ID:

rno-mir-6325

 Coordinate:

chr11:36729251-36729391 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-38.3

Sense Strand Reads

TGAGAGAGCAAACCCAGAGACAAGCTGTCCAATGAGAGAGCAGTGTGGGTGTAATTGTGTTTCCTCTTGAACTTGCTGCTGACCTCCGCTGCTGCCAAGAGTCTCCGTCTGGCCTTTCAACTGAACTGAAAGTCAGACAGAGACTCTGCAGGGAGTTCCAGGCCTTCATTGCTAGATGGGGACTGCTGAGACCAGCTTCCTGGACTGAGCAGCAATGGGGTTCTCAGCTCCTCAGGGCTCA
*********************************************************************************..((((.((((.....((((((((.(((((((.(((((.......)))))))))))).))))))))))))))))..........**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
................................................................................................................................AAAGTCAGACAGAGACTCTGCAA.......................................................................................... 23 1 1 4.00 4 4 0
.................................................................................................................................AAGTCAGACAGAGACTCTGCAA.......................................................................................... 22 1 1 3.00 3 3 0
................................................................................................................................AAAGTCAGACAGAGACTCTGTAA.......................................................................................... 23 2 2 1.00 2 2 0
................................................................................................................................AAAGTCAGACAGAGACTCTGCAGT......................................................................................... 24 1 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGCCTCTGCAGA......................................................................................... 24 2 1 1.00 1 1 0
.................................................................................................................................AAGTCAGACAGAGACTCTGCAGA......................................................................................... 23 1 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGCAGA......................................................................................... 24 1 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGCA........................................................................................... 22 0 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGTTG.......................................................................................... 23 2 1 1.00 1 1 0
................................................................................................AAGAGTCTCCGTCTGGCCTTTCA.......................................................................................................................... 23 0 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGA............................................................................................ 21 1 1 1.00 1 0 1
................................................................................................................................AAAGTCAGACAGAGACTCTGCAAT......................................................................................... 24 2 2 1.00 2 2 0
................................................................................................................................AAAGTCAGACAGAGACTCTGT............................................................................................ 21 1 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGCAG.......................................................................................... 23 0 1 1.00 1 1 0
................................................................................................AAGAGTCTCCGTCTGGCCTTTAA.......................................................................................................................... 23 1 1 1.00 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGCTAT......................................................................................... 24 3 5 0.20 1 1 0
................................................................................................................................AAAGTCAGACAGAGACTCTGTTA.......................................................................................... 23 3 13 0.08 1 1 0

Anti-sense strand reads

ACTCTCTCGTTTGGGTCTCTGTTCGACAGGTTACTCTCTCGTCACACCCACATTAACACAAAGGAGAACTTGAACGACGACTGGAGGCGACGACGGTTCTCAGAGGCAGACCGGAAAGTTGACTTGACTTTCAGTCTGTCTCTGAGACGTCCCTCAAGGTCCGGAAGTAACGATCTACCCCTGACGACTCTGGTCGAAGGACCTGACTCGTCGTTACCCCAAGAGTCGAGGAGTCCCGAGT
****************************************************************************..((((.((((.....((((((((.(((((((.(((((.......)))))))))))).))))))))))))))))..........********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:33 PM