ID:

rno-mir-541

 Coordinate:

chr6:133892655-133892744 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.3 -36.1

Sense Strand Reads

ACCAGTCTCTTGCCGAGCTACAGCAAGGCTAGAAGCCTGTGTGAACTCTTGCCAAAATCAGAGAAGGGATTCTGATGTTGGTCACACTCCAAGAATTTTAAAATGAGTGGCGAACACAGAATCCATACTCTGCTTATGGCCTAAGTCAATGGATCCTGACCCTTACTGGATAGCCCTCTCTATGACGTGC
************************************************..((((.((.(((((...((((((((.((((.(((((.....................))))).))))))))))))...))))).)).))))...*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
...............................................................AAGGGATTCTGATGTTGGTCACACT...................................................................................................... 25 0 1 1334.00 1334 1327 5 2
...............................................................AAGGGATTCTGATGTTGGTCACAC....................................................................................................... 24 0 1 675.00 675 675 0 0
...............................................................AAGGGATTCTGATGTTGGTCACA........................................................................................................ 23 0 1 419.00 419 418 0 1
...............................................................AAGGGATTCTGATGTTGGTCACACTC..................................................................................................... 26 0 1 324.00 324 324 0 0
...............................................................AAGGGATTCTGATGTTGGTCAC......................................................................................................... 22 0 1 199.00 199 186 10 3
...............................................................AAGGGATTCTGATGTTGGTCACACTCT.................................................................................................... 27 1 1 147.00 147 146 0 1
...............................................................AAGGGATTCTGATGTTGGTCACAA....................................................................................................... 24 1 1 71.00 71 71 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACA...................................................................................................... 25 1 1 62.00 62 62 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAT....................................................................................................... 24 1 1 46.00 46 46 0 0
...............................................................AAGGGATTCTGATGTTGGTCACT........................................................................................................ 23 1 1 42.00 42 39 2 1
...............................................................AAGGGATTCTGATGTTGGTCACACTT..................................................................................................... 26 1 1 42.00 42 42 0 0
................................................................AGGGATTCTGATGTTGGTCACACT...................................................................................................... 24 0 1 41.00 41 41 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCA.................................................................................................... 27 1 1 35.00 35 35 0 0
...............................................................AAGGGATTCTGATGTTGGTCA.......................................................................................................... 21 0 1 32.00 32 31 0 1
................................................................AGGGATTCTGATGTTGGTCACAC....................................................................................................... 23 0 1 29.00 29 29 0 0
.........................................................................................................AGTGGCGAACACAGAATCCATAC.............................................................. 23 0 1 23.00 23 22 0 1
...............................................................AAGGGATTCTGATGTTGGTCACACTAT.................................................................................................... 27 2 1 22.00 22 22 0 0
.........................................................................................................AGTGGCGAACACAGAATCCATACT............................................................. 24 0 1 19.00 19 18 0 1
...............................................................AAGGGATTCTGATGTTGGTCACACTCTT................................................................................................... 28 2 1 19.00 19 19 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAAT...................................................................................................... 25 1 1 18.00 18 18 0 0
...............................................................AAGGGATTCTGATGTTGGT............................................................................................................ 19 0 1 17.00 17 16 0 1
...............................................................AAGGGATTCTGATGTTGGTCAAACT...................................................................................................... 25 1 1 16.00 16 16 0 0
...............................................................AAGGGATTCTGATGTTGGTCAA......................................................................................................... 22 1 1 16.00 16 15 1 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCTAT.................................................................................................. 29 2 1 13.00 13 13 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAAA...................................................................................................... 25 2 1 12.00 12 12 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTT....................................................................................................... 24 2 1 11.00 11 11 0 0
...............................................................AAGGGATTCTGATGTTGGTCAT......................................................................................................... 22 1 1 11.00 11 11 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCTTT.................................................................................................. 29 3 1 11.00 11 11 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACAC....................................................................................................... 25 1 1 10.00 10 10 0 0
.........................................................................................................AGTGGCGAACACAGAATCCAT................................................................ 21 0 1 10.00 10 10 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACACT...................................................................................................... 26 1 1 9.00 9 9 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCAT................................................................................................... 28 2 1 9.00 9 9 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTA..................................................................................................... 26 1 1 9.00 9 9 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAA........................................................................................................ 23 1 1 9.00 9 9 0 0
...............................................................AAGGGATTCTGATGTTGGTCACATT...................................................................................................... 25 1 1 8.00 8 8 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTTT.................................................................................................... 27 2 1 8.00 8 8 0 0
................................................................AGGGATTCTGATGTTGGTCAC......................................................................................................... 21 0 1 8.00 8 8 0 0
...............................................................AATGGATTCTGATGTTGGTCACACTC..................................................................................................... 26 1 1 7.00 7 7 0 0
...............................................................AAGGGATTCTGATGTTGGTCATA........................................................................................................ 23 1 1 7.00 7 7 0 0
.................................................................GGGATTCTGATGTTGGTCACACT...................................................................................................... 23 0 1 7.00 7 7 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACAT..................................................................................................... 26 2 1 7.00 7 7 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAAA....................................................................................................... 24 2 1 6.00 6 6 0 0
..........................................................................................................GTGGCGAACACAGAATCCATACT............................................................. 23 0 1 6.00 6 6 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCAA................................................................................................... 28 1 1 6.00 6 6 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCC.................................................................................................... 27 0 1 6.00 6 6 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTAA.................................................................................................... 27 2 1 6.00 6 6 0 0
