ID:

rno-mir-378a

Coordinate:

chr18:56726150-56726214 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.7 -49.3 -49.1

Sense Strand Reads

GTGAGCTGCTTGTCCACGACCACTCAGCCAGGGGGTGACAGAGCCACCCAGGGCTCCTGACTCCAGGTCCTGTGTGTTACCTCGAAATAGCACTGGACTTGGAGTCAGAAGGCCTGAGTGGAGTCACCTTCCCCGCTCTCTGGCTGGGTGATCCTGGAGCAAGCC
**************************************..((.((((.((((.((.((((((((((((((...((((((........)))))).)))))))))))))).)).)))).))))..))...*************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
...........................................................................................ACTGGACTTGGAGTCAGAAGGC.................................................... 22 0 1 985.00 985 511 474 0
...........................................................................................ACTGGACTTGGAGTCAGAAGG..................................................... 21 0 1 479.00 479 131 348 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGA.................................................... 22 1 2 173.00 346 156 190 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCA................................................... 23 1 2 150.50 301 259 42 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAT.................................................. 24 1 1 143.00 143 134 9 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTCG.................................................. 24 2 2 71.00 142 0 0 142
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAA.................................................. 24 2 2 68.50 137 126 11 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCT................................................... 23 1 2 61.00 122 96 26 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCCG.................................................. 24 1 1 52.00 52 0 0 52
............................................................................................CTGGACTTGGAGTCAGAAGGC.................................................... 21 0 1 47.00 47 14 33 0
.....................................................CTCCTGACTCCAGGTCCTGTGT.......................................................................................... 22 0 1 37.00 37 34 3 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGT.................................................... 22 1 2 35.00 70 42 28 0
...........................................................................................ACTGGACTTGGAGTCAGAAG...................................................... 20 0 5 33.60 168 38 130 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAA................................................... 23 2 4 31.75 127 110 17 0
............................................................................................CTGGACTTGGAGTCAGAAGG..................................................... 20 0 1 27.00 27 5 22 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTT.................................................. 24 1 1 19.00 19 19 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGTTT........................................................................................ 24 1 1 17.00 17 17 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGTAA........................................................................................ 24 2 1 16.00 16 16 0 0
...........................................................................................GCTGGACTTGGAGTCAGAAGGC.................................................... 22 1 1 15.00 15 11 4 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTA................................................... 23 2 3 12.33 37 35 2 0
.....................................................CTCCTGACTCCAGGTCCTGTGTAT........................................................................................ 24 1 1 11.00 11 11 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCAT.................................................. 23 1 1 10.00 10 9 1 0
.....................................................CTCCTGACTCCAGGTCCTGTGTCG........................................................................................ 24 2 1 9.00 9 0 0 9
............................................................................................CTGGACTTGGAGTCAGAAGGCA................................................... 22 1 2 9.00 18 17 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGCAA.................................................. 23 2 3 8.33 25 23 2 0
...........................................................................................GCTGGACTTGGAGTCAGAAGG..................................................... 21 1 1 8.00 8 2 6 0
......................................................TCCTGACTCCAGGTCCTGTGT.......................................................................................... 21 0 1 8.00 8 8 0 0
......................................................TCCTGACTCCAGGTCCTGTGTGA........................................................................................ 23 1 1 8.00 8 8 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGTGT........................................................................................ 24 0 1 7.00 7 7 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAG.................................................. 24 2 2 6.50 13 11 2 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTT................................................. 25 2 2 6.50 13 13 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAAT................................................. 25 3 3 6.33 19 19 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAGGC.................................................... 23 1 1 6.00 6 1 5 0
...........................................................................................ACTGGACTTGTAGTCAGAAGGC.................................................... 22 1 1 6.00 6 0 6 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAAT.................................................. 24 2 2 6.00 12 12 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCT................................................... 22 1 2 5.50 11 8 3 0
...........................................................................................ACTGGACTTGGAGTCAGAA....................................................... 19 0 5 5.40 27 13 14 0
