ID:

rno-mir-494

Coordinate:

chr6:133864370-133864452 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.2 -35.8 -35.8

Sense Strand Reads

CCATCTGGCACTTTGCAGCTGCCTTTGTTTGCTTTCTGACCAGTGCTAATTGATACTTGAAGGAGAGGTTGTCCGTGTTGTCTTCTCTTTATTTATGATGAAACATACACGGGAAACCTCTTTTTTAGTATCAAATCCCACCTGGTAGGCACTCCCTGTCCCTGATGAAGCCTTCAGGGAAGG
**************************************************(((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).)))))))))))))))))))...***********************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..................................................................................................TGAAACATACACGGGAAACCTCT.............................................................. 23 0 1 1112.00 1112 1098 13 1
..................................................................................................TGAAACATACACGGGAAACCTCTAA............................................................ 25 2 1 212.00 212 212 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAT............................................................ 25 1 1 210.00 210 210 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTA............................................................. 24 1 1 193.00 193 193 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTT............................................................. 24 0 1 188.00 188 188 0 0
..................................................................................................TGAAACATACACGGGAAACCTCA.............................................................. 23 1 1 86.00 86 86 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTT............................................................ 25 0 1 79.00 79 78 1 0
..................................................................................................TGAAACATACACGGGAAACCTCAA............................................................. 24 2 1 65.00 65 65 0 0
..................................................................................................TGAAACATACACGGGAAACCTC............................................................... 22 0 1 48.00 48 44 4 0
..................................................................................................TGAAACATACACGGGAAACCTCAT............................................................. 24 1 1 48.00 48 48 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTA............................................................ 25 1 1 43.00 43 43 0 0
...................................................................................................GAAACATACACGGGAAACCTCT.............................................................. 22 0 1 38.00 38 38 0 0
..................................................................................................TGAAACATACACGGGAAACCTAT.............................................................. 23 1 1 35.00 35 35 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAAA........................................................... 26 3 1 35.00 35 35 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAT........................................................... 26 1 1 26.00 26 26 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAG............................................................ 25 2 1 26.00 26 26 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAAT........................................................... 26 2 1 25.00 25 25 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTGA............................................................ 25 2 1 19.00 19 19 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTT........................................................... 26 0 1 19.00 19 18 1 0
..................................................................................................TGAAACATACACGGGAAACCTTT.............................................................. 23 1 1 18.00 18 17 1 0
..................................................................................................TGAAACATACACGGGAAACCTCAAA............................................................ 25 3 1 17.00 17 17 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCT.............................................................. 24 0 1 17.00 17 17 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTATA........................................................... 26 2 1 16.00 16 16 0 0
..................................................................................................TGAAACATACACGGGAAACCTCAAT............................................................ 25 2 1 16.00 16 16 0 0
..................................................................................................TGAAACATACACGGGAAACCT................................................................ 21 0 1 15.00 15 13 2 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAA........................................................... 26 2 1 13.00 13 13 0 0
..................................................................................................TGAAACATACACGGGAAACCTCC.............................................................. 23 1 1 12.00 12 12 0 0
...................................................................................................GAAACATACACGGGAAACCTCTT............................................................. 23 0 1 10.00 10 10 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTATAT.......................................................... 27 2 1 10.00 10 10 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTGT............................................................ 25 1 1 9.00 9 9 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAAAT.......................................................... 27 3 1 9.00 9 9 0 0
...................................................................................................GAAACATACACGGGAAACCTCTAA............................................................ 24 2 1 9.00 9 9 0 0
..................................................................................................TGAAACATACACGGGAAACCTAA.............................................................. 23 2 2 7.50 15 15 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAGA........................................................... 26 3 2 7.50 15 15 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCA............................................................. 24 2 1 7.00 7 7 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTTT.......................................................... 27 0 1 7.00 7 7 0 0
...................................................................................................GAAACATACACGGGAAACCTCTAT............................................................ 24 1 1 7.00 7 7 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTATAAT......................................................... 28 3 1 6.00 6 6 0 0
...................................................................................................GAAACATACACGGGAAACCTCTA............................................................. 23 1 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAAG........................................................... 26 3 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTCAGA............................................................ 25 3 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTT............................................................... 22 1 1 6.00 6 5 1 0
..................................................................................................TGAAACATACACGGGAAACCTCTATAA.......................................................... 27 3 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAC............................................................ 25 2 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTAT.......................................................... 27 1 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTA............................................................... 22 1 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAAGT.......................................................... 27 3 1 6.00 6 6 0 0
..................................................................................................TGAAACATACACGGGAAACCTCATA............................................................ 25 2 1 5.00 5 5 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAGT........................................................... 26 2 1 5.00 5 5 0 0
..................................................................................................TGAAACATACACGGGACACCTCT.............................................................. 23 1 1 5.00 5 5 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTCA............................................................ 25 2 1 5.00 5 5 0 0