...............................................................AAGGGATTCTGATGTTGGTCATACT...................................................................................................... 25 1 1 6.00 6 6 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTTTT................................................................................................... 28 3 1 5.00 5 5 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACG...................................................................................................... 25 1 1 5.00 5 5 0 0
.........................................................................................................AGTGGCGAACACAGAATCCATAT.............................................................. 23 1 1 5.00 5 5 0 0
...............................................................AAGGGATTCTGATGTTGGCCACACT...................................................................................................... 25 1 1 5.00 5 5 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTA....................................................................................................... 24 2 1 5.00 5 5 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACAAT.................................................................................................... 27 3 1 5.00 5 5 0 0
................................................................AGGGATTCTGATGTTGGTCACACTC..................................................................................................... 25 0 1 5.00 5 5 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACAA..................................................................................................... 26 2 1 5.00 5 5 0 0
...............................................................AAGGGATTCTGATGTTGGTCATT........................................................................................................ 23 2 2 4.50 9 9 0 0
...............................................................AAGGGATTCTGATGTTGGTCACG........................................................................................................ 23 1 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCG.................................................................................................... 27 1 1 4.00 4 2 2 0
.........................................................................................................AGTGGCGAACACAGAATCCATACA............................................................. 24 1 1 4.00 4 4 0 0
................................................................AGGGATTCTGATGTTGGTCACA........................................................................................................ 22 0 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATATTGGTCACACT...................................................................................................... 25 1 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAAC....................................................................................................... 24 1 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGACGTTGGTCACACT...................................................................................................... 25 1 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCCA................................................................................................... 28 0 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCACGT....................................................................................................... 24 2 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTAT...................................................................................................... 25 2 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTTT...................................................................................................... 25 2 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTC........................................................................................................... 20 0 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACACT...................................................................................................... 25 1 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAACTC..................................................................................................... 26 1 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACA........................................................................................................ 23 1 1 4.00 4 4 0 0
.................................................................GGGATTCTGATGTTGGTCACAC....................................................................................................... 22 0 1 4.00 4 4 0 0
...............................................................AAGGGATTCTGGTGTTGGTCACACT...................................................................................................... 25 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACAC....................................................................................................... 24 1 1 3.00 3 3 0 0
................................................................AGGGATTCTGATGTTGGTCACAAA...................................................................................................... 24 2 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACC...................................................................................................... 25 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATGTTGGACACACT...................................................................................................... 25 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCTTA.................................................................................................. 29 2 1 3.00 3 3 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACACTC..................................................................................................... 27 1 1 3.00 3 3 0 0
.........................................................................................................AGTGGCGAACACAGAATCCATAA.............................................................. 23 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATGTTGGTAA.......................................................................................................... 21 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATCTTGGTCACA........................................................................................................ 23 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATGTTGGTCCCACT...................................................................................................... 25 1 1 3.00 3 3 0 0
...............................................................AAGGGATTCTGATGTTGGTCAGACT...................................................................................................... 25 1 1 3.00 3 3 0 0
...............................................................CAGGGATTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 3.00 3 3 0 0
..............................................................AAAGGGATTCTGATGTTGGTCAA......................................................................................................... 23 2 1 3.00 3 3 0 0
.................................................................GGGATTCTGATGTTGGTCACACTCT.................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGCCACAC....................................................................................................... 24 1 1 2.00 2 2 0 0
................................................................AGGGATTCTGATGTTGGTCAT......................................................................................................... 21 1 1 2.00 2 2 0 0
..................................................................GGATTCTGATGTTGGTCACAC....................................................................................................... 21 0 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCAGA........................................................................................................ 23 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATCTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATCTTGGTCACACTCA.................................................................................................... 27 2 1 2.00 2 2 0 0
...............................................................AATGGATTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
.........................................................TCAAAAAAGGGATTCTGATGTTGGTCACACTC..................................................................................................... 32 2 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACCCTC..................................................................................................... 26 2 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCACATA...................................................................................................... 25 2 1 2.00 2 2 0 0
..................................................................GGATTCTGATGTTGGTCACAA....................................................................................................... 21 1 1 2.00 2 2 0 0