............................................................................................CTGGACTTGGAGTCAGAAGGTCG.................................................. 23 2 3 5.33 16 0 0 16
...........................................................................................ACTGGACTTGGAGTCGGAAGGC.................................................... 22 1 1 5.00 5 2 3 0
.....................................................CTCCTGACTCCAGGTCCTGTGTA......................................................................................... 23 1 1 5.00 5 5 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCGT.................................................. 24 1 1 4.00 4 4 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTAT................................................. 25 3 3 4.00 12 11 1 0
.....................................................CTCCTGACTCCAGGTCCTGTGTT......................................................................................... 23 1 1 4.00 4 4 0 0
..........................................................................................CACTGGACTTGGAGTCAGAAGGC.................................................... 23 0 1 4.00 4 4 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCC................................................... 23 0 1 4.00 4 0 4 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTAT.................................................. 24 2 2 3.50 7 7 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTA.................................................. 23 2 2 3.50 7 7 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTA.................................................. 24 2 2 3.50 7 6 1 0
...........................................................................................GCTGGACTTGGAGTCAGAAGGTCG.................................................. 24 3 4 3.50 14 0 0 14
............................................................................................CTGGACTTGGAGTCAGAAGGCTTA................................................. 24 2 1 3.00 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAAGA................................................ 26 2 1 3.00 3 3 0 0
.......................................................CCTGACTCCAGGTCCTGTGTGTTAT..................................................................................... 25 1 1 3.00 3 3 0 0
...........................................................................................ACCGGACTTGGAGTCAGAAGGC.................................................... 22 1 1 3.00 3 1 2 0
.....................................................CTCCTGACTCCAGGTCCTGTG........................................................................................... 21 0 1 3.00 3 2 1 0
.....................................................CTCCTGACTCCAGGTCCTGTGTTA........................................................................................ 24 2 1 3.00 3 3 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGA.......................................................................................... 22 1 1 3.00 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAT................................................... 23 2 4 3.00 12 10 2 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCATT................................................. 25 2 2 3.00 6 6 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCGA.................................................. 23 2 1 3.00 3 3 0 0
......................................................TCCTGACTCCAGGTCCTGTGTT......................................................................................... 22 1 1 3.00 3 3 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGT.................................................... 21 1 2 3.00 6 3 3 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGC.................................................... 22 1 1 3.00 3 3 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAGG..................................................... 22 1 1 3.00 3 0 3 0
...........................................................................................ATTGGACTTGGAGTCAGAAGGC.................................................... 22 1 1 3.00 3 0 3 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCG................................................... 23 1 1 3.00 3 2 0 1
............................................................................................CTGGACTTGGAGTCAGAAGGA.................................................... 21 1 3 3.00 9 3 6 0
......................................................TCCTGACTCCAGGTCCTGTGTGT........................................................................................ 23 0 1 3.00 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTAA.................................................. 24 3 5 2.60 13 13 0 0
...........................................................................................ACTGGACTTGGAGTCGGAAGGCA................................................... 23 2 2 2.50 5 4 1 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGTCG.................................................. 24 3 2 2.00 4 0 0 4
...........................................................................................ACTGGACTTGGAGTCGGAAGG..................................................... 21 1 1 2.00 2 1 1 0
...........................................................................................CCTGGACTTGGAGTCAGAAGGC.................................................... 22 1 1 2.00 2 2 0 0
.............................................................................................TGGACTTGGAGTCAGAAGGC.................................................... 20 0 1 2.00 2 0 2 0
......................................................TCCTGACTCCAGGTCCTGTGTGTT....................................................................................... 24 0 1 2.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAAGT................................................ 26 3 1 2.00 2 2 0 0
...........................................................................................ACTGGCCTTGGAGTCAGAAGGC.................................................... 22 1 1 2.00 2 2 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTTAA................................................ 25 2 1 2.00 2 2 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGTTAT....................................................................................... 25 2 1 2.00 2 2 0 0
