ID:

rno-mir-409a

Coordinate:

chr6:133893419-133893495 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-37.5 -37.4

Sense Strand Reads

GGAAACGCAGCCATCCATCGGCCTTGTTCTGAGCGTCCAAGCCTCTCCATGGTACTCGGAGAGAGGTTACCCGAGCAACTTTGCATCTGGAGGACGAATGTTGCTCGGTGAACCCCTTTTCGGTATCAAATCCCTCCAGGGAGGCCAATTGGAGGCCCAGCACCTCAGGGAAGAACG
************************************************.((((((.(((((((.((((..(((((((((((((..(((...))))))).)))))))))..)))).)))))))))))))......*******************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
...............................................................AGGTTACCCGAGCAACTTTGCAT........................................................................................... 23 0 1 916.00 916 911 5 0
...............................................................AGGTTACCCGAGCAACTTTGCATC.......................................................................................... 24 0 1 317.00 317 316 1 0
...............................................................AGGTTACCCGAGCAACTTTGCATCT......................................................................................... 25 0 1 176.00 176 176 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAT.......................................................... 24 1 1 159.00 159 158 0 1
...............................................................................................GAATGTTGCTCGGTGAACCCCTTT.......................................................... 24 0 1 85.00 85 85 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAA.......................................................... 24 2 1 60.00 60 60 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTA........................................................... 23 1 1 51.00 51 51 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTT........................................................... 23 0 1 51.00 51 51 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCT............................................................ 23 0 1 39.00 39 39 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCT............................................................ 22 0 1 34.00 34 34 0 0
...............................................................AGGTTACCCGAGCAACTTTGCA............................................................................................ 22 0 1 34.00 34 33 1 0
...............................................................AGGTTACCCGAGCAACTTTGCATCA......................................................................................... 25 1 1 32.00 32 32 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATT.......................................................................................... 24 1 1 30.00 30 30 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAAT......................................................... 25 2 1 23.00 23 23 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTA.......................................................... 24 1 1 23.00 23 23 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAAA......................................................... 25 3 1 21.00 21 21 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTT......................................................... 25 0 1 20.00 20 20 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATT......................................................... 25 1 1 18.00 18 18 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTAT......................................................... 25 1 1 18.00 18 18 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTT........................................................... 24 0 1 15.00 15 15 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTAT.......................................................... 25 1 1 15.00 15 15 0 0
...............................................................AGGTTACCCGAGCAACTTTGCCT........................................................................................... 23 1 1 14.00 14 14 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTAT........................................................ 26 2 1 13.00 13 13 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCTT........................................................................................ 26 1 1 12.00 12 11 0 1
................................................................GGTTACCCGAGCAACTTTGCAT........................................................................................... 22 0 1 12.00 12 12 0 0
...............................................................AGGTTACCCGAGCAACTTTGCAA........................................................................................... 23 1 1 12.00 12 12 0 0
...............................................................AGGTTACCCGAGCCACTTTGCAT........................................................................................... 23 1 1 11.00 11 11 0 0
...............................................................AGGTTACCCGAGCACCTTTGCAT........................................................................................... 23 1 1 11.00 11 11 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTAA........................................................ 26 2 1 11.00 11 11 0 0
.................................................................................................ATGTTGCTCGGTGAACCCCTAT.......................................................... 22 1 1 10.00 10 10 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTT.......................................................... 25 0 1 10.00 10 10 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTA........................................................... 24 1 1 10.00 10 10 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCAA........................................................... 23 2 1 10.00 10 10 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTAT.......................................................... 23 1 1 9.00 9 9 0 0
...............................................................AGGTTACCCGAGCAACTTTGCGT........................................................................................... 23 1 1 8.00 8 8 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTAA......................................................... 25 2 1 8.00 8 8 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTTT........................................................ 26 1 1 8.00 8 8 0 0
................................................................GGTTACCCGAGCAACTTTGCATC.......................................................................................... 23 0 1 8.00 8 8 0 0
..............................................................AAGGTTACCCGAGCAACTTTGCAT........................................................................................... 24 1 1 7.00 7 5 2 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTAAA........................................................ 26 3 1 7.00 7 7 0 0
...............................................................AGGTTACCCGAGCAACTTTGCCTC.......................................................................................... 24 1 1 7.00 7 7 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTAA.......................................................... 25 2 1 7.00 7 7 0 0
...............................................................AGGTTACCCGAGCAACTTTGCTT........................................................................................... 23 1 1 7.00 7 7 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTT......................................................... 24 0 1 6.00 6 6 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTAAA......................................................... 26 3 1 6.00 6 6 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATA.......................................................................................... 24 1 1 6.00 6 6 0 0
...............................................................AGGTTACCCGAGCAACTTTGCCTCT......................................................................................... 25 1 1 6.00 6 6 0 0
...............................................................AGGTTACCCGAGCAACTTTGC............................................................................................. 21 0 1 6.00 6 6 0 0