................................................................AGGGATTCTGATGTTGGTCACACC...................................................................................................... 24 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATTTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATATTGGTCACACTC..................................................................................................... 26 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCCGATGTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................ACGGGATTCTGATGTTGGTCACACTC..................................................................................................... 26 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAACTCT.................................................................................................... 27 2 1 2.00 2 2 0 0
.................................................................GGGATTCTGATGTTGGTCAC......................................................................................................... 20 0 1 2.00 2 2 0 0
...............................................................AAGGGATTCTCATGTTGGTCACAC....................................................................................................... 24 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGATGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGTTGTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
..................................................................GGATTCTGATGTTGGTCAC......................................................................................................... 19 0 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGCTCACAC....................................................................................................... 24 1 1 2.00 2 1 0 1
..............................................................AAAGGGATTCTGATGTTGGTCACACA...................................................................................................... 26 2 1 2.00 2 2 0 0
...............................................................AAGGGTTTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGATGGTCACAC....................................................................................................... 24 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACAC..................................................................................................... 26 1 1 2.00 2 2 0 0
.........................................................................................................AGTGGCGAACACAGAATCCATA............................................................... 22 0 1 2.00 2 2 0 0
...............................................................AAGGGCTTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAAG...................................................................................................... 25 2 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTAA...................................................................................................... 25 3 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAG........................................................................................................ 23 2 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCATAT....................................................................................................... 24 2 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGTTGTTGGTCACA........................................................................................................ 23 1 1 2.00 2 2 0 0
...............................................................AAGGGATTGTGATGTTGGTCAC......................................................................................................... 22 1 1 2.00 2 2 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACA........................................................................................................ 24 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTA........................................................................................................... 20 1 1 2.00 2 2 0 0
................................................................AGGGATTCTGATGTTGGTCACAT....................................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGG............................................................................................................. 18 0 1 2.00 2 0 0 2
...............................................................AAGGGATTCTGATGTTGGTCACAG....................................................................................................... 24 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGGCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACACA...................................................................................................... 25 2 1 2.00 2 2 0 0
...............................................................AACGGATTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 2.00 2 2 0 0
..........................................................................................................GTGGCGAACACAGAATCCATACA............................................................. 23 1 1 2.00 2 2 0 0
........................................................................................................AAGTGGCGAACACAGAATCCATAC.............................................................. 24 1 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTTA...................................................................................................... 25 3 1 2.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTAAA......................................................................................................... 22 2 2 1.50 3 3 0 0
...............................................................AAGGGATTCTGATGTTGATCACACTC..................................................................................................... 26 1 1 1.00 1 1 0 0
................................................................AGGAATTCTGATGTTGGTCACACTC..................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCCCA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACTC....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTTACT........................................................................................................ 23 2 1 1.00 1 0 1 0
...............................................................AAGGGATTCTAATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGACAAA........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAT........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AATGGATTCTGATGTTGGGCACACTC..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCCCAC....................................................................................................... 24 2 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACT........................................................................................................ 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGAAGTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCACG........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTTGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAGAC....................................................................................................... 24 1 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACGT....................................................................................................... 25 3 1 1.00 1 1 0 0
......................................................................TCTGATGTTGGTCACACT...................................................................................................... 18 0 2 1.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTAAT................................................................................................... 28 3 1 1.00 1 1 0 0
...........................................................AAAGAAGGGATTCTGATGTTGGTCAC......................................................................................................... 26 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACGT..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTAACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGACACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTATGATGTTGGTCAGACT...................................................................................................... 25 2 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACAAT...................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGCGATTCTGATGTTGGTCACACTT..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCATAAA...................................................................................................... 25 3 1 1.00 1 1 0 0
................................................................AGGGATTCTGATGTTGGTCAAA........................................................................................................ 22 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCAC......................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................TAGGGATTCTGATGTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGAATTCTGATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...........................................................................................................TGGCGAACACAGAATCCATAT.............................................................. 21 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCACACA...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCAAACTC..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTCGTCCCACTCAA................................................................................................... 28 3 1 1.00 1 1 0 0
