ID:rno-mir-433 |
Coordinate:chr6:133712334-133712426 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -41.0 | -40.4 | -40.4 |
 |
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 |
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GCATCTCCATGACGCTGAAATTGAAATGTGAGAAGAAGAAGACCCAATGCCCGGGGAGAAGTACGGTGAGCCTGTCATTATTCAGAGAGGCTAGATCCTCTGTGTTGAGAAGGATCATGATGGGCTCCTCGGTGTTCTCCAGGTAGCGGAACCACACCATGAAGGCAGCCCGGATTGGAAGGATCCTCATCTC
**********************************************.((((...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).)))).....******************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAT........................................................ | 24 | 2 | 1 | 189.00 | 189 | 188 | 0 | 1 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAA........................................................ | 24 | 2 | 1 | 138.00 | 138 | 138 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGT.......................................................... | 22 | 0 | 1 | 120.00 | 120 | 111 | 9 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTT........................................................ | 24 | 1 | 1 | 63.00 | 63 | 63 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTA......................................................... | 23 | 1 | 1 | 37.00 | 37 | 37 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAAT....................................................... | 25 | 2 | 1 | 28.00 | 28 | 28 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTT......................................................... | 23 | 0 | 1 | 23.00 | 23 | 23 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTA........................................................ | 24 | 1 | 1 | 22.00 | 22 | 22 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTAT....................................................... | 25 | 1 | 1 | 18.00 | 18 | 18 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTTT....................................................... | 25 | 1 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTATT....................................................... | 25 | 2 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAG........................................................ | 24 | 2 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAAA....................................................... | 25 | 3 | 2 | 8.00 | 16 | 16 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTGT........................................................ | 24 | 2 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAGT....................................................... | 25 | 2 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTATTT...................................................... | 26 | 3 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTAA.......................................................... | 22 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTGA........................................................ | 24 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTATTC.............................................................................................................. | 22 | 0 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTATT............................................................................................................... | 21 | 0 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTTA....................................................... | 25 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTG........................................................... | 21 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAC........................................................ | 24 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTAA....................................................... | 25 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTGTAT........................................................ | 23 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAGA....................................................... | 25 | 3 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAAG....................................................... | 25 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGAT......................................................... | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGCAT........................................................ | 24 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTATA....................................................... | 25 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGAA......................................................... | 23 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTA........................................................... | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGATA........................................................ | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTTAT...................................................... | 26 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTGTAA........................................................ | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTGTATTT...................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTTTAT........................................................ | 24 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGAAT........................................................ | 24 | 3 | 3 | 2.33 | 7 | 7 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGGAT........................................................ | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTGTA......................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTGT.......................................................... | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTCT........................................................ | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGATCCTCGGTGT.......................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTA................................................................................................................. | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTGAA....................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTATTAT............................................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGATTT....................................................... | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................................GATCATGATGGGCTCCTCGGTGT.......................................................... | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCCTGATGGGCTCCTCGGTGTTT........................................................ | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTATTCC............................................................................................................. | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTTCTCGGTGTAA........................................................ | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGA............................................................ | 20 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGCCTCCTCGGTGTAA........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGAGCTCCTCGGTGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGAAAT....................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGTTGGGCTCCTCGGTGTA......................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCAAGATGGGCTCCTCGGTGTAAT....................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTGTTT...................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGG............................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGCTGGGCTCCTCGGTGTTAT....................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCCTGATGGGCTCCTCGGTGTT......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................AACATGATGGGCTCCTCGGTGTAAT....................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATCGGCTCCTCGGTGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTGAT....................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGATGTAT........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCCCGGTGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGCAA........................................................ | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTAATATC...................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTG........................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTAG....................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTTTT...................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTACTCGGTGTTTT....................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCATCGGTGTAA........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGTGCTCCTCGGTGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGAAA........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTATTCT............................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGCGCTCCTCGGTGTAT........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTAGGTATT......................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTGT....................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTATAA..................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATAATGATGGGCTCCTCGGTGTAC........................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCACGATGGGCTCCTCGGTGTAA........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGGGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ACCATGATGGGCTCCTCGGTGTAT........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGATT........................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATCATGGGCTCCTCGGTGTTAA....................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................AATCATGATGGGCTCCTCGGTGTAG........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTTTC...................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTAATT...................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGA.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCCTGATGGGCTCCTCGGTGTA......................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGCGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGCCTCCTCGGTGTAT........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGC.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTAAA...................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTAAT...................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATACTGATGGGCTCCTCGGTGTTT........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................TACGGTGAGCCTGTCATTATTCA............................................................................................................. | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGTTTAC...................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGAGT.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGGGTAT........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................GATCATGATGGGCTCCTCGGTGTA......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................................CATGATGGGCTCCTCGGTGTAAT....................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGTGCTCCTCGGTGTGA........................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGCTGGGCTCCTCGGTGTTTA....................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTGG.......................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................................ATCCTGATGGGCTCCTCGGTGTAT........................................................ | 24 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| .................................................................................................................ATCCTGATGGGCTCCTCGGTGTAA........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTACTCGGTGTAT........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTTCTCGGTGTAT........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGGTAAA......................................................... | 23 | 3 | 4 | 0.50 | 2 | 2 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTGTAAA....................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGATCCTCGGTGTAA........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCGTTGTAA........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..................................................................................................................TCATGATGGGCTCCTCGGTATAA........................................................ | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATAATGATGGGCTCCTCGGTGTAT........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCTTCGGTGTAA........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTAGGTATTTT....................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGATCATCGGTGTC......................................................... | 23 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTTCTCGGTGTAG........................................................ | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ...................................................................................................................CATGATGGGCTCCACGGTGTAT........................................................ | 22 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATACTGATGGGCTACTCGGTGT.......................................................... | 22 | 3 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| .................................................................................................................ATCATGATGGGCTCCTCTGTGTAA........................................................ | 24 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 |
|
CGTAGAGGTACTGCGACTTTAACTTTACACTCTTCTTCTTCTGGGTTACGGGCCCCTCTTCATGCCACTCGGACAGTAATAAGTCTCTCCGATCTAGGAGACACAACTCTTCCTAGTACTACCCGAGGAGCCACAAGAGGTCCATCGCCTTGGTGTGGTACTTCCGTCGGGCCTAACCTTCCTAGGAGTAGAG
*******************************************.((((...((((((...(((.(((((((((((.(((((.(((((......))))).))........))).))))))))))).)))...)))))).)))).....********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:46 PM