...............................................................AGGTTACCCGAGCCACTTTGCATCT......................................................................................... 25 1 1 5.00 5 5 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCTAT....................................................................................... 27 2 1 5.00 5 5 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTAAT........................................................ 26 3 1 5.00 5 5 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTT.......................................................... 23 0 1 5.00 5 5 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTAAT......................................................... 26 2 1 5.00 5 5 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTTA......................................................... 26 1 1 5.00 5 5 0 0
...............................................................AGGTTACCCGAGCACCTTTGCATCT......................................................................................... 25 1 1 5.00 5 5 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATA......................................................... 25 2 1 5.00 5 5 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTT........................................................... 22 0 1 5.00 5 5 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTAT........................................................ 25 2 1 4.00 4 4 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAG.......................................................... 24 2 1 4.00 4 4 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTAT......................................................... 24 1 1 4.00 4 4 0 0
...............................................................AGGTTACCCGGGCAACTTTGCAT........................................................................................... 23 1 1 4.00 4 4 0 0
................................................................GGTTACCCGAGCAACTTTGCATCTTT....................................................................................... 26 2 1 4.00 4 4 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCAAAT......................................................... 25 3 1 4.00 4 4 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCTA........................................................................................ 26 1 1 4.00 4 4 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTATT......................................................... 26 1 1 4.00 4 4 0 0
..........................................................CAAAAAGGTTACCCGAGCAACTTTGCAT........................................................................................... 28 3 1 4.00 4 4 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCATT.......................................................... 24 1 1 4.00 4 4 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTATT......................................................... 24 1 1 4.00 4 4 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCAAT.......................................................... 24 2 1 4.00 4 4 0 0
...............................................................AGGTTACCCGAGCAACTTTGCTTC.......................................................................................... 24 1 1 4.00 4 4 0 0
...............................................................AGGTTACCCGAGCCACTTTGCATC.......................................................................................... 24 1 1 4.00 4 4 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTAA......................................................... 26 2 1 4.00 4 4 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAGA......................................................... 25 3 1 3.00 3 3 0 0
...............................................................AGGTTCCCCGAGCAACTTTGCAT........................................................................................... 23 1 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCAAA.......................................................... 24 3 1 3.00 3 3 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTAGT....................................................... 26 3 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTA......................................................... 25 1 1 3.00 3 3 0 0
...............................................................AGGTTACCCGAGCACCTTTGCATC.......................................................................................... 24 1 1 3.00 3 3 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTTT......................................................... 26 0 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGCGAACCCCTAT.......................................................... 24 2 1 3.00 3 3 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTA........................................................... 22 1 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATTA........................................................ 26 2 1 3.00 3 3 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTA.......................................................... 25 1 1 3.00 3 3 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTATTAT....................................................... 26 3 1 3.00 3 3 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATTGGC....................................................................................... 27 3 1 3.00 3 3 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTAAT....................................................... 26 3 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAGT......................................................... 25 2 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCAT........................................................... 23 1 1 3.00 3 3 0 0
..............................................................AAGGTTACCCGAGCAACTTTGCATCT......................................................................................... 26 1 1 3.00 3 3 0 0
...............................................................CGGTTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATGA........................................................ 26 3 1 3.00 3 3 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCATA.......................................................... 24 2 1 2.00 2 2 0 0
.................................................................GTTACCCGAGCAACTTTGCATCAG........................................................................................ 24 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACTTTACATCT......................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCTACTTTGCATCT......................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAACAACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATTA......................................................................................... 25 2 1 2.00 2 2 0 0
..............................................................................................AGAATGTTGCTCGGTGAACCCCTTA.......................................................... 25 2 1 2.00 2 2 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTATCA........................................................ 27 3 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTAGT........................................................ 25 3 1 2.00 2 2 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCATT........................................................... 24 1 1 2.00 2 2 0 0
.............................................................................................ACGAATGTTGCTCGGTGAACCCCTTTTAT....................................................... 29 2 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATAT........................................................ 26 3 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTTT........................................................ 25 1 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATTT........................................................ 26 2 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCAAAA...................................................................................... 28 3 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTGT.......................................................... 24 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACCTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGCGCAACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