...................................................................................................GAAACATACACGGGAAACCTCA.............................................................. 22 1 1 5.00 5 5 0 0
..................................................................................................TGAAACATACACGGGAAACCTCAG............................................................. 24 2 1 4.00 4 4 0 0
................................................................................................AATGAAACATACACGGGAAACCTCTA............................................................. 26 2 1 4.00 4 4 0 0
..................................................................................................TGAAACATCCACGGGAAACCTAT.............................................................. 23 2 1 4.00 4 4 0 0
.................................................................AGGTTGTCCGTGTTGTCTTCTCT............................................................................................... 23 0 1 4.00 4 4 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTATT........................................................... 26 1 1 4.00 4 4 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCT............................................................. 24 1 1 4.00 4 4 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAG........................................................... 26 2 1 4.00 4 4 0 0
..................................................................................................TGAAACATACACGGGAAACCTAG.............................................................. 23 2 1 4.00 4 4 0 0
..................................................................................................TGACACATCCACGGGAAACCTCT.............................................................. 23 2 1 4.00 4 4 0 0
.....................................................................................................AACATACACGGGAAACCTCTTT............................................................ 22 0 1 4.00 4 4 0 0
..................................................................................................TGAAACATACACGGGAAACCTAAA............................................................. 24 3 3 3.33 10 10 0 0
..................................................................................................TGAAACATACATGGGAAACCTCT.............................................................. 23 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTTA.............................................................. 23 2 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGAGAAACCTCT.............................................................. 23 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAAA.......................................................... 27 3 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTG............................................................. 24 1 1 3.00 3 3 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTA............................................................. 25 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTA........................................................... 26 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCAT............................................................ 25 2 1 3.00 3 3 0 0
..................................................................................................TGAAACATACAAGGGAAACCTCT.............................................................. 23 1 1 3.00 3 3 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTA........................................................... 23 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTATAT............................................................ 25 2 1 3.00 3 3 0 0
..................................................................................................TGAACCATACACGGGAAACCTCT.............................................................. 23 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTACA........................................................... 26 3 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTATAG............................................................ 25 3 1 3.00 3 3 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTTA.......................................................... 24 1 1 3.00 3 3 0 0
..................................................................................................TGAAACATACGCGGGAAACCTCTAA............................................................ 25 3 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCAAT........................................................... 26 3 1 3.00 3 3 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTTT.......................................................... 24 0 1 3.00 3 3 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAAT.......................................................... 27 2 1 3.00 3 3 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTAAT........................................................... 27 2 1 2.00 2 2 0 0
...................................................................................................GAAACATACACGGGAAACCTCAAT............................................................ 24 2 1 2.00 2 2 0 0
..................................................................................................TGGCACATACACGGGAAACCTCT.............................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAAACTCTAT............................................................ 25 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGACACCTAT.............................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTAGA............................................................. 24 3 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTAAT............................................................. 24 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACC................................................................. 20 0 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTCAAAT........................................................... 26 3 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAAACTCT.............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGAAACATCCACGGGAAACCTCT.............................................................. 23 1 1 2.00 2 2 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCAA............................................................. 25 2 1 2.00 2 2 0 0
.................................................................................................TTGAAACATACACGGGAAACCTCTAT............................................................ 26 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATCCACGGGAAACCTCTTT............................................................ 25 1 1 2.00 2 2 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTATT......................................................... 25 1 1 2.00 2 2 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTTAA........................................................... 27 2 1 2.00 2 2 0 0
.................................................................................................ATGAAACATACACGGGAAACCT................................................................ 22 0 1 2.00 2 2 0 0
...................................................................................................GAAACATACACGGGAAACCTCTTT............................................................ 24 0 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAAACTCTA............................................................. 24 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAATCTCA.............................................................. 23 2 1 2.00 2 2 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTTAAA.......................................................... 28 3 1 2.00 2 2 0 0
..................................................................................................TGAAACATACGCGGGAAACCTCT.............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGATACATCCACGGGAAACCTCT.............................................................. 23 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACAAGGGAAACCTCTT............................................................. 24 1 1 2.00 2 2 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTAA............................................................ 26 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAAC.................................................................. 19 0 1 2.00 2 1 1 0