...........................................................................................CCTGGACTTGGAGTCAGAAGG..................................................... 21 1 1 2.00 2 0 2 0
...........................................................................................ACTGGACTTGGAGTCAGACGG..................................................... 21 1 1 2.00 2 1 1 0
...........................................................................................ACCGGACTTGGAGTCAGAAGG..................................................... 21 1 1 2.00 2 1 1 0
.............................................................................................TGGACTTGGAGTCAGAAGGCAT.................................................. 22 1 1 2.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCATAAGG..................................................... 21 1 1 2.00 2 0 2 0
...........................................................................................ACTGGGCTTGGAGTCAGAAGGC.................................................... 22 1 1 2.00 2 0 2 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAGT................................................. 25 3 3 2.00 6 6 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGACG.................................................. 24 2 2 2.00 4 0 0 4
......................................................TCCTGACTCCAGGTCCTGTGTGTTT...................................................................................... 25 1 1 2.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTAT................................................ 26 3 1 2.00 2 2 0 0
...........................................................................................TCTGGACTTGGAGTCAGAAGGCCG.................................................. 24 2 1 2.00 2 0 0 2
...........................................................................................ACTGGACTTGGAGTCAGAAGGGCG.................................................. 24 2 2 2.00 4 0 0 4
..........................................................................................AACTGGACTTGGAGTCAGAAGGCAT.................................................. 25 2 1 2.00 2 1 1 0
...........................................................................................ACTGGACTTGGAGCCAGAAGGTCG.................................................. 24 3 2 2.00 4 0 0 4
.....................................................CTCCTGACTCCAGGTCCTGTGTATA....................................................................................... 25 2 1 2.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGACGGCAT.................................................. 24 2 1 2.00 2 2 0 0
...........................................................................................ACTGAACTTGGAGTCAGAAGGC.................................................... 22 1 1 2.00 2 0 2 0
...........................................................................................ACTGGACTTGGAGTCAGA........................................................ 18 0 6 1.83 11 5 6 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTTAAT.............................................. 28 3 2 1.50 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTT................................................... 23 2 4 1.50 6 6 0 0
.............................................................................................TGGACTTGGAGTCAGAAGG..................................................... 19 0 2 1.50 3 1 2 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTTT................................................ 26 3 2 1.50 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGG.................................................... 22 1 2 1.50 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCATAT................................................ 26 3 2 1.50 3 3 0 0
............................................................................................CTGGACTTGGAGTCAGAAG...................................................... 19 0 5 1.40 7 0 7 0
...........................................................................................ACCGGACTTGGAGTCAGAAGGA.................................................... 22 2 3 1.33 4 1 3 0
...........................................................................................ATTGGACTTGGAGTCAGAAGG..................................................... 21 1 3 1.33 4 0 4 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTAG.................................................. 24 3 3 1.33 4 3 0 1
...........................................................................................ACTGTACTTGGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAG................................................... 23 2 2 1.00 2 1 1 0
......................................................TCCTGACTCCAGGTCCTGTGTGTTTT..................................................................................... 26 2 1 1.00 1 1 0 0
.....................................................CACCTGACTCCAGGTCCTGTGT.......................................................................................... 22 1 1 1.00 1 0 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTTT................................................. 24 2 3 1.00 3 3 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAGGCA................................................... 24 2 2 1.00 2 1 1 0
...........................................................................................ACTGGACTTGGAGTCAAAAGG..................................................... 21 1 1 1.00 1 1 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGTGA........................................................................................ 24 1 1 1.00 1 1 0 0
....................................................ACTCCTGACTCCAGGTCCTGTGTAA........................................................................................ 25 3 2 1.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCATA................................................. 25 2 2 1.00 2 2 0 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGCG................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................ACTCGACTTGGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTTTAT............................................... 26 3 2 1.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCATAAGGC.................................................... 22 1 1 1.00 1 0 1 0
