ID:

rno-mir-450b-1

 Coordinate:

chrX:158153254-158153322 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.3 -39.8 -39.8
mature
  1. chrX:158153261-158153282 +
  2. chrX:158589644-158589665 +
star
  1. chrX:158153296-158153317 +
  2. chrX:158589679-158589700 +

Sense Strand Reads

TGGGGGCGTGGTTGAATGCTAGAGGAAGGAGAAAGGCAAAGCCAGATGCTGAACTATTTTTGCGATGTGTTCCTAATATGTACTATGAGTGTATTGGGGACGCTTCGCATTCATGGTTCTGCATCAGTCATATGGAGTGAAGACAGTTACCTCCGAGCTGTAGCCCCAC
******************************************..(((((.(((((((...(((((.(((((((((((((..(((...)))))))))))))))).)))))...))))))).)))))....**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
.........................................................TTTTGCGATGTGTTCCTAATAT.......................................................................................... 22 0 2 591.50 1183 1158 23 2
............................................................................................ATTGGGGACGCTTCGCATTCAT....................................................... 22 0 2 170.00 340 332 1 7
.........................................................TTTTGCGATGTGTTCCTAATA........................................................................................... 21 0 2 64.00 128 124 0 4
.........................................................TTTTGCGATGTGTTCCTAAT............................................................................................ 20 0 3 49.33 148 146 0 2
.........................................................TTTTGCGATGTGTTCCTAATATA......................................................................................... 23 1 2 40.50 81 81 0 0
............................................................................................ATTGGGGACGCTTCGCATTCA........................................................ 21 0 2 23.50 47 43 0 4
............................................................................................ATTGGGGACGCTTCGCATTCATT...................................................... 23 1 2 21.50 43 43 0 0
..........................................................TTTGCGATGTGTTCCTAATAT.......................................................................................... 21 0 2 21.50 43 42 0 1
.........................................................TTTTGCGATGTGTTCCTAATATT......................................................................................... 23 1 2 18.50 37 37 0 0
.............................................................................................TTGGGGACGCTTCGCATTCAT....................................................... 21 0 2 14.50 29 29 0 0
.........................................................TTTTGCGATGTGTTCCTAATAA.......................................................................................... 22 1 2 12.00 24 24 0 0
............................................................................................ATTGGGGACGCTTCGCATTC......................................................... 20 0 2 12.00 24 23 0 1
.........................................................TTTTGCGATGTGTTCCTAA............................................................................................. 19 0 3 8.33 25 24 0 1
............................................................................................ATTGGGGACGCTTCGCATTCATA...................................................... 23 1 2 6.50 13 12 0 1
........................................................ATTTTGCGATGTGTTCCTAATAT.......................................................................................... 23 1 2 6.00 12 12 0 0
.......................................................ATTTTTGCGATGTGTTCCTAAT............................................................................................ 22 0 2 5.00 10 10 0 0
..........................................................TTTGCGATGTGTTCCTAATATT......................................................................................... 22 1 2 4.50 9 8 1 0
..........................................................TTTGCGATGTGTTCCTAATA........................................................................................... 20 0 2 4.50 9 9 0 0
.........................................................TTTTGCGATGTGTTCCTAATATGT........................................................................................ 24 0 2 4.50 9 9 0 0
.........................................................TTTTGCGATGTGTTCCTACTAT.......................................................................................... 22 1 2 4.00 8 8 0 0
........................................................TTTTTGCGATGTGTTCCTAATA........................................................................................... 22 0 2 4.00 8 8 0 0
...........................................................................................AATTGGGGACGCTTCGCATTCAT....................................................... 23 1 2 4.00 8 8 0 0
.............................................................................................TTGGGGACGCTTCGCATTCATT...................................................... 22 1 2 3.50 7 7 0 0
............................................................................................ATTGGGGACGCTTCGCATTCATAA..................................................... 24 2 2 3.50 7 7 0 0
.........................................................TTTTGCGATGTGTTCCTAATATAA........................................................................................ 24 2 2 3.50 7 7 0 0
.........................................................TTTTGCGATGTGTTACTAATAT.......................................................................................... 22 1 2 3.50 7 7 0 0
.........................................................TTTTGCGATGTGTTCCTAATAAA......................................................................................... 23 2 3 3.00 9 9 0 0
............................................................................................ATTGGGGACGCTTCGCATTCATTT..................................................... 24 2 2 3.00 6 6 0 0
.........................................................TTTTGCGATGTGTTCCTAATATG......................................................................................... 23 0 2 3.00 6 6 0 0
............................................................................................ATTGGGGACGCTTCGCATTCAA....................................................... 22 1 2 3.00 6 6 0 0
.........................................................TTTTGCGATGTGTTCCTAAA............................................................................................ 20 1 3 2.67 8 8 0 0
....................................................AATATTTTTGCGATGTGTTCCT............................................................................................... 22 1 2 2.50 5 5 0 0
.........................................................TTTTGCGATGTGTTCCTAATATCG........................................................................................ 24 2 2 2.50 5 0 5 0
........................................................ATTTTGCGATGTGTTCCTAAT............................................................................................ 21 1 3 2.33 7 6 0 1
..........................................................TTTGCGATGTGTTCCTAAT............................................................................................ 19 0 3 2.00 6 6 0 0
........................................................ATTTTGCGATGTGTTCCTAATATT......................................................................................... 24 2 2 2.00 4 4 0 0
........................................................ATTTTGCGATGTGTTCCTAATATA......................................................................................... 24 2 2 2.00 4 4 0 0
.....................................................AAAATTTTGCGATGTGTTCCTAATAT.......................................................................................... 26 3 3 2.00 6 6 0 0
.........................................................TTTTGCGATGTGTTCCTAATATGTACT..................................................................................... 27 0 2 2.00 4 4 0 0
.........................................................TTTTGCGATGTGTTCCTAATAC.......................................................................................... 22 1 2 1.50 3 3 0 0
...........................................................................................TATTGGGGACGCTTCGCATTCA........................................................ 22 0 2 1.50 3 3 0 0
............................................................................................ATTGGGGACGATTCGCATTCAT....................................................... 22 1 2 1.50 3 3 0 0
.......................................................AATTTTGCGATGTGTTCCTAATAT.......................................................................................... 24 1 2 1.50 3 3 0 0
.........................................................TTTTGCGATGTGTCCCTAATAT.......................................................................................... 22 1 2 1.50 3 3 0 0
.........................................................TTTTGCGATGAGTTCCTAATAT.......................................................................................... 22 1 2 1.50 3 3 0 0
........................................................ATTTTGCGATGTGTTCCTAATATGTAC...................................................................................... 27 1 2 1.50 3 3 0 0
.....................................................AAATTTTTGCGATGTGTTCCTAATGT.......................................................................................... 26 3 3 1.33 4 4 0 0
........................................................................................GTGGATTGGGGACGCTTCGCATTCAT....................................................... 26 1 2 1.00 2 0 0 2
............................................................................................ATTGGGGACGCTTCGCAT........................................................... 18 0 2 1.00 2 2 0 0
.........................................................TTTTGCGATGCGTTCCTAATAT.......................................................................................... 22 1 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATT........................................................................................... 21 1 3 1.00 3 3 0 0
.........................................................TTTTGCGATGTCTTCCTAATAT.......................................................................................... 22 1 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGCTTCGCATTCAAG...................................................... 23 1 2 1.00 2 2 0 0
.............................................................................................TTGGGGACGCTTCGCATTCATTA..................................................... 23 2 2 1.00 2 2 0 0
............................................................................................ATTGGGGACTCTTCGCATTCAT....................................................... 22 1 2 1.00 2 2 0 0
.........................................................TTTTGCGTTGTGTTCCTAATAT.......................................................................................... 22 1 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGCTTCGCATTCATAT..................................................... 24 2 2 1.00 2 2 0 0
.........................................................TTTTGCGACGTGTTCCTAATAT.......................................................................................... 22 1 2 1.00 2 2 0 0
.........................................................TTTTGCGATATGTTCCTAATAT.......................................................................................... 22 1 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTACTA........................................................................................... 21 1 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGCTTCGCATTCAAT...................................................... 23 2 2 1.00 2 2 0 0
........................................................ATTTTGCGATGTGTTCCTAATA........................................................................................... 22 1 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATATGA........................................................................................ 24 1 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATATAT........................................................................................ 24 1 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGGTTCGCATTCAT....................................................... 22 1 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGCTTCGCATA.......................................................... 19 1 2 1.00 2 2 0 0
.............................................................................................TTGGGGACGCTTCGCATTCA........................................................ 20 0 2 1.00 2 2 0 0
.............................................................................................TTGGGGACGCTTCGCATTCATAT..................................................... 23 2 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATATGTAC...................................................................................... 26 0 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATATTA........................................................................................ 24 2 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGCTTCGCATTCATGA..................................................... 24 1 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATATGTA....................................................................................... 25 0 2 1.00 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTA.............................................................................................. 18 0 3 1.00 3 2 0 1
............................................................................................ATTGGGGACGCCTCGCATTCAT....................................................... 22 1 2 1.00 2 2 0 0
............................................................................................ATTGGGGACGCTTCGCATTCAC....................................................... 22 1 2 1.00 2 2 0 0
........................................................ATTTTGCGATGTGTTCCTAATGTGCAC...................................................................................... 27 3 3 0.67 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTACT............................................................................................ 20 1 3 0.67 2 2 0 0
.........................................................TTTTGCGATGTGTTACTAAT............................................................................................ 20 1 3 0.67 2 2 0 0
.......................................................AATTTTGCGATGTGTTCCTAATGT.......................................................................................... 24 2 3 0.67 2 2 0 0
........................................................GTTTTGCGATGTGTTCCTAAT............................................................................................ 21 1 3 0.67 2 2 0 0
.........................................................TTTTGCGATGTGTTCCTAATGTGTA....................................................................................... 25 1 3 0.67 2 2 0 0
........................................................TTTTTGCGATGTGTTCCTAAT............................................................................................ 21 0 3 0.67 2 2 0 0
.........................................................TTTTGTGATGTGTTCCTAATATGT........................................................................................ 24 1 2 0.50 1 1 0 0
.........................................................TTGTGCGATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATATGTAC...................................................................................... 25 0 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAATATAGT....................................................................................... 25 3 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGCTCCTAATATT......................................................................................... 23 2 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTGCTAATATT......................................................................................... 23 2 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCCAATA........................................................................................... 21 1 2 0.50 1 1 0 0
...........................................................................................TATTGGGGACGCTTCGCATTCAT....................................................... 23 0 2 0.50 1 1 0 0
.............................................................................................TTGGGGACGCTTCGCATTCGT....................................................... 21 1 2 0.50 1 1 0 0
...................................................TAATATTTTTGCGATGTGTTCC................................................................................................ 22 2 2 0.50 1 1 0 0
...........................................................TTGCGATGTGTTCCTAATATG......................................................................................... 21 0 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTCCCTAATATGTCC...................................................................................... 26 2 2 0.50 1 1 0 0
.........................................................TATTGCGATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTCCCTACTAT.......................................................................................... 22 2 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATTCAG....................................................... 22 1 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATAAA......................................................................................... 22 2 4 0.50 2 2 0 0
............................................................................................ATTGTGGACGCTTCGCATTCATT...................................................... 23 2 2 0.50 1 1 0 0
.........................................................TTTTTCGATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTAGCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGCTGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAATATGTACTA.................................................................................... 28 0 2 0.50 1 1 0 0
...........................................................................................TATTGGGGACGCTTCGCATT.......................................................... 20 0 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTACCTAATA........................................................................................... 21 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTACTATA......................................................................................... 23 2 2 0.50 1 1 0 0
............................................................................................ATTGGAGACGCTTCGCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATTCATTAA.................................................... 25 3 2 0.50 1 1 0 0
.........................................................TTTTACGATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATTCT........................................................ 21 1 2 0.50 1 1 0 0
..............................................................................................TGGGGACGCTTCGCATTCAT....................................................... 20 0 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATATA......................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAACAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGCAGCTTCGCATTCAT....................................................... 22 2 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAATAAG......................................................................................... 23 1 2 0.50 1 1 0 0
......................................................TATTTTTGCGATGTGTTCCTAA............................................................................................. 22 0 2 0.50 1 1 0 0
........................................................TTTTTGCGATGTGTTCCTAATAT.......................................................................................... 23 0 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGATCCTAATAT.......................................................................................... 21 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCCAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGTTTCGCATTCATT...................................................... 23 2 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATTCATGTGA................................................... 26 3 2 0.50 1 1 0 0
...........................................................................................AATTGGGGACGCTTCGCATTCATT...................................................... 24 2 2 0.50 1 1 0 0
.........................................................TTTTGCGAAGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTGGCATTCA........................................................ 21 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATCCAT....................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCATCGCATTCATA...................................................... 23 2 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATATAT........................................................................................ 23 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCCTTCC........................................................ 21 2 2 0.50 1 1 0 0
.............................................................................................TTGGGGACGCTTCGCATTCATTT..................................................... 23 2 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTACTAC.......................................................................................... 22 2 2 0.50 1 1 0 0
.........................................................ATTTGCGATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................ATTTGCGATGTGTTCCTAATATGT........................................................................................ 24 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGTTTCGCATT.......................................................... 19 1 2 0.50 1 0 0 1
............................................................................................ATTGGGGACGCTTCGCATTCATTA..................................................... 24 2 2 0.50 1 1 0 0
............................................................................................ATTGGGGCCGCTTCGCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATCGGGGACGCTTCGCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGAAGTGTTCCTAATA........................................................................................... 21 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTACCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGATCCTAATA........................................................................................... 21 1 2 0.50 1 1 0 0
.............................................................................................TTGGGGACGCTTCGCATT.......................................................... 18 0 2 0.50 1 1 0 0
......................................................AATTTTTGCGATGTGTTCCT............................................................................................... 20 1 2 0.50 1 1 0 0
.........................................................TTTAGCGATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTGGCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
.............................................................................................TTGCGGACGCTTCGCATTCATTT..................................................... 23 3 2 0.50 1 1 0 0
............................................................................................CTTGGGGACGCTTCGCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
..........................................................................................ATATTGGGGACGCTTCGCATTC......................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGATTCGCATTCA........................................................ 21 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAATATTT........................................................................................ 24 1 2 0.50 1 1 0 0
........................................................ATTTTGCGATGTGTTCCTAATAC.......................................................................................... 23 2 2 0.50 1 1 0 0
.........................................................TTTTGCGAGGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTCTTCCTAATATA......................................................................................... 23 2 2 0.50 1 1 0 0
...........................................................................................TATTGGGGACGCTTCGCATTCAA....................................................... 23 1 2 0.50 1 1 0 0
.......................................................ATTTTTGCGATGTGTTCCTACT............................................................................................ 22 1 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATTTCCA....................................................................................... 24 3 2 0.50 1 1 0 0
.........................................................GTTTGCGATGTGTTCCTAATATC......................................................................................... 23 2 2 0.50 1 1 0 0
.........................................................TTTTGCTATGTGTTCCTAATA........................................................................................... 21 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATT.......................................................... 19 0 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCACATTCAT....................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTATTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGATGCTTCGCATTC......................................................... 20 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCCTTCA........................................................ 21 1 2 0.50 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATATG......................................................................................... 22 0 2 0.50 1 1 0 0
.........................................................CTTTGCGCTGTGTTCCTAATAT.......................................................................................... 22 2 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTGCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
.......................................................ATTTTTGCGATGTGTTCCTA.............................................................................................. 20 0 2 0.50 1 1 0 0
.........................................................TTTTGCCATGTGTTCCTAATAT.......................................................................................... 22 1 2 0.50 1 1 0 0
...........................................................................................TATTGGGGACGCTTCGCATTCAGT...................................................... 24 2 2 0.50 1 1 0 0
......................................................AAATTTTGCGATGTGTTCCTAATATA......................................................................................... 26 3 2 0.50 1 1 0 0
...........................................................................................TATTGGGGACGCTTCGCATCCAT....................................................... 23 1 2 0.50 1 1 0 0