..................................................................................................TGAAACATACACGGAAAACCTCT.............................................................. 23 1 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTAA.......................................................... 27 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTGAA........................................................... 26 3 1 2.00 2 2 0 0
...................................................................................................GAAACATACACGGGAAACCTCTTAGT.......................................................... 26 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACTCGGGAAACCTCTAT............................................................ 25 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTTAA............................................................. 24 3 2 2.00 4 4 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTAAA........................................................... 27 3 1 2.00 2 2 0 0
..................................................................................................TGAACCATACACGGGAAACCTCTAT............................................................ 25 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTTAA......................................................... 28 2 1 2.00 2 2 0 0
........................................................................................................ATACACGGGAAACCTCT.............................................................. 17 0 1 2.00 2 1 1 0
..................................................................................................TGAAACATACACGGGAAACCTCCTA............................................................ 25 2 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTATT............................................................. 24 1 1 2.00 2 2 0 0
...................................................................................................GAAACATACACGGGAAACCTCAA............................................................. 23 2 1 2.00 2 2 0 0
................................................................................................AATGAAACATACACGGGAAACCTCT.............................................................. 25 1 1 2.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAGACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
....................................................................................................AAACATACACGGGAAACCTCTA............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATATACGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAGACATACACGGGAAACCTCTTAT........................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTTT.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGCGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAGACATACACGGGAAACCTAT.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACAAGGGAAACCTCTAT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAGCATACACGGGAAACCTCTAT............................................................ 25 2 1 1.00 1 1 0 0
........................................................................................................ATACACGGGAAACCTCTTTTATAT....................................................... 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAATCTCT.............................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCTTA............................................................ 24 1 1 1.00 1 1 0 0
....................................................................................................AAACATACACGGGAAACCTCTTTAAT......................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTTTTTT........................................................... 26 1 1 1.00 1 1 0 0
..................................................................................................CGAAACATACACGGGAAACCTCTA............................................................. 24 2 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCTTAAAT......................................................... 27 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACCGGAAACCTCTT............................................................. 24 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAACCCTCTATAT.......................................................... 27 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCATAATT......................................................... 28 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTATGAT........................................................... 26 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAAGT......................................................... 28 3 1 1.00 1 1 0 0
...............................................................................................TAATGAAACATACACGGGAAACCTC............................................................... 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTG............................................................ 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAAATTA........................................................ 29 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTATATT........................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACTGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCTTTAT......................................................... 28 2 1 1.00 1 1 0 0
..................................................................................................TGCCACATACAGGGGAAACCTCTTT............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGACACATCCACGGGAAACCTCTTT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACCCGGGAAACCTCTAA............................................................ 25 3 2 1.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTCACA............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCGTAT........................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACCCGGGAAACCTCA.............................................................. 23 2 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCATT.............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACGCGGGAAACCTCAT............................................................. 24 2 1 1.00 1 1 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTTG.......................................................... 24 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTAGTAT......................................................... 28 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTGAG........................................................... 26 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAAACTCTAA............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAGACATACACGGGAAACCTCTTT............................................................ 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAGACCAAT.............................................................. 23 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTTTAAT........................................................... 26 3 1 1.00 1 1 0 0
..................................................................................................TGGCACATACACGGGAAACCTCTTT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCATT............................................................ 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACAGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTGAAT............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGATACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGACACCTTTTT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTTTAG............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATATACGGGAAACCTCTAT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTATATTT........................................................ 29 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTATTT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGTCACATACACGGGAAACCTCTC............................................................. 24 3 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTTAT............................................................. 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTTA.......................................................... 27 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTGA........................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTCTAT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACCCGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACAAGGGAAACCTCGAT............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAGA.......................................................... 27 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTATAT......................................................... 28 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCG.............................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTGTT............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTTTA............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCTT............................................................ 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGGAACCTCTT............................................................. 24 1 1 1.00 1 1 0 0
