ID:

rno-mir-6317-1

 Coordinate:

chr1:259080675-259080801 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-55.3 -55.3 -55.1 -55.1
mature
  1. chr1:259080746-259080767 -
  2. chr1:259665539-259665560 -
star

Sense Strand Reads

CTCACCAGAGGAGAAACCTGATGAAATGGCTGAGAGAACCTGGAAGAAAGAAAGACCTCTAGTCTCCTGCTTGCCTTCTGCTGCAGTGAACCTGAGAGAAAGGCTCGAGCAATTAGGTTGGGGCCTTACTCACAGTCTCACTGGAGACATCGGGTTATTCTAGGTGGATTCAGAAGGCAACATCAAGTGCTGCTCAGTGGCTCTAGACTGAAAAATGTCAAACATGA
***********************************.....(((............(((((((((.((((...((((..((((.((((((..(((.(((.(((((((.(((......))).))))))).))).)))..)))))).)).))..)))).....))))..)))).))).))............)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
....................................................................................AGTGAACCTGAGAGAAAGGCTC......................................................................................................................... 22 0 2 0.50 1 1

Anti-sense strand reads

GAGTGGTCTCCTCTTTGGACTACTTTACCGACTCTCTTGGACCTTCTTTCTTTCTGGAGATCAGAGGACGAACGGAAGACGACGTCACTTGGACTCTCTTTCCGAGCTCGTTAATCCAACCCCGGAATGAGTGTCAGAGTGACCTCTGTAGCCCAATAAGATCCACCTAAGTCTTCCGTTGTAGTTCACGACGAGTCACCGAGATCTGACTTTTTACAGTTTGTACT
***********************************.....(((............(((((((((.((((...((((..((((.((((((..(((.(((.(((((((.(((......))).))))))).))).)))..)))))).)).))..)))).....))))..)))).))).))............)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528818
Adult_testes_Mili_IP
.....................................................................................................................................................................GCTAAGTCTTGCGTTGTAG........................................... 19 2 9 0.22 2 2

Generated: 04/30/2015 at 05:33 PM