......................................................TCCTGACTCCAGGTCCTGTGTAAT....................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................ACGGGACTTGGAGTCAGAAGG..................................................... 21 1 1 1.00 1 0 1 0
.......................................................CCTGACTCCAGGTCCTGTGTGTTAAT.................................................................................... 26 2 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGTC.................................................... 22 1 4 1.00 4 0 4 0
.....................................................CTCCTGACTCCAGGTCCTGTGAAT........................................................................................ 24 2 2 1.00 2 2 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGTGTTT...................................................................................... 26 1 1 1.00 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCCT.................................................. 23 0 1 1.00 1 0 1 0
.....................................................CTCTTGACTCCAGGTCCTGTGTGT........................................................................................ 24 1 1 1.00 1 1 0 0
...........................................................................................ACCGGACTTGGAGTCAGAAGGCAT.................................................. 24 2 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGCAGTCAGAAGGC.................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTTAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGGGTCAGAAGG..................................................... 21 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGCGTGAGAAGGC.................................................... 22 2 1 1.00 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTAA................................................. 24 3 4 1.00 4 3 0 1
...........................................................................................ACTGGACTTGGAGGCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................GCTGGACTTGGAGTCAGAAGGCG................................................... 23 2 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCACAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTTGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
......................................................TCCTGACTCCAGGTCCTGTGTGTTA...................................................................................... 25 0 1 1.00 1 1 0 0
...........................................................................................TCTGGACTTGGAGTCAGAAGGCCT.................................................. 24 1 1 1.00 1 1 0 0
......................................................TCCTGACTCCAGGTCCTGTGTATTAT..................................................................................... 26 2 1 1.00 1 1 0 0
.......................................................CCTGACTCCAGGTCCTGTGTGTTA...................................................................................... 24 0 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCATTT................................................ 26 3 2 1.00 2 1 1 0
.........................................................................................CAACTGGACTTGGAGTCAGAAGGC.................................................... 24 2 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTTA................................................ 26 2 2 1.00 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGCAGG..................................................... 21 1 1 1.00 1 0 1 0
.......................................................CCTGACTCCAGGTCCTGTGTGT........................................................................................ 22 0 1 1.00 1 1 0 0
......................................................TCCTGACTCCAGGTCCTGTGTGAA....................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................AATGGACTTGGAGTCAGAAGG..................................................... 21 1 2 1.00 2 0 2 0
............................................................................................CTGGACTTGTAGTCAGAAGGCAT.................................................. 23 2 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTCGAGTCAGAAGGCAT.................................................. 24 2 1 1.00 1 0 1 0
...........................................................................................ACTAGACTTGGAGTAAGAAGGC.................................................... 22 2 1 1.00 1 0 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTTAT................................................ 25 3 1 1.00 1 1 0 0
...........................................................................................GCTGGACTTGGAGTCAGAAGGCAT.................................................. 24 2 1 1.00 1 1 0 0
...........................................................................................TCTGGACTTGGAGTCAGAAGGCAT.................................................. 24 2 1 1.00 1 1 0 0
...........................................................................................GCTGGACTTGGAGTCAGAAGGCCG.................................................. 24 2 1 1.00 1 0 0 1
...........................................................................................GCTGGACTTGGAGTCAGAAGGCT................................................... 23 2 2 1.00 2 1 1 0
...........................................................................................ACTGGACTTGAAGTCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCGGAAGGCT................................................... 23 2 2 1.00 2 2 0 0
...........................................................................................ACGGGACTTGGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGCCA.................................................. 23 1 1 1.00 1 1 0 0
...........................................................................................ACTTGACTTGGAGTCAGAAGG..................................................... 21 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGCA................................................... 23 2 2 1.00 2 2 0 0
..........................................................................................AGCTGGACTTGGAGTCAGAAGGC.................................................... 23 2 1 1.00 1 0 1 0
