ID:

rno-mir-592

 Coordinate:

chr4:55182370-55182465 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.4 -39.9 -39.6 -39.6

Sense Strand Reads

CTGCCCTTCCCTGGGGCCAGGGTGTGGGAGTGCTGATGTAATTAATTTCATGATATTATGCCATGGCATTGTGTCAATATGCGATGATGTGTTGTGATGGCACAGCGTCATCACGTGGTGACGCAACATCATGACGTAAGACATCACATCGCCAATTAAAGAGGTGGTTCCGCGAGGTTTTAAGACTGAGCAGCTA
***********************************......(((((....((((.(((((.(((((..((((((((.((((.((((((((..(((....)))..)))))))).)))).))))))))..))))).)))))...))))........))).)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
....................................................................TTGTGTCAATATGCGATGATGT.......................................................................................................... 22 0 1 9.00 9 9 0
...................................................................ATTGTGTCAATATGCGATGATGTTT........................................................................................................ 25 1 1 3.00 3 3 0
....................................................................TTGTGTCAATATGCGATGATGTT......................................................................................................... 23 1 1 2.00 2 2 0
...................................................................ATTGTGTCAATATGCGATGATGT.......................................................................................................... 23 0 1 2.00 2 2 0
....................................................................TTGTGTCAATATGCGATGATGTAG........................................................................................................ 24 2 1 1.00 1 1 0
....................................................................TTGTGTCAATATGCGCTGATGT.......................................................................................................... 22 1 1 1.00 1 0 1

Anti-sense strand reads

GACGGGAAGGGACCCCGGTCCCACACCCTCACGACTACATTAATTAAAGTACTATAATACGGTACCGTAACACAGTTATACGCTACTACACAACACTACCGTGTCGCAGTAGTGCACCACTGCGTTGTAGTACTGCATTCTGTAGTGTAGCGGTTAATTTCTCCACCAAGGCGCTCCAAAATTCTGACTCGTCGAT
***********************************......(((((....((((.(((((.(((((..((((((((.((((.((((((((..(((....)))..)))))))).)))).))))))))..))))).)))))...))))........))).)).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:44 PM