...................................................................GATTCTGATGTTGGTCACAC....................................................................................................... 20 0 1 1.00 1 1 0 0
...............................................................AAGGAATTCTGATGTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATATTGGTCACACT...................................................................................................... 26 2 1 1.00 1 1 0 0
................................................................AGGGATTCTGATGTTGGTCACACTCA.................................................................................................... 26 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTCGTCACTCT...................................................................................................... 25 3 1 1.00 1 1 0 0
...............................................................AATGGATTCTGATGTTGGTCACAA....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAACTAT.................................................................................................... 27 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACGCT...................................................................................................... 25 2 1 1.00 1 1 0 0
................................................................AGGGATTCTGATGTTGGTCACACTAT.................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAACTT..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGATGGTCACACT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGCTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGATGGTCACAA....................................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................................TGGCGAACACAGAATCCATACTT............................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTATGATGTTGGTCAAACT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................CAGGGATTATGATGTTGGTCACACT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGAGATTCTGCTGATGGTCACACT...................................................................................................... 25 3 1 1.00 1 1 0 0
...............................................................ACGGGATTCTGATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATTTTGGACACACTCT.................................................................................................... 27 3 1 1.00 1 1 0 0
.........................................................................................................AGTGGCGAACACAGAATCCATATT............................................................. 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCAC......................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAGT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATCCTGATGTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
..........................................................................................................GTGGCGAACACAGAATCCATAC.............................................................. 22 0 1 1.00 1 1 0 0
...............................................................AACGGATTCTGCTGTTGGTCACAC....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACATTA..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAAAA..................................................................................................... 26 3 1 1.00 1 1 0 0
...............................................................AAGCGATTCTGATGTTGGTCACACTTT.................................................................................................... 27 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACG........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGTTGTTGGTCACACTCT.................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCATACTC..................................................................................................... 26 1 1 1.00 1 1 0 0
................................................................AGGGATTCTGATGTTGGTCACAA....................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGGTGTTGGTCACGCT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTAGGTCACACT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGGCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACATAT..................................................................................................... 26 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAAT....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCACAA....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTTAT................................................................................................... 28 3 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCCCACTCT.................................................................................................... 28 3 1 1.00 1 1 0 0
...............................................................AAGGGATTATGATGTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...................................................................GATTCTGATGTTGGTCAC......................................................................................................... 18 0 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACCCT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGGTGTTGGTCACACTCT.................................................................................................... 27 2 1 1.00 1 1 0 0
................................................................AAGGATTCTGATGTTGGTCACACT...................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTTA.................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACC........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGATTTTGATGTTGGTCATA........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AACGGATTCTGATGTTGGTCACGT....................................................................................................... 24 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTCGTCAAACA...................................................................................................... 25 3 1 1.00 1 1 0 0
...........................................................................................................TGGCGAACACAGAATCCATACT............................................................. 22 0 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCAC......................................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................TAGGGATTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................GAGGGATTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAAAA...................................................................................................... 25 3 2 1.00 2 2 0 0
...............................................................AAGGGATTCTGATGTTGGTCATAAT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGAAGTTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGACACACTT..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGCCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACACTTT.................................................................................................... 28 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACATTATA................................................................................................... 28 3 1 1.00 1 1 0 0
...............................................................AAGGGCTTCTGATGTTGGTCACACTCT.................................................................................................... 27 2 1 1.00 1 0 0 1
............................................................AAAAAGGGATTCTGATGTTGGTCACACTCT.................................................................................................... 30 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGCTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
.................................................................GGGATTCTGATGTTGGTCACAT....................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACATT.................................................................................................... 27 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCCC......................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCATAA....................................................................................................... 24 2 1 1.00 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCACTT....................................................................................................... 25 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTCGT................................................................................................... 28 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTCGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGAGATTCTGATGTTGGTCACAT....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTATGATGTTGGTCACACTCG.................................................................................................... 27 2 1 1.00 1 0 1 0
