................................................................ATTGGCGCCACTAGGGTTGTGT........................................................... 22 2 1 1.00 1 1 0 0
............................................................CAACCCTAGGAGGGGGTGCCATTAAA............................................................................................... 26 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGATGTT............................................................ 21 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGGTT......................................................... 24 3 1 1.00 1 1 0 0
...........................................................ACCCCCCTAGGAGGGGGTGCCATTT................................................................................................. 25 3 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCTTTT....................................................... 26 3 1 1.00 1 1 0 0
..................................................................................................TGAATGGCGCCACTACGGTTGTGT........................................................... 24 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTACT.......................................................... 23 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTTTGTT.......................................................... 23 3 2 1.00 2 2 0 0
....................................................................................................AATGGCGCCACTAGTGTTGTGA........................................................... 22 2 1 1.00 1 1 0 0
..........................................................AACAACCCTAGGAGGGGGTGCAATTGA................................................................................................ 27 3 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTCGGGTTGTGTT.......................................................... 23 3 1 1.00 1 1 0 0
......................................................................................................TGGCGCCACTAGGGTTGT............................................................. 18 0 1 1.00 1 1 0 0
..................................................................................................TGAATGGCGCCACTCGGGTTGTGT........................................................... 24 2 1 1.00 1 1 0 0
....................................................................................................ATTGGCGCCACTAGGGTTG.............................................................. 19 1 1 1.00 1 0 1 0
....................................................................................................AATGGCGCCACTAGGGATGTG............................................................ 21 1 1 1.00 1 1 0 0
.........................................................AAACAACCCTAGGAGGGGGTGCCATTCA................................................................................................ 28 2 1 1.00 1 1 0 0
...........................................................ACAACCCTAGGAGGGGGTGCATTTT................................................................................................. 25 3 1 1.00 1 1 0 0
.......................................................................................................GGCGCCACTAGGGTTGTGA........................................................... 19 1 1 1.00 1 1 0 0
............................................................CAACCCTAGGAGGGGGTGCCA.................................................................................................... 21 0 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTACGGTTGTGTAA......................................................... 24 3 1 1.00 1 1 0 0
..................................................................................................TGAATGGCGCCACTAGGGTTGAA............................................................ 23 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGTGTTGTGC........................................................... 22 1 1 1.00 1 1 0 0
.....................................................................................................ATGGCGCCACTAGGGTCGTGA........................................................... 21 2 1 1.00 1 1 0 0
....................................................................................................AATGGCGCCACTAGGGTTGTGCAG......................................................... 24 0 1 1.00 1 1 0 0
...........................................................ACAACCCTAGGAGGAGGTGCCATT.................................................................................................. 24 1 1 1.00 1 1 0 0

Anti-sense strand reads

AAATAAGGTTTAAGGTCCACACAAAGGTGCTTCCCGGAGGTCCTTACCGATACGTGACGTGTTGGGATCCTCCCCCACGGTAAGTGTATCTGATATTAACTTACCGCGGTGATCCCAACACGTCACATGTTGGATGTGTTGATATGCGCCGCTAGGGCCGTATTTCTTAATTACATAATTA
********************************************..((...((((((((((((((((((.....(((((((((((..((.....))..))))))))))).))))))))))))))))))...))....********************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:51 PM