ID:rno-mir-380 |
Coordinate:chr6:133860490-133860566 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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GATAATCATGAGGAAAGAAGCCAGCTCCTACGCCACCCTCTCTCCATGGTACCTGAAAAGATGGTTGACCATAGAACATGCGCTACTTCTGTGTCGTATGTAGTATGGTCCACATCTTCTCATTATCAAAGTCATTCGTGGAGGGTTTTCCAGAGGCCGAGCCAACTTCATGGGAGA
*********************************************.(((((..(((.((((((...(((((((..(((((((.(((....))).)))))))..)))))))..)))))).))).)))))....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ............................................................ATGGTTGACCATAGAACATGCG............................................................................................... | 22 | 0 | 1 | 70.00 | 70 | 70 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGA.............................................................................................. | 23 | 1 | 1 | 64.00 | 64 | 59 | 5 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGT.............................................................................................. | 23 | 1 | 1 | 31.00 | 31 | 30 | 0 | 1 |
| ................................................................................................TATGTAGTATGGTCCACATCT............................................................ | 21 | 0 | 1 | 29.00 | 29 | 29 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGC................................................................................................ | 21 | 0 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTA.......................................................... | 23 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTAA......................................................... | 24 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGC.............................................................................................. | 23 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTAT.......................................................... | 23 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGTT............................................................................................. | 24 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGCT............................................................................................. | 24 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..............................................................GGTTGACCATAGAACATGCG............................................................................................... | 20 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................TGGTTGACCATAGAACATGCGT.............................................................................................. | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTAT......................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTT.......................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATC............................................................. | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTA........................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGAA............................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTAG......................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTAAA......................................................... | 24 | 3 | 4 | 1.50 | 6 | 6 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGTAT............................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTTCACATCTT........................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATT............................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................TGGTTGACCATAGCACATGCGA.............................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAAAATGC................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTCGACCATAGAACATGCG............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTAA.......................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGCTACTT......................................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGAT............................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGAAT............................................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................TGACCATAGAACATGCGCTACTTT........................................................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACAAGCGA.............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGCTA............................................................................................ | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCGG.............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACCTGCGA.............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTT........................................................... | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCC............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCCTAGAACATGCG............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAAAATGCGC.............................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................AATCGTTGACCATAGAACATGCG............................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGCACATGCGT.............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCA............................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTCTGGTCCACATCT............................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGAACATGCT............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATACAACATGCGT.............................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATAGCACATGCG............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGACCATACAACATGCG............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTTAAA....................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................ATATGTAGTATGGTCCACATCT............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGATCATAGAACATGCG............................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................ATGGTTGAACATAGAACATGCT............................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTCTGGTCCACATCTTAA......................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTAAG........................................................ | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCCACATCTTAAA........................................................ | 25 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGGTCAACATCTTA.......................................................... | 23 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ................................................................................................TATGTAGTATGATCCACATCTGT.......................................................... | 23 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 |
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CTATTAGTACTCCTTTCTTCGGTCGAGGATGCGGTGGGAGAGAGGTACCATGGACTTTTCTACCAACTGGTATCTTGTACGCGATGAAGACACAGCATACATCATACCAGGTGTAGAAGAGTAATAGTTTCAGTAAGCACCTCCCAAAAGGTCTCCGGCTCGGTTGAAGTACCCTCT
*********************************************.(((((..(((.((((((...(((((((..(((((((.(((....))).)))))))..)))))))..)))))).))).)))))....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
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Generated: 04/30/2015 at 05:47 PM