ID:rno-mir-483 |
Coordinate:chr1:215832088-215832160 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
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| -44.1 | -43.7 | -43.6 |
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GGGGCTTCACAGATAGGAGGGCCCCAAGCCCAGCCTCGGACCGTGGGGGAGAGGGGGAAGACGGGAGAAGAGAAGGGAGTGGTTTTTGGGTGCCTCACTCCTCCCCTCCCGTCTTGTTCTCTCCTGCCCTATCTTCCCTTCCTGTCACAGTTCAGCGATGGGGGTTGAGGGTG
******************************************((((((.((.(((((((((((((((..((....((((((((........)))..)))))))..)))))))))...)))))))).))))))***************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| .........................................................AAGACGGGAGAAGAGAAGGGAG.............................................................................................. | 22 | 0 | 1 | 35.00 | 35 | 25 | 10 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGT............................................................................................. | 23 | 0 | 1 | 19.00 | 19 | 19 | 0 | 0 |
| ...............................................................................................CACTCCTCCCCTCCCGTCTTGT........................................................ | 22 | 0 | 1 | 18.00 | 18 | 17 | 0 | 1 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGA............................................................................................. | 23 | 1 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGA............................................................................................... | 21 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAA.............................................................................................. | 22 | 1 | 2 | 4.00 | 8 | 8 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGTTAT.......................................................................................... | 26 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGTAT...................................................... | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGTTGAG......................................................................................... | 27 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGTT....................................................... | 24 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGTAAT.......................................................................................... | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGTA....................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAT.............................................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGTAGT..................................................... | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGT........................................................ | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGTTTTT.................................................... | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTTTA....................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTT.......................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAC.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGCAGAGAAGGGAG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................AAGCCGGGAGAAGAGACGGGAGT............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TCACTCCTCCCCTCCCGTCTTGA........................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGATT............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .........................................................AAGACGGGAGACGAGAAGGGAGTT............................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................ACTCCTCCCCTCCCGTCTTGTTA...................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................CACTCCTCCCCTCCCGTCTTG......................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TCACTACTCCCCTCCCGTCTTGTT....................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................TACTCCTCCCCTCCCGTCTTGT........................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGTTAATTT....................................................................................... | 29 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGCCGGGAGAAGAGACGGGAG.............................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAAT............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................ACACTCCTCCCCTCCCGTCTTGT........................................................ | 23 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .........................................................AAGACGGGAGAAGAGAAGGGCG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................AAGACGGGAGAAGCGAAGGGAG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAACAGAAGGGAG.............................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................................................CACTCCTCCCCTCCCGTCTTGTTT...................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................CACTCCTCCCCTCCCGTCTTGTTAT..................................................... | 25 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..............................................................................................TCACTCCTACCCTCCCGTCTTGT........................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGACGAGAAGGGAGT............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................TCACTCCTACCCTCCCGTCTTA......................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAA................................................................................................... | 17 | 0 | 2 | 0.50 | 1 | 0 | 0 | 1 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGTAAGT......................................................................................... | 27 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGTT............................................................................................... | 21 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ........................................................AAAGACGGGAGAAGAGAAGGGAGA............................................................................................. | 24 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGATTAT........................................................................................... | 25 | 3 | 20 | 0.15 | 3 | 3 | 0 | 0 |
| .........................................................AAGACGGGAGAAGAGAAGGGAGAA............................................................................................ | 24 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| .........................................................AAGCCGGGAGAGGAGAAGGGAG.............................................................................................. | 22 | 2 | 15 | 0.07 | 1 | 1 | 0 | 0 |
| ........................................................AAAGACGGGAGAAGAGCAGGGAGA............................................................................................. | 24 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 |
| ..........................................................AGACGGGAGAAGAGAAGGGAGAAT........................................................................................... | 24 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 |
|
CCCCGAAGTGTCTATCCTCCCGGGGTTCGGGTCGGAGCCTGGCACCCCCTCTCCCCCTTCTGCCCTCTTCTCTTCCCTCACCAAAAACCCACGGAGTGAGGAGGGGAGGGCAGAACAAGAGAGGACGGGATAGAAGGGAAGGACAGTGTCAAGTCGCTACCCCCAACTCCCAC
*****************************************((((((.((.(((((((((((((((..((....((((((((........)))..)))))))..)))))))))...)))))))).))))))****************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:31 PM