ID:

rno-mir-628

Coordinate:

chr8:79679458-79679541 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TTGTTTCTTCCTGTGAAGGAGCAGGGAGACTGTACCTTAGCATAGGGGAGAGCTGTTGTGTCGCTTCCTCATGCTGACATATTTACGAGAGGGTGCAATTCATAACCTTCTGGTAAGAGTGGCAGTTGAGGGGTTGGGGATTTAGCTCAGCGGAAGAGCGCTTGCCTAGCGAGCGCAAGGGCCT
***********************************..............((((((.....(((.(((((((.((((.(((.(((((.(((((((..........))))))).))))).))).))))))))))).))).....)))))).***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528818
Adult_testes_Mili_IP
.................................................................................................................................GGGGTTGGGGATTTAGCTCAGCGGAAGAGCGCG...................... 33 1 20 0.90 18 18
.................................................................................................................................GGGGTTGGGGATTTAGCTCAGCGGACG............................ 27 1 20 0.10 2 2
.................................................................................................................................GGGGTTGGGGCTTTAGCTCAGCGGAAGAGGGCG...................... 33 3 20 0.05 1 1
.................................................................................................................................GGGGATGGGGATTTAGCTCAGCGGAAGAGCGCG...................... 33 2 20 0.05 1 1

Anti-sense strand reads

AACAAAGAAGGACACTTCCTCGTCCCTCTGACATGGAATCGTATCCCCTCTCGACAACACAGCGAAGGAGTACGACTGTATAAATGCTCTCCCACGTTAAGTATTGGAAGACCATTCTCACCGTCAACTCCCCAACCCCTAAATCGAGTCGCCTTCTCGCGAACGGATCGCTCGCGTTCCCGGA
***********************************..............((((((.....(((.(((((((.((((.(((.(((((.(((((((..........))))))).))))).))).))))))))))).))).....)))))).***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:49 PM