ID:

rno-mir-6316

 Coordinate:

chr1:278298675-278298775 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-43.6 -43.1 -43.1
mature
  1. chr1:104439080-104439096 +
  2. chr1:206919369-206919385 -
  3. chr1:278298678-278298694 +
  4. chr1:278762558-278762574 +
  5. chr11:16659439-16659455 -
  6. chr18:60915646-60915662 -
  7. chr18:62791314-62791330 -
  8. chr2:141612564-141612580 +
  9. chr5:114858941-114858957 -
  10. chr9:111255562-111255578 +
  11. chrX:134654931-134654947 +
star

Sense Strand Reads

GGTCTCTGCCTTATGTAAGGTTCTAGAAGACCAACAACTAAAGTCCTCTGACATCCACATGTCTGTCTCTGTGGCACACAGGTGCATGCATGTGTGCTCTGACTTTCACATGTCTGTCTCTGTGGCACACAGATGCATGCACGTGCACACACACATACAGAGAATTGTTTTTTCAAAGACTATCAAACTAGAGGGGCTATT
***********************************..........(((((.....(((.(((.(((.((((((((.((((((.(((.(((((((............))))))).))).)))))))).)))))).))).))).)))............)))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528817
Adult_testes
.....................................................TCCACATGTCTGTCTCT................................................................................................................................... 17 0 11 0.09 1 1

Anti-sense strand reads

CCAGAGACGGAATACATTCCAAGATCTTCTGGTTGTTGATTTCAGGAGACTGTAGGTGTACAGACAGAGACACCGTGTGTCCACGTACGTACACACGAGACTGAAAGTGTACAGACAGAGACACCGTGTGTCTACGTACGTGCACGTGTGTGTGTATGTCTCTTAACAAAAAAGTTTCTGATAGTTTGATCTCCCCGATAA
***********************************..........(((((.....(((.(((.(((.((((((((.((((((.(((.(((((((............))))))).))).)))))))).)))))).))).))).)))............)))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:32 PM