ID:

rno-mir-383

Coordinate:

chr16:57519675-57519748 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

Sense Strand Reads

TTATGCTTACGTAATTTATCAAGAGCCTCCAGAAACTCCACGTCACCTGCTCCTCAGATCAGAAGGTGACTGTGGCTTTGGGTGGATATTAATCAGCCACAGCACTGCCTGGTCAGAAAGAGCAAGTGTCCTAGCCTTTTACCTCATGACACCTTGTGGGTCCATCCAGCATAG
***********************************........(((.(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..))))).)))...........***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528818
Adult_testes_Mili_IP
.......................................................AGATCAGAAGGTGACTGTGGCTA................................................................................................ 23 1 1 4.00 4 4 0
.......................................................AGATCAGAAGGTGACTGTGGCTAT............................................................................................... 24 1 1 2.00 2 2 0
......................................................CAGATCAGAAGGTGACTGTGGCAAT............................................................................................... 25 2 1 2.00 2 2 0
......................................................CAGATCAGAAGGTGACTGTGGCTTT............................................................................................... 25 0 1 1.00 1 1 0
......................................................CAGATCAGAAGGTGACTGTGGCTT................................................................................................ 24 0 1 1.00 1 1 0
......................................................CAGATCAGAAGGTGACTGTGGCTA................................................................................................ 24 1 1 1.00 1 1 0
.......................................................AGATCAGAAGGTGACTGTGGCT................................................................................................. 22 0 1 1.00 1 1 0
......................................................CAGCTCAGAAGGTGACTGTGGCAT................................................................................................ 24 2 1 1.00 1 1 0
......................................................CAGATCAGAAGGTGACTGTGGCTTA............................................................................................... 25 1 1 1.00 1 0 1
......................................................CAGATCAGAAGGTGACTGTGGC.................................................................................................. 22 0 1 1.00 1 1 0
.......................................................AGATCAGAAGGTGACTGTGGCTTTA.............................................................................................. 25 1 1 1.00 1 1 0
......................................................CAGATCAGAAGGTGACTGTGGTA................................................................................................. 23 2 3 0.33 1 1 0
.................................................................................................CACAGCACTGCCTGGTCAGAATTT..................................................... 24 3 4 0.25 1 1 0

Anti-sense strand reads

AATACGAATGCATTAAATAGTTCTCGGAGGTCTTTGAGGTGCAGTGGACGAGGAGTCTAGTCTTCCACTGACACCGAAACCCACCTATAATTAGTCGGTGTCGTGACGGACCAGTCTTTCTCGTTCACAGGATCGGAAAATGGAGTACTGTGGAACACCCAGGTAGGTCGTATC
***********************************........(((.(((((.((.((((((..((((.((((((((...(((........)))))))))))))))..)))))).))..))))).)))...........***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM