ID:

rno-mir-412

 Coordinate:

chr6:133893571-133893640 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-36.8 -36.8 -36.8

Sense Strand Reads

AGGCCCAGCACCTCAGGGAAGAACGTGGACTCATCTTCGCTCTGGGGTATGGGACGGATGGTCGACCAGCTGGAAAGTAATTGTTTCTAATGTACTTCACCTGGTCCACTAGCCGTCGGTGCCCGCCGCAGCCTGCGCCAGGATGTCACTACCTCAGCTCGGCACCTCTG
***********************************...(((...((((((..(((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).))))).)))))).....)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
..........................................................TGGTCGACCAGCTGGAAAGTAAT......................................................................................... 23 0 1 19.00 19 19
..............................................................................................CTTCACCTGGTCCACTAGCCGTTT.................................................... 24 2 1 3.00 3 3
.........................................................ATGGTCGACCAGCTGGAAAGTAATTGT...................................................................................... 27 0 1 3.00 3 3
...............................................................................................TTCACCTGGTCCACTAGCCGTCTTT.................................................. 25 2 1 1.00 1 1
..........................................................TGGTCGACCAGCTGGAAAGTAA.......................................................................................... 22 0 1 1.00 1 1
...........................................................GGTCGACCAGCTGGAAAGTAATTG....................................................................................... 24 0 1 1.00 1 1
..........................................................TGGTCGACCAGCTGGAAAGT............................................................................................ 20 0 1 1.00 1 1
..........................................................TGGTCGACCAGCTGGAAAGTAATTGTT..................................................................................... 27 0 1 1.00 1 1
..........................................................TGGTCGACCAGCTGGAAAGTATA......................................................................................... 23 2 1 1.00 1 1
..........................................................TGGTCGACCAGCTGGAAAGTAT.......................................................................................... 22 1 1 1.00 1 1
..........................................................TGGTCGACCAGCTGGAAAGGAAT......................................................................................... 23 1 1 1.00 1 1
..............................................................................................CTTCACCTGGTCCACTAGCCTTAT.................................................... 24 3 2 0.50 1 1
....................................................................................................CTGGTCCACTAGCCGTTT.................................................... 18 2 20 0.05 1 1

Anti-sense strand reads

TCCGGGTCGTGGAGTCCCTTCTTGCACCTGAGTAGAAGCGAGACCCCATACCCTGCCTACCAGCTGGTCGACCTTTCATTAACAAAGATTACATGAAGTGGACCAGGTGATCGGCAGCCACGGGCGGCGTCGGACGCGGTCCTACAGTGATGGAGTCGAGCCGTGGAGAC
***********************************...(((...((((((..(((((.((((.((((((.(((..((((((((....)))).))))))).)))))).)))).))))).)))))).....)))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:48 PM