................................................................AAGGTTGTCCGTGTTGTCTTCTCT............................................................................................... 24 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGTGAAACCTCTAA............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGACACATACACGGGAAACCTC............................................................... 22 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACAAGGGAAACCTCA.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCGA............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGACACCTCTATA........................................................... 26 3 1 1.00 1 1 0 0
...............................................................AGAGGTTGTCCGTGTTGTCTTCA................................................................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCTGAAT.......................................................... 26 3 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCTTTAT.......................................................... 26 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCTAG............................................................ 24 2 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTAT............................................................ 26 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATTCACGGGAAACCTCA.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TTAAACATACACGGGAAACCTCTATAT.......................................................... 27 3 1 1.00 1 1 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTAA.......................................................... 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACACACACGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TAAAACATACACGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTTAT............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTGT........................................................... 26 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAAGCTCTA............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACGCGGGAAACCTCTA............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGAGAAACCTCTTTAT.......................................................... 27 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTGT.............................................................. 23 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAACCCTCTA............................................................. 23 2 1 1.00 1 1 0 0
...................................................................................................GAAACATACAGGGGAAACCTCT.............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTC............................................................ 25 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCAATT........................................................... 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACTCGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTATTTA........................................................... 26 3 1 1.00 1 1 0 0
...................................................................................................GAAAAATACACGGGAAACCTCT.............................................................. 22 1 1 1.00 1 1 0 0
.................................................................AGGTTGTCCGTGTTGTCTTCTCA............................................................................................... 23 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGCAAACCTCGAT............................................................ 24 3 1 1.00 1 1 0 0
..................................................................................................TTAAACATACACGGGAAACCTCTT............................................................. 24 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACTCGGGAAACCTCCAT............................................................ 25 3 1 1.00 1 1 0 0
................................................................................................TCTGAAACATACACGGGAAACC................................................................. 22 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTCTAG............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTGTAT............................................................ 25 2 1 1.00 1 1 0 0
.....................................................................................................AACATACACGGGAACCCTCTTTTT.......................................................... 24 1 1 1.00 1 1 0 0
..................................................................................................TGAAATATACACGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGACACATCCACGGGAAACCTCTATT........................................................... 26 3 1 1.00 1 1 0 0
.................................................................................................ATGAAACATAAACGGGAAACCTCTTT............................................................ 26 1 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTTT............................................................ 26 0 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACTGGAAACCTCTAA............................................................ 26 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAAG.......................................................... 27 3 1 1.00 1 1 0 0
................................................................................................AATGAAACATACACGGGAAACCTC............................................................... 24 1 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTATAT.......................................................... 28 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTATTA.......................................................... 27 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTACT........................................................... 26 2 1 1.00 1 1 0 0
...................................................................................................GAAACATACACCGGAAACCTCT.............................................................. 22 1 1 1.00 1 1 0 0
..................................................................................................TGAACCATACACGGGAAACCTCTTA............................................................ 25 2 1 1.00 1 1 0 0
......................................................................................................ACATACACGGGAAACCTCTTATA.......................................................... 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCATAAT.......................................................... 27 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTTGA.......................................................... 27 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACCCGGGAAACCTCTTT............................................................ 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTCAA.......................................................... 27 3 1 1.00 1 1 0 0
................................................................AAGATTGTCCGTGTTGTCTTCTCT............................................................................................... 24 2 1 1.00 1 1 0 0
..................................................................................................TGACACATCCACGGGAAACCTCTA............................................................. 24 3 1 1.00 1 1 0 0
..................................................................................................TGACACATACACGGGACACCTCT.............................................................. 23 2 2 1.00 2 2 0 0
..................................................................................................TGAAACATACACGGGAAACCTGTT............................................................. 24 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACGCGGGAAACCTCTAG............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTAC........................................................... 26 2 1 1.00 1 1 0 0
.........................................................................................................TACACGGGAAACCTCT.............................................................. 16 0 1 1.00 1 1 0 0
