ID:rno-mir-615 |
Coordinate:chr7:144629019-144629110 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -63.0 | -62.9 | -62.8 |
 |
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 |
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CTGCGGAGCCGGCTCGGCCAGTGTTCGCGGCTCCGGAGGATTCCAGCGACTCGGGAGGGGCGGGAGGGGGGTCCCCGGTGCTCGGATCTCGAGGGTGCTTATTGTTCGGTCCGAGCCTGGGTCTCCCTCTTCCCCCCATCCCCCCTCAGCCCCTCCGGCCGCAGAGTGAAGGCGGCGGTGGAAAGTTTCCTG
***********************************((((......((((...((((((((.((((((((((..(((((.(((((((((..((.(((....))).)).))))))))))))))..)))))))))))))).))))...)).)).))))..*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAT........................................................... | 24 | 2 | 1 | 86.00 | 86 | 86 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAA........................................................... | 24 | 2 | 1 | 81.00 | 81 | 81 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTT........................................................... | 24 | 2 | 1 | 63.00 | 63 | 63 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTT............................................................ | 23 | 1 | 1 | 63.00 | 63 | 63 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTA............................................................ | 23 | 1 | 1 | 38.00 | 38 | 38 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAA............................................................ | 23 | 2 | 1 | 32.00 | 32 | 32 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTA........................................................... | 24 | 2 | 1 | 27.00 | 27 | 27 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAAA.......................................................... | 25 | 3 | 1 | 24.00 | 24 | 23 | 0 | 1 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTTT.......................................................... | 25 | 3 | 1 | 23.00 | 23 | 23 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTAT.......................................................... | 25 | 3 | 1 | 23.00 | 23 | 23 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTT............................................................. | 22 | 0 | 1 | 22.00 | 22 | 22 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCT.............................................................. | 21 | 0 | 1 | 21.00 | 21 | 21 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAT............................................................ | 23 | 2 | 1 | 21.00 | 21 | 21 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTAA.......................................................... | 25 | 3 | 1 | 16.00 | 16 | 16 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTGA........................................................... | 24 | 2 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAGT.......................................................... | 25 | 3 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTGT........................................................... | 24 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAAA........................................................... | 24 | 3 | 3 | 5.67 | 17 | 17 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAAT.......................................................... | 25 | 3 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAG........................................................... | 24 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTTT........................................................... | 23 | 2 | 2 | 4.50 | 9 | 9 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTC............................................................... | 20 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTA............................................................. | 22 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTATT........................................................... | 24 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTATT.......................................................... | 25 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................................................................ATCCGAGCCTGGGTCTCCCTCTTT............................................................ | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................................................................ATCCGAGCCTGGGTCTCCCTCTTTA........................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTCTA.......................................................... | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAAG.......................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCT.............................................................. | 20 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTAA........................................................... | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTATA.......................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTTA.......................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTG........................................................... | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTT............................................................. | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCAA............................................................. | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTAT........................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTTTT............................................................. | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTA............................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................................................................ATCCGAGCCTGGGTCTCCCTCTTTT........................................................... | 25 | 3 | 2 | 2.00 | 4 | 4 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAAT........................................................... | 24 | 3 | 2 | 2.00 | 4 | 4 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCAT............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGCCTCCCTCTTAT........................................................... | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTAGA.......................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTC............................................................ | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAAG........................................................... | 24 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTAAA.......................................................... | 24 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCATAA........................................................... | 24 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCCCCCTCTTTT........................................................... | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TCAGAGCCTGGGTCTCCCTCTTA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGATCTCCCTCTTA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTACT........................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTGGTC......................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCAGAGCCTGGGTCTCCCTCT.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCATGGGTCTCCCTCTTAT........................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTCA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTAAT.......................................................... | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTAG........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTCA........................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTT............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTCA.......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCACCCTCTTTA........................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................GGGGTCCGAGCCTGGGTCTCCCTCTTT............................................................ | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTGT........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................ATCCGAGCCTGGGTCTCCCTCTTGA........................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTGT.......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTTAT.......................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTAT.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAGA........................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCAAGCCTGGGTCTCCCTCTT............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTTTCCCTCTT............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTTT.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTTTCCCTCTTA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGCCTCCCTCTT............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCATA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTTATT.......................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTATC.......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGGGCCTGGGTCTCCCTCT.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCAGAGCCTGGGTCTCCCTCTTAC........................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCACCCTCTTAA........................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTATA........................................................... | 24 | 3 | 5 | 0.80 | 4 | 4 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTATCCCTCTTAT........................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCATTA........................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTTTAA............................................................ | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTAGT........................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTAA............................................................ | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCAGAGCCTGGGTCTCCCTCTAAC........................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTTTAG.......................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTTTA............................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCACTTAA........................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .............................................................................................................TACGAGCCTGGGTCTCCCTCTAT............................................................ | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .............................................................................................................GCCGAGCCTGGGTCTCCCTCTTGT........................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTGAA........................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCGGAGCCTGGGTCTCCCTCTTAT........................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCTGTT........................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTCTCCCTCAAT............................................................ | 23 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGGTCTCCCTCTAAT........................................................... | 23 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .............................................................................................................ACCGAGCCTGGGTCTCCCTCTTTT........................................................... | 24 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCAGAGCCTGGGTCTCCCTCTAGC........................................................... | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCTGGGTTTCCCTCTTAT........................................................... | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .............................................................................................................CCCGAGCCTGGGTCTCCCTCTAT............................................................ | 23 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .............................................................................................................CCCGAGCCTGGGTCTCCCTCTAA............................................................ | 23 | 3 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCTGAGCCTGGGTCTCCCTCTTAT........................................................... | 24 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCTGAGCCTGGGTCTCCCTCTTTT........................................................... | 24 | 3 | 9 | 0.11 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CCGAGCCTGGCTCTCCCTCTTAA........................................................... | 23 | 3 | 10 | 0.10 | 1 | 1 | 0 | 0 |
| .............................................................................................................TCCGAGCCAGGGTCTCCCTCTTTA........................................................... | 24 | 3 | 12 | 0.08 | 1 | 1 | 0 | 0 |
|
GACGCCTCGGCCGAGCCGGTCACAAGCGCCGAGGCCTCCTAAGGTCGCTGAGCCCTCCCCGCCCTCCCCCCAGGGGCCACGAGCCTAGAGCTCCCACGAATAACAAGCCAGGCTCGGACCCAGAGGGAGAAGGGGGGTAGGGGGGAGTCGGGGAGGCCGGCGTCTCACTTCCGCCGCCACCTTTCAAAGGAC
***********************************((((......((((...((((((((.((((((((((..(((((.(((((((((..((.(((....))).)).))))))))))))))..)))))))))))))).))))...)).)).))))..*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:49 PM