..............................................................................................AGAATGTTGCTCGGTGAACCCCTAT.......................................................... 25 2 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACTTTG.............................................................................................. 20 0 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTATTT........................................................ 25 2 1 2.00 2 2 0 0
...............................................................AGGTTACCCAAGCAACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AGGCTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AGTTTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTAAG........................................................ 26 3 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTATT........................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................AGAATGTTGCTCGGTGAACCCCT............................................................ 23 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACTTTGTAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AGGGTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................AGGATACCCGAGCAACTTTGCATC.......................................................................................... 24 1 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTAAA......................................................... 24 3 2 2.00 4 4 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTATTT....................................................... 27 3 1 2.00 2 2 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCA............................................................ 23 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATAT......................................................................................... 25 1 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTTAT....................................................... 27 2 1 2.00 2 2 0 0
...............................................................AGGCTACCCGAGCAACTTTGCATC.......................................................................................... 24 1 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTA.......................................................... 23 1 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGAGAACCCCTT........................................................... 23 1 1 2.00 2 2 0 0
..................................................................................................TGTTGCTCGGTGAACCCCTA........................................................... 20 1 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAACAACTTTGCATC.......................................................................................... 24 1 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTAAA........................................................ 25 3 1 2.00 2 2 0 0
...............................................................CGGTTACCCGAGCAACTTTGCATC.......................................................................................... 24 1 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCCGTGAACCCCTAA.......................................................... 24 3 1 2.00 2 2 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTTAA........................................................ 27 2 1 2.00 2 2 0 0
.................................................................................................ATGTTGCTCGGTGAACCCCTTTAA........................................................ 24 2 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTAA......................................................... 24 2 1 2.00 2 2 0 0
...............................................................AGGTTACCCGAGCGACTTTGCAT........................................................................................... 23 1 1 2.00 2 2 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCA............................................................ 22 1 1 2.00 2 2 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTAA.......................................................... 23 2 2 1.50 3 3 0 0
................................................................................................AATGTTGCTCGGTGCACCCCTTTT......................................................... 24 1 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTAAT........................................................ 27 3 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCAG........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCAT........................................................................................ 26 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCACCTTTGCATCA......................................................................................... 25 2 1 1.00 1 1 0 0
..............................................................AAGGTTACCCGAGCAACTTTCCATCT......................................................................................... 26 2 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTAGT......................................................... 24 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTCAACCCCTATTT........................................................ 26 3 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCTACTTTGCCT........................................................................................... 23 2 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTGTA....................................................... 26 3 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGTAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................GTTCCCCGAGCAACTTTGCATCT......................................................................................... 23 1 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTTTT....................................................... 26 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTAGA........................................................ 26 3 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGACCCCCTTT.......................................................... 24 1 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCAATT......................................................... 24 2 1 1.00 1 1 0 0
................................................................GGTTACCCGAGCACCTTTGCAT........................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGATCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................................................TGTTGCTCGGTGAACCCCTAT.......................................................... 21 1 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTAAG........................................................ 25 3 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAACACCTTTGCAT........................................................................................... 23 2 1 1.00 1 1 0 0
.................................................................................................ATGTTGCTCGGTGAACCCCTTTTAT....................................................... 25 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGACT........................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACATTGCCT........................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGGTTATCCGAGCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGGGCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................CGGATACCCGAGCAACTTTGCAT........................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGGTTACACGAGCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCCGTGAACCCCTCT.......................................................... 24 2 1 1.00 1 1 0 0
..............................................................CAGGTTACCCGAGCAACTTTGCAT........................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTAGCTT........................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCACCATTGCATCT......................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTATT........................................................ 26 2 1 1.00 1 1 0 0
...............................................................................................GAGTGTTGCTCGGTGAACCCCTAAT......................................................... 25 3 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCCACTTTGCATCA......................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................AGGATACCCGAGCACCTTTGCAT........................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGTTTACCCGAGCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGACCAACTTTGCATCT......................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATTTT....................................................... 27 3 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTAAACCCCTATT......................................................... 25 2 1 1.00 1 1 0 0
