ID:rno-mir-431 |
Coordinate:chr6:133711425-133711538 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
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| -43.0 | -43.0 | -42.9 |
 |
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GGAAGGTGACCGCCTCTTGGTCGCCAAGCGGGTCCTCTTGCACGTCGTTGTCCTGCGCGTCCTGCGAGGTGTCTTGCAGGCCGTCATGCAGGCCACACTGACGGTAACGTTGCAGGTCGTCTTGCAGGGCTTCTCGCAAGACGACATCTTCATCGCCAACGACGTGCAGCTCCAAGTATCGGTGCTGGTATGGGTCAGGGAAGATGTCCTCCTC
******************************************************...((((.(((((((.((((((((((.((...((((((((........)))....)))))...)).)))))))))).))))))).)))).....****************************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| .....................................................................TGTCTTGCAGGCCGTCATGC............................................................................................................................. | 20 | 0 | 1 | 40.00 | 40 | 38 | 0 | 2 |
| .....................................................................TGTCTTGCAGGCCGTCATGCA............................................................................................................................ | 21 | 0 | 1 | 20.00 | 20 | 20 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAT........................................................................................................................... | 22 | 1 | 2 | 12.00 | 24 | 24 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCAT............................................................................... | 25 | 2 | 1 | 8.00 | 8 | 1 | 7 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAA........................................................................................................................... | 22 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGT......................................................................................................................... | 24 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAAT.......................................................................................................................... | 23 | 2 | 2 | 5.00 | 10 | 10 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGA............................................................................................................................. | 20 | 1 | 1 | 4.00 | 4 | 3 | 0 | 1 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTC................................................................................. | 23 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCT................................................................................ | 24 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAG........................................................................................................................... | 22 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTTT................................................................................ | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCT............................................................................................................................ | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTC................................................................................. | 24 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGT............................................................................................................................. | 20 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ......................................................................GTCTTGCAGGCCGTCATGCA............................................................................................................................ | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTATAA.............................................................................. | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................................CAGGTCGTCTTGCAGGGCTTCTAT.............................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAAA.......................................................................................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTAA................................................................................ | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGG.......................................................................................................................... | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCTTT.............................................................................. | 26 | 2 | 1 | 2.00 | 2 | 0 | 2 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAAGA......................................................................................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCTA............................................................................... | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCA................................................................................ | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTCT................................................................................ | 25 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTT................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTTT................................................................................ | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ......................................................................GTCTTGCAGGCCGTCATGCAGT.......................................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCAA............................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGAAGGTCGTCTTGCAGGGCTTCT................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................GCAGGTCGTCTTGCAGGGCTTTAA............................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTATAT.............................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGTAAA....................................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTTTAT.............................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGC......................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ......................................................................GTCTTGCAGGCCGTCATGCAT........................................................................................................................... | 21 | 1 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTCCAT............................................................................... | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ................................................................................................................CAGGTCGTCTTGCAGGGCTTCA................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTCTAT.............................................................................. | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGTA......................................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTA................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGGCTTGCAGGGCTTCT................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGAAT....................................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCG............................................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTATT................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCTAA.......................................................................................................................... | 23 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGA.......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGATT....................................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGTT........................................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTT................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTAT................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTGA................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGTTT....................................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................CGTCTTGCAGGCCGTCATGC............................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................CAGGTCGTCTTGCAGGGCTTCTTT.............................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGATCGTCTTGCAGGGCTTCAA............................................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCACA.......................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................CAGGTCGTCTTGCAGGGCTTCAT............................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCAAGA............................................................................. | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGGAA........................................................................................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTT.................................................................................. | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCCGGTCGTCTTGCAGGGCTTC................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCATGCCGTCATGC............................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTCA................................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAATT......................................................................................................................... | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAACT......................................................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTTAT............................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCTAGA......................................................................................................................... | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ................................................................................................................CAGGTCGTCTTGCAGGGCTTCTA............................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTAA................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCCGGCCGTCATGC............................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTCAAT.............................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AGCAGGTCGTCTTGCAGGGCTTCTTT.............................................................................. | 26 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATG.............................................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCAGT................................................................................. | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAAAA......................................................................................................................... | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTTTT............................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TGCAGGTCGTCTTGCAGGGCTTTTTT.............................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ......................................................................GTCTTGCAGGCCGTCATGCAAA.......................................................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGTTA........................................................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTGCAGGTCGTCTTGCAGGGCTTCGT............................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAAAT......................................................................................................................... | 24 | 3 | 4 | 0.75 | 3 | 2 | 1 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCAGTTT........................................................................................................................ | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCTA........................................................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ................................................................................................................CAGGTCGTCTTGCAGGGCTTCAAT.............................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATGCATTC......................................................................................................................... | 24 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| .....................................................................TGTCTTGAAGGCCGTCATGC............................................................................................................................. | 20 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 |
| .....................................................................TGTCTTGCAGGCCGTCATGCATAA......................................................................................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .....................................................................TGTCTTGCAGGCCGTCATAA............................................................................................................................. | 20 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| ...........................GCGGGTCGTCGTGCACG.......................................................................................................................................................................... | 17 | 2 | 16 | 0.06 | 1 | 0 | 1 | 0 |
|
CCTTCCACTGGCGGAGAACCAGCGGTTCGCCCAGGAGAACGTGCAGCAACAGGACGCGCAGGACGCTCCACAGAACGTCCGGCAGTACGTCCGGTGTGACTGCCATTGCAACGTCCAGCAGAACGTCCCGAAGAGCGTTCTGCTGTAGAAGTAGCGGTTGCTGCACGTCGAGGTTCATAGCCACGACCATACCCAGTCCCTTCTACAGGAGGAG
******************************************************************...((((.(((((((.((((((((((.((...((((((((........)))....)))))...)).)))))))))).))))))).)))).....****************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:46 PM