ID:

rno-mir-544

 Coordinate:

chr6:133879169-133879246 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-32.2 -31.8 -31.7

Sense Strand Reads

TTGGTTAGGGTAGGGGCTTTCAAACTGCTCAATGCGGCTAAGATATTCGTCACCTAGGGATCTTGTTAAAAAGCAGATTCTGATTGAGGGACCAAGATTCTGCATTTTTAGCAAGCTCTCAAGTGATGCTAATGCTGCCGGTCTGTGGACAACACTCGTAGCCACTGGGGGCTGGAGG
*********************************************..((((((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..))))))....********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
................................................................................................ATTCTGCATTTTTAGCAAGCTTT........................................................... 23 1 1 9.00 9 9
................................................................................................ATTCTGCATTTTTAGCAAGCT............................................................. 21 0 1 3.00 3 3
................................................................................................ATTCTGCATTTTTAGCAAGCTTTA.......................................................... 24 2 1 2.00 2 2
................................................................................................ATTCTGCATTTTTAGCAAGCTT............................................................ 22 1 1 2.00 2 2
................................................................................................ATTCTGCATTTTTAGCAAGCTAT........................................................... 23 1 1 1.00 1 1
............................................................TCTTGTTAAAAAGCAGATTCT................................................................................................. 21 0 1 1.00 1 1
................................................................................................ATTCTGCATTTTTAGCAAGCTTA........................................................... 23 2 1 1.00 1 1
................................................................................................ATTCTGCATTTTTCGCAAGCTTT........................................................... 23 2 1 1.00 1 1
................................................................................................ATTCTGCATTTTTAGCAAGCTTAA.......................................................... 24 3 5 1.00 5 5
................................................................................................ATTCTGCATTTTTTGCAAGCT............................................................. 21 1 2 0.50 1 1
................................................................................................ATTCTGCATTTTTAGCAAGCTTG........................................................... 23 2 2 0.50 1 1
................................................................................................ATTCTGCATTATTAGCAAGCTTT........................................................... 23 2 3 0.33 1 1
...............................................................................................AATTCTGCATTTTTAGCAAGCTT............................................................ 23 2 5 0.20 1 1
...............................................................................................AATTCTGCATTTTTAGCAAGCTAA........................................................... 24 3 6 0.17 1 1

Anti-sense strand reads

AACCAATCCCATCCCCGAAAGTTTGACGAGTTACGCCGATTCTATAAGCAGTGGATCCCTAGAACAATTTTTCGTCTAAGACTAACTCCCTGGTTCTAAGACGTAAAAATCGTTCGAGAGTTCACTACGATTACGACGGCCAGACACCTGTTGTGAGCATCGGTGACCCCCGACCTCC
**********************************************..((((((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..))))))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:48 PM