.........................................................................................................AGTGGCGAACACAGCATCCATAC.............................................................. 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGGCACACTCA.................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGCGATTCTGATGTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGCTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGAGATTCTGATGTTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
..........................................................................................................GTGGCGAACACAGAATCCCTACT............................................................. 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGACACACTA..................................................................................................... 26 2 1 1.00 1 1 0 0
.........................................................................................................AGTGGCGAACACAGAATCCA................................................................. 20 0 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACT........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATCTTGGTCATACT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCACACTCT.................................................................................................... 27 2 1 1.00 1 1 0 0
.............................................................AAAAGGGATTCTGATGTTGGTCATAT....................................................................................................... 26 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATCTTGGTCACAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACACTC..................................................................................................... 26 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCCGATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAGACTCAT................................................................................................... 28 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTAAAA........................................................................................................ 23 2 1 1.00 1 1 0 0
...............................................................AAGGGGTTCTGATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
................................................................AGGGATTCGGATGTTGGTCACAC....................................................................................................... 23 1 1 1.00 1 1 0 0
................................................................AGGGATTCTGATGTTGGTCAA......................................................................................................... 21 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATCTTGGTCACACTT..................................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTCTCT.................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATATTGGTCACAT....................................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTATGATGTTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCATAC....................................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AAGAGATTCTGATGTTGGTCAC......................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGCTGTTGGTCACACTCAA................................................................................................... 28 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCGCACTC..................................................................................................... 26 1 1 1.00 1 1 0 0
...............................................................AAGGGCTTCTGATGTTGGTCAGACT...................................................................................................... 25 2 1 1.00 1 1 0 0
.............................................................ACAAGGGATTCTGATGTTGGTC........................................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAGACTCT.................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTCGGTCACAAT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AACGGATTCTGATGTTGGTC........................................................................................................... 20 1 1 1.00 1 0 0 1
..............................................................AAAGGGATTCTGATGTTGGTCACACTT..................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTCATGTTGGTCACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGTTGTTGGTCACCCT...................................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTTACACT...................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AACGGATTCTGCTGTTGGTCACACTC..................................................................................................... 26 2 1 1.00 1 1 0 0
.........................................................................................................AGTGGCGAACACAGCATCCATACA............................................................. 24 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGACATACT...................................................................................................... 25 2 1 1.00 1 1 0 0
..............................................................TAAGGGATTCTGATGTTGGTCACAC....................................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACACTATT................................................................................................... 28 3 1 1.00 1 1 0 0
...............................................................AAGGGATTATGATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................CAGGGATTCTGATGTTGGTCACA........................................................................................................ 23 1 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCAAACTA..................................................................................................... 26 2 1 1.00 1 1 0 0
.........................................................................................................AGTGGCGAACACAGTATCCATCC.............................................................. 23 2 1 1.00 1 1 0 0
...............................................................ACGGGATTCTGATGTTGGTCACACTCA.................................................................................................... 27 2 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACTAC...................................................................................................... 25 3 1 1.00 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCATTA....................................................................................................... 24 3 4 0.75 3 3 0 0
...............................................................AAGGGATTCTCATGTTGGT............................................................................................................ 19 1 2 0.50 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCACAAAT..................................................................................................... 26 3 2 0.50 1 1 0 0
...............................................................CAGGGATTATGATGTTGGTCACA........................................................................................................ 23 2 2 0.50 1 1 0 0
..............................................................AAAGGGATTCTGATGTTGGTCAAT........................................................................................................ 24 3 2 0.50 1 1 0 0
...............................................................AAGGGATTCTGCTGATGGTCACA........................................................................................................ 23 2 2 0.50 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCCTA........................................................................................................ 23 2 2 0.50 1 1 0 0
.........................................................................GATGTTGGTCACACTC..................................................................................................... 16 0 2 0.50 1 1 0 0
...............................................................GAGGGATTCTGATGTTGGTCACTT....................................................................................................... 24 3 2 0.50 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGACAAAT....................................................................................................... 24 3 2 0.50 1 1 0 0
...............................................................AAGGGATTCTGATGTTGGTCGA......................................................................................................... 22 2 2 0.50 1 1 0 0
...............................................................AAGGGATTCTGGTGTTGGTCACGT....................................................................................................... 24 3 2 0.50 1 1 0 0

Anti-sense strand reads

TGGTCAGAGAACGGCTCGATGTCGTTCCGATCTTCGGACACACTTGAGAACGGTTTTAGTCTCTTCCCTAAGACTACAACCAGTGTGAGGTTCTTAAAATTTTACTCACCGCTTGTGTCTTAGGTATGAGACGAATACCGGATTCAGTTACCTAGGACTGGGAATGACCTATCGGGAGAGATACTGCACG
***********************************************..((((.((.(((((...((((((((.((((.(((((.....................))))).))))))))))))...))))).)).))))...************************************************ 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:48 PM