..................................................................................................TGCCACATACACGGGAAACCTCT.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTATCA............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGCAACATACAAGGGAAACCTCT.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGACACATACACGGGAAACCTCTCT............................................................ 25 2 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCC.............................................................. 24 1 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTATA........................................................... 27 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACCCGGGAAACCTA............................................................... 22 2 1 1.00 1 1 0 0
.....................................................................................................AACATACACGGGAAACCTCTTTAAA......................................................... 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATTCACGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAACCATACACGGGAAACCTCTTT............................................................ 25 1 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTAA.............................................................. 24 2 1 1.00 1 1 0 0
..................................................................................................TGAAAAATACACGGGAAACCTCTT............................................................. 24 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTTTT............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTAAAT............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACCTACACGGGAAACCTCT.............................................................. 23 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGAAAACCTCTAT............................................................ 25 2 1 1.00 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCTT............................................................. 25 0 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCCATT........................................................... 26 2 1 1.00 1 1 0 0
.................................................................................................TTGAAACATACACGGGAAACC................................................................. 21 1 1 1.00 1 1 0 0
..................................................................................................TGGCACATACACGGGAAACCTCTCT............................................................ 25 3 2 1.00 2 2 0 0
..................................................................................................TGAGACATACACGGGAAACCTCA.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCTTCT........................................................... 26 1 1 1.00 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCCTTCT.......................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTATTTA........................................................... 26 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACAAGGGAAACCTCG.............................................................. 23 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTTTAT............................................................ 25 3 1 1.00 1 1 0 0
..................................................................................................TGAAACATAAACGGGAAACCTCTTT............................................................ 25 1 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTCAGT............................................................ 25 2 1 1.00 1 1 0 0
..................................................................................................TGAAACATACACGGGAAAACTATT............................................................. 24 2 2 0.50 1 1 0 0
..................................................................................................TGAAACATACACGGGAAATCTCTAA............................................................ 25 3 2 0.50 1 1 0 0
..................................................................................................TGAAAAATACACGGGAAACCTCTA............................................................. 24 2 2 0.50 1 1 0 0
..................................................................................................TGAAACATACACGGGAAACCTAAGT............................................................ 25 3 2 0.50 1 1 0 0
..................................................................................................TGACACATACACGGGACACCTC............................................................... 22 2 2 0.50 1 1 0 0
...................................................................................................GAAACATACACGGAAAACATCT.............................................................. 22 2 2 0.50 1 1 0 0
..................................................................................................TGACACATACACGGGACACCTCATT............................................................ 25 3 2 0.50 1 1 0 0
..................................................................................................TGATACATACACGGGAAACCTCTAA............................................................ 25 3 2 0.50 1 1 0 0
...................................................................................................CAAACATACACGGGAAACCTCTAA............................................................ 24 3 2 0.50 1 1 0 0
..................................................................................................TGAAACATACACGGAAAACCTCAA............................................................. 24 3 2 0.50 1 1 0 0
..................................................................................................TGAAACATACACGGGAAAACTATAT............................................................ 25 3 2 0.50 1 1 0 0
.....................................................................................................CACATACACGGGAAACCTCT.............................................................. 20 1 2 0.50 1 0 1 0
..................................................................................................TGTCACATACACGGGAAACCTCAT............................................................. 24 3 2 0.50 1 1 0 0
...................................................................................................GAAACATACACGGGAAACCTCTAGA........................................................... 25 3 2 0.50 1 1 0 0
..................................................................................................TGAAACATCCACGGGAAACCTCTAA............................................................ 25 3 7 0.43 3 3 0 0
.........................................................................................................TACACGGGAAACCTCTAT............................................................ 18 1 3 0.33 1 1 0 0
..................................................................................................TGACACATCCACGGGAAACCTCAT............................................................. 24 3 3 0.33 1 1 0 0
..................................................................................................TGAAACATACACGGGACACCCAT.............................................................. 23 3 3 0.33 1 1 0 0
..................................................................................................CGACACATCCACGGGAAACCTCT.............................................................. 23 3 4 0.25 1 1 0 0
..................................................................................................TGAAACATACATGGGAAACCTCAA............................................................. 24 3 4 0.25 1 1 0 0
..................................................................................................TGAAATATAAAAGGGAAACCTCTTT............................................................ 25 3 4 0.25 1 1 0 0
..................................................................................................TGAAACATACACTGGAAACCTTT.............................................................. 23 2 4 0.25 1 1 0 0
.................................................................................................ATGAAACATACACGGGAAACCTCCAA............................................................ 26 3 5 0.20 1 1 0 0
..................................................................................................TGGCACATACAAGGGAAACCTCT.............................................................. 23 3 5 0.20 1 1 0 0

Anti-sense strand reads

GGTAGACCGTGAAACGTCGACGGAAACAAACGAAAGACTGGTCACGATTAACTATGAACTTCCTCTCCAACAGGCACAACAGAAGAGAAATAAATACTACTTTGTATGTGCCCTTTGGAGAAAAAATCATAGTTTAGGGTGGACCATCCGTGAGGGACAGGGACTACTTCGGAAGTCCCTTCC
***********************************************(((((((.((((((((((((.((((((((((.(((((.........)).)))))).))))))).)))))))))))))))))))...**************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:47 PM