...............................................................ATGTTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
..............................................................................................AGAATGTTGCTCGGTGAACCCCTTT.......................................................... 25 1 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTATAT........................................................ 25 3 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACC............................................................... 20 0 1 1.00 1 1 0 0
.................................................................GTTACCCGCGCAACTTTGCATCAG........................................................................................ 24 2 1 1.00 1 1 0 0
................................................................GGTTACCCGAGCAACTTTGCACC.......................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTTAA....................................................... 27 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTGTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACCTTGCCT........................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................TTAGGTTACCCGAGCAACTTTGCATC.......................................................................................... 26 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCAAA........................................................... 23 3 5 1.00 5 5 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTAC.......................................................... 24 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGACCCCCT............................................................ 22 1 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACA............................................................... 20 1 1 1.00 1 1 0 0
..............................................................ACGGTTACCCGAGCAACTTTGCATCT......................................................................................... 26 2 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTTTAT........................................................ 27 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTGTT......................................................... 25 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGCGCAACTTTGCATCT......................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATTT......................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AGGATACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTGGGTGAACCCCT............................................................ 22 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTAG........................................................ 26 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAAC................................................................ 18 0 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTATTAT....................................................... 27 3 1 1.00 1 1 0 0
...............................................................................................GGATGTTGCTCGGTGAACCCCTAA.......................................................... 24 3 1 1.00 1 1 0 0
...............................................................................................GCATGTTGCTCGGTGAACCCCTTAT......................................................... 25 2 1 1.00 1 1 0 0
..............................................................................................CGACTGTTGCTCGGTGCACCCCT............................................................ 23 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGGGAACCCCTTT.......................................................... 24 1 1 1.00 1 1 0 0
...............................................................................................GAATGTAGCTCGGTGAACCCCT............................................................ 22 1 1 1.00 1 1 0 0
...............................................................AGGTTGCCCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCAGTGAACCCCTT........................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTAATCGGTGAACCCCTATT......................................................... 25 3 1 1.00 1 1 0 0
................................................................GGTTACCCGAGCATCTTTGCAT........................................................................................... 22 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTC.......................................................... 24 1 1 1.00 1 1 0 0
................................................................GGTTACCCGAGCAACTTTGCATCT......................................................................................... 24 0 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCATG.......................................................... 24 2 1 1.00 1 1 0 0
........................................................GCGGGAGAGGTTACCCGAGCAACTTTGCAT........................................................................................... 30 3 1 1.00 1 1 0 0
...............................................................CGGTTACCCGAGCAACTTTGCATCAT........................................................................................ 26 3 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGAGAACCCCTTG.......................................................... 24 2 1 1.00 1 1 0 0
...............................................................AGGTTACTCGAGCAACTTTGCATT.......................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCAAT........................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCACCTTTGCA............................................................................................ 22 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCC............................................................. 21 0 1 1.00 1 1 0 0
...............................................................AGGTTACCCGTGCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAAATTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
..................................................................................................TGTTGCTCGGTGAACCCCTTTAA........................................................ 23 2 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCCGTGAACCCCTTTT......................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGAAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTAA........................................................ 25 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGCGCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCTATAA........................................................ 27 3 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACATTGCATCA......................................................................................... 25 2 1 1.00 1 1 0 0
..............................................................AAGGTTACCCGAGCAACTTTGCA............................................................................................ 23 1 1 1.00 1 0 1 0
..............................................................AAGGTTACCCGAGCAACTTTGCATC.......................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AGCTTACCCGAGCCACTTTGCAT........................................................................................... 23 2 1 1.00 1 1 0 0
...............................................................TGGTTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
..............................................................................................CGACTGTTGCTCGGTGAACCCCTTT.......................................................... 25 1 1 1.00 1 1 0 0
...............................................................CGGTTACCCGAGCAACTTTGCATCT......................................................................................... 25 1 1 1.00 1 1 0 0
.........................................................................................GATCAAGAATGTTGCTCGGTGAACCCCT............................................................ 28 3 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCATTT......................................................... 25 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCTTTAT......................................................... 25 2 1 1.00 1 1 0 0
...................................................................TACCCGAGCAACTTTGCATC.......................................................................................... 20 0 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCCA........................................................................................ 26 2 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCTTTA......................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCTAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTCTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GACTGTTGCTCGGTGAACCCCTT........................................................... 23 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTT............................................................................................... 19 0 1 1.00 1 1 0 0
...............................................................CGGTTACCCGAGCAACTTTGCATT.......................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AGGTTACTCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGCTGAACCCCT............................................................ 22 1 1 1.00 1 1 0 0
...............................................................AGATTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCTAT........................................................... 24 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTCGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTAGGTGAACCCCTTG.......................................................... 24 2 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGATGAACCCCTAT.......................................................... 25 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAGCTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCTTTTA........................................................ 26 1 1 1.00 1 1 0 0
...............................................................................................GAACGTTGCTCGGTGAACCCCTGT.......................................................... 24 2 1 1.00 1 1 0 0
...............................................................................................GAGAGTTGCTCGGTGAACCCCT............................................................ 22 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGCGCAACTTTGCATA.......................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCAAGCAACTTTGCATCA......................................................................................... 25 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGAGAACCCCTTT.......................................................... 24 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCTACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................TGGTTACCCGAGCAACTTTGCAGC.......................................................................................... 24 2 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATCTTT....................................................................................... 27 2 1 1.00 1 1 0 0
..............................................................................................CGAATGTTGCTCGGTGAACCCCAA........................................................... 24 2 1 1.00 1 1 0 0
.................................................................GTTACCCGAGCAACTTTGCAT........................................................................................... 21 0 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCTTCT......................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGACCAACTTTGCATC.......................................................................................... 24 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACCCCATTAT........................................................ 26 3 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCT............................................................ 21 0 1 1.00 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTGCATAC......................................................................................... 25 2 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGCACCCCTT........................................................... 22 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCACGGTGAACCCCTTAT......................................................... 25 2 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGATGAACCCCTA........................................................... 23 2 1 1.00 1 1 0 0
...............................................................AGCTTACCCGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AGGTTACCAGAGCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................AGGTTACCCGACCAACTTTGCAT........................................................................................... 23 1 1 1.00 1 1 0 0
...............................................................................................GAATGTTGCTCGGTGAACC............................................................... 19 0 1 1.00 1 1 0 0
...............................................................AGGTTACCTGAGCAACTTTGCATCT......................................................................................... 25 1 1 1.00 1 1 0 0
...............................................................AGATTACCCGAGCAACTTTGCATCT......................................................................................... 25 1 1 1.00 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCAAAT......................................................... 24 3 2 0.50 1 1 0 0
...............................................................AGATTACCCGAGCCACTTTGCAA........................................................................................... 23 3 2 0.50 1 1 0 0
...............................................................................................GAAAGTTGCTCGGTGAACCCCTAA.......................................................... 24 3 2 0.50 1 1 0 0
................................................................................................AATGTTGCTCGGTGCACCCCTAA.......................................................... 23 3 2 0.50 1 1 0 0
...............................................................................................GAATGTTGCTCGGGGAACCCCTAA.......................................................... 24 3 2 0.50 1 1 0 0
...............................................................AGGTTACCCGAGCAAC.................................................................................................. 16 0 2 0.50 1 0 1 0
..............................................................................................CGAATGTTGCTCGGTGAACCCAAA........................................................... 24 3 2 0.50 1 1 0 0
...............................................................AGGTTACCCGAGCCACTTTGCCTT.......................................................................................... 24 3 2 0.50 1 1 0 0
................................................................................................AATGTTGCTCGGTGAACCCCAGA.......................................................... 23 3 3 0.33 1 1 0 0
...............................................................AGGTTACCCGAGCAACTTTCCTA........................................................................................... 23 3 4 0.25 1 1 0 0
................................................................................................AACGTTGCTCGGTGAACCCCTAA.......................................................... 23 3 4 0.25 1 1 0 0
.................................................................................................ATGTTGCTCGGTGACCCCCTTAA......................................................... 23 3 4 0.25 1 1 0 0
...................................................................................................GTTGCTCGGTGAACCCCTAAA......................................................... 21 3 11 0.18 2 2 0 0

Anti-sense strand reads

CCTTTGCGTCGGTAGGTAGCCGGAACAAGACTCGCAGGTTCGGAGAGGTACCATGAGCCTCTCTCCAATGGGCTCGTTGAAACGTAGACCTCCTGCTTACAACGAGCCACTTGGGGAAAAGCCATAGTTTAGGGAGGTCCCTCCGGTTAACCTCCGGGTCGTGGAGTCCCTTCTTGC
*******************************************.((((((.(((((((.((((..(((((((((((((..(((...))))))).)))))))))..)))).)))))))))))))......************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:48 PM