ID:rno-mir-381 |
Coordinate:chr6:133876615-133876675 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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| -40.8 | -40.8 | -40.0 |
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CCCGTGAATGCTAGAGCGGAACCTGCCCCATGCTATTGTTTGGTACTTAAAGCGAGGTTGCCCTTTGTATATTCGGTTTATTGACATGGGATATACAAGGGCAAGCTCTCTGTGAGCATCAAACCTTATCTTGGATCCTGTCCACACTCAGCGAGGGATGT
***********************************..(((((((.((((.((.(((.((((((((.((((((((.((........)).)))))))))))))))).))).)).)))).)))))))..*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................................TATACAAGGGCAAGCTCTCTGT................................................ | 22 | 0 | 1 | 240.00 | 240 | 239 | 1 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTT............................................... | 23 | 1 | 1 | 124.00 | 124 | 123 | 0 | 1 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAA.............................................. | 24 | 1 | 1 | 61.00 | 61 | 61 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAT.............................................. | 24 | 2 | 1 | 51.00 | 51 | 51 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTA............................................... | 23 | 1 | 1 | 36.00 | 36 | 35 | 1 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTT.............................................. | 24 | 2 | 1 | 31.00 | 31 | 31 | 0 | 0 |
| ..................................................AGCGAGGTTGCCCTTTGTATATT........................................................................................ | 23 | 0 | 1 | 24.00 | 24 | 23 | 1 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTA.............................................. | 24 | 1 | 1 | 17.00 | 17 | 17 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGCTCTCTGT................................................ | 21 | 0 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGT................................................ | 23 | 0 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGCTCTCTGTT............................................... | 22 | 1 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTTT............................................. | 25 | 3 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGA................................................ | 22 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAAA............................................. | 25 | 2 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTG................................................. | 21 | 0 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAAT............................................. | 25 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTAA............................................. | 25 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .............................................................................................TACAAGGGCAAGCTCTCTGTAA.............................................. | 22 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGAA............................................... | 23 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTAA................................................ | 22 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTG............................................... | 23 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGAAT.............................................. | 24 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTAT............................................. | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTGT.............................................. | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGCTCTCTGTTT.............................................. | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..................................................AGCGAGGTTGCCCTTTGTATATTT....................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGAT............................................... | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCT.................................................. | 20 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGTTA.............................................. | 25 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................................TATACAAGGGCCAGCTCTCTGT................................................ | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGTT............................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGTAT.............................................. | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................AATATACAAGGGCAAGCTCTCTGTAA.............................................. | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGAG............................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGA................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTC................................................... | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGCT............................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAAG............................................. | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTTTT............................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTAG............................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................AGCGAGGTTGCCCTTTGTAA........................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTCT.............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGCTCTCTGTAA.............................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAGT............................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAACTCTCTGTA............................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATCCAAGGGCAAGCTCTCTG................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGCTCTCTGTAAA............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................................GTTTATACAAGGGCAAGCTCTCT.................................................. | 23 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .........................................................................................AATATACAAGGGCAAGCTCTCTGT................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTTTA............................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATAGAAGGGCAAGCTCTCTGT................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGATCTCTGTT............................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................CGGTTTATTGACATGGGATATACAAGGG............................................................ | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................ATACACAAGGGCAAGCTCTCTGT................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGATCTCTGT................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAAAG............................................ | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................AATACAAGGGCAAGCTCTCTGTAA.............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................AGCGAGGTTGCCCTTTGTATATTAT...................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATCCAAGGGCAAGCTCTCTGTAT.............................................. | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ...........................................................................................TATCCAAGGGCAAGCTCTCTGT................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGAGA.............................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGCA............................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................TACAAGGGCAAGCTCTCTGTT............................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGAT............................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGCA............................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACACGGGCAAGCTCTCTGC................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATCCAAGGGCAAGCTCTCTGTTA.............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................AATACAAGGGCAAGCTCTCTGTT............................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTGTAAT............................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGCGA.............................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGCTA.............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATCCAAGGGCAAGCTCTCTGTT............................................... | 23 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ...........................................................................................CATACAAGGGCAAGCTCTCTGTAA.............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATTCAAGGGCAAGCTCTCTGT................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTTTGT................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................GATACAAGGGCAAGCTCTCTGTT............................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAG.............................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................AGCGAGGTTGCCCTTTGTATATTC....................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGCAT.............................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTAAAA............................................ | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTGTTAAA............................................ | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .........................................................................................AATATGCAAGGGCAAGCTCTCTGTAA.............................................. | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTCTCTATAC.............................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................................AAATATACAAGGGCAAGCTCTATGT................................................ | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCACGCTCTCTTTT............................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................................ATATACAAGGGCAAGCTCTCTTAA............................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAAGGCAAGCTCTCTGTAA.............................................. | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ............................................................................................ATACAAGGGCAAGCTCTCTGTAAAA............................................ | 25 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGCAAGCTTTCTTTAA.............................................. | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGCCAAGCTCTCTGTTT.............................................. | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ...........................................................................................TATACAAGGGAAAGCTCTCTGTAT.............................................. | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
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GGGCACTTACGATCTCGCCTTGGACGGGGTACGATAACAAACCATGAATTTCGCTCCAACGGGAAACATATAAGCCAAATAACTGTACCCTATATGTTCCCGTTCGAGAGACACTCGTAGTTTGGAATAGAACCTAGGACAGGTGTGAGTCGCTCCCTACA
***********************************..(((((((.((((.((.(((.((((((((.((((((((.((........)).)))))))))))))))).))).)).)))).)))))))..*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:47 PM