............................................................................................CTGGACTTGGAGTCGGAAGGC.................................................... 21 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCGGAAGGCTTT................................................. 25 3 2 1.00 2 2 0 0
......................................................TCCTGACTCCAGGTCCTGTGTA......................................................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGAAGTCAGAAGG..................................................... 21 1 1 1.00 1 1 0 0
...........................................................................................AATGGACTTGGAGTCAGAAGGCAT.................................................. 24 2 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCACAAGGCA................................................... 23 2 2 1.00 2 1 1 0
.....................................................ATCCTGACTCCAGGTCCTGTGT.......................................................................................... 22 1 2 1.00 2 1 1 0
...........................................................................................ACTGGAATTGGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGCCAGAAGGC.................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCCGAAGGC.................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAAC................................................. 25 3 3 1.00 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGACGGC.................................................... 22 1 1 1.00 1 1 0 0
......................................................TCCTGCCTCCAGGTCCTGTGTGT........................................................................................ 23 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTA................................................. 25 2 1 1.00 1 1 0 0
...........................................................................................ACTGCACTTGGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................AGTGGACTTGGAGTCAGAAGGC.................................................... 22 1 2 1.00 2 0 2 0
...........................................................................................AATGGACTTGGAGTCAGAAGGC.................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAA...................................................... 20 1 6 1.00 6 2 4 0
.....................................................CTCCTGACTCCAGGTCCTGTGAG......................................................................................... 23 1 1 1.00 1 0 1 0
............................................................................................CTTGACTTGGAGTCAGAAGGC.................................................... 21 1 1 1.00 1 0 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGTTT.................................................. 23 2 3 1.00 3 3 0 0
...........................................................................................GCTGGACTTGGAGTCAGAAGGCA................................................... 23 2 2 1.00 2 1 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTTAAT............................................... 27 3 1 1.00 1 1 0 0
......................................................TCCTGACTCCAGGTCCTGTG........................................................................................... 20 0 1 1.00 1 0 1 0
.....................................................CTCCTGACTCCAGGTCCTGTGAGT........................................................................................ 24 1 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGTGAGAAGG..................................................... 21 1 1 1.00 1 0 1 0
.......................................................CCTGACTCCAGGTCCTGTGTGTTT...................................................................................... 24 1 1 1.00 1 1 0 0
...........................................................................................ACTGTACTTGGAGTCAGAAGG..................................................... 21 1 1 1.00 1 0 1 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGCCG.................................................. 24 2 1 1.00 1 0 0 1
...........................................................................................ACTGGACTTGGAGTCAGAAGGCAAGC................................................ 26 3 1 1.00 1 1 0 0
...........................................................................................ACTGGACTTGGAGACAGAAGGC.................................................... 22 1 2 1.00 2 2 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTAT................................................. 24 3 5 0.80 4 4 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCTGA................................................. 25 3 4 0.75 3 3 0 0
...........................................................................................ACTGGACTTGTAGTCAGAAGGA.................................................... 22 2 3 0.67 2 0 2 0
...........................................................................................AATGGACTTGGAGTCAGAAGGA.................................................... 22 2 3 0.67 2 1 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGT..................................................... 21 1 6 0.67 4 0 4 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTG................................................... 23 2 3 0.67 2 2 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAGGA.................................................... 23 2 3 0.67 2 1 1 0
................................................................................................ACTTGGAGTCAGAAGG..................................................... 16 0 3 0.67 2 0 2 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGGA................................................... 23 2 3 0.67 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGACGGTCG.................................................. 24 3 3 0.67 2 0 0 2
...........................................................................................ACTGGGCTTGGAGTCAGAAGGTAT.................................................. 24 3 3 0.67 2 2 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGTA................................................... 22 2 5 