ID:

rno-mir-6315

 Coordinate:

chr1:221433993-221434093 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.9 -42.7 -42.3 -42.3

Sense Strand Reads

AACTTCAGCGCACGCATCAGCGCCACACTACAGGACCGACACGAGCGCATCACCAAGCTAGCAGGTAGGCTCTGGACAGGACAGGCCCTGAGCCAGCCACCGAGCTCTGCAGCTCACGTGCCCTTCCTGTCCTCTAGGGGTCCATGCACTACTGCGGAAGCTGCAGTTCCTGTTCGAGCTGCCTTCGCGCCTCACCAAGTG
***********************************......................((.((((((((((..(((((((((((((....(((...((.((.(((((....)))))..)))).)))))))))))......))))).)).))))........))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
.................................................................................................................TCACGTGCCCTTCCTGTCCTCTAT................................................................ 24 1 1 2.00 2 2
......................................................................TCTGGACAGGACAGGCCCTGAAAA........................................................................................................... 24 3 1 2.00 2 2
......................................................................TCTGGACAGGACAGGCCCTGAGC............................................................................................................ 23 0 1 2.00 2 2
......................................................................TCTGGACAGGACAGGCCCTGAGT............................................................................................................ 23 1 1 1.00 1 1
......................................................................TCTGGACAGGACAGGCCCTGATA............................................................................................................ 23 2 1 1.00 1 1
......................................................................TCTGGACAGGGCAGGCCCTGATA............................................................................................................ 23 3 9 0.11 1 1

Anti-sense strand reads

TTGAAGTCGCGTGCGTAGTCGCGGTGTGATGTCCTGGCTGTGCTCGCGTAGTGGTTCGATCGTCCATCCGAGACCTGTCCTGTCCGGGACTCGGTCGGTGGCTCGAGACGTCGAGTGCACGGGAAGGACAGGAGATCCCCAGGTACGTGATGACGCCTTCGACGTCAAGGACAAGCTCGACGGAAGCGCGGAGTGGTTCAC
***********************************......................((.((((((((((..(((((((((((((....(((...((.((.(((((....)))))..)))).)))))))))))......))))).)).))))........))))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:31 PM