.............................................................................................TTGCGGACGCTTCGCATTCAT....................................................... 21 1 2 0.50 1 1 0 0
............................................................................................ATTGGGGACGCTTCCCATTCAT....................................................... 22 1 2 0.50 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAAAT........................................................................................... 21 2 8 0.38 3 3 0 0
.........................................................TTTTGCGATGTGTTCCTAATTT.......................................................................................... 22 1 3 0.33 1 1 0 0
..........................................................TTTGCGATGTGTTCCTAATT........................................................................................... 20 1 3 0.33 1 1 0 0
........................................................ATTTTGCGATGTGTTCCTAATT........................................................................................... 22 2 3 0.33 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAT............................................................................................. 19 1 3 0.33 1 1 0 0
.........................................................TTTTGCCATGTGTTCCTAAT............................................................................................ 20 1 3 0.33 1 1 0 0
.........................................................TTTTGCGATGGGTTCCTAATAC.......................................................................................... 22 2 3 0.33 1 1 0 0
............................................................................................ATTGGGGACGGTTCGCATTCAG....................................................... 22 2 3 0.33 1 1 0 0
.........................................................TTTTGCAATGTGTTCCTAATA........................................................................................... 21 1 3 0.33 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAATTTGT........................................................................................ 24 1 3 0.33 1 1 0 0
.........................................................TTTTGCGATGTGTTCGTAATAT.......................................................................................... 22 1 3 0.33 1 1 0 0
.........................................................TTTTCCGATGTGTTCCTAATATAA........................................................................................ 24 3 3 0.33 1 1 0 0
.........................................................TTTTGCGAAGTGTTCCTAATAA.......................................................................................... 22 2 3 0.33 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAATCT.......................................................................................... 22 1 3 0.33 1 1 0 0
.........................................................TTTTGCAATGTGTTCCTAATAT.......................................................................................... 22 1 3 0.33 1 1 0 0
............................................................................................ATTGGGGACGCTTCGCATTT......................................................... 20 1 3 0.33 1 1 0 0
............................................................................................ATTGGGGACGGTTCGCATTCAA....................................................... 22 2 3 0.33 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAC............................................................................................. 19 1 4 0.25 1 1 0 0
..........................................................TTTGCGATGGGTTCCTAATATT......................................................................................... 22 2 4 0.25 1 1 0 0
...........................................................TTGCGATGAGTTCCTAATAT.......................................................................................... 20 1 4 0.25 1 1 0 0
.........................................................GTTTGCGATGTGTTCCTAATAA.......................................................................................... 22 2 4 0.25 1 1 0 0
......................................................AAATTTTGCGATGTGTTCCTAATGT.......................................................................................... 25 3 4 0.25 1 1 0 0
.........................................................TTTTGCAATGTGTTCCTAAT............................................................................................ 20 1 4 0.25 1 1 0 0
........................................................ATTTTGCGATGAGTTCCTAATAT.......................................................................................... 23 2 4 0.25 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAAG............................................................................................ 20 1 4 0.25 1 1 0 0
............................................................................................ATTGGGGAAGATTCGCATTCATT...................................................... 23 3 5 0.20 1 1 0 0
.........................................................TTTTGTGATGTGTTCCTAAT............................................................................................ 20 1 5 0.20 1 1 0 0
................................................................ATGTGTTCCTAATAT.......................................................................................... 15 0 20 0.20 4 4 0 0
............................................................................................ATTGGGGACGTTTCGCATTCATAT..................................................... 24 3 5 0.20 1 1 0 0
.........................................................TTTTCCGATGTGTTCCTAATATT......................................................................................... 23 2 7 0.14 1 1 0 0
..................................................CTAATATTTTTGCGATGTGTTC................................................................................................. 22 3 20 0.10 2 2 0 0
............................................................................................ATTGGGGACGCTTAGCATA.......................................................... 19 2 11 0.09 1 1 0 0
.........................................................TTTTGCGATGTGTTCCTAAAAAA......................................................................................... 23 3 15 0.07 1 1 0 0

Anti-sense strand reads

ACCCCCGCACCAACTTACGATCTCCTTCCTCTTTCCGTTTCGGTCTACGACTTGATAAAAACGCTACACAAGGATTATACATGATACTCACATAACCCCTGCGAAGCGTAAGTACCAAGACGTAGTCAGTATACCTCACTTCTGTCAATGGAGGCTCGACATCGGGGTG
****************************************..(((((.(((((((...(((((.(((((((((((((..(((...)))))))))))))))).)))))...))))))).)))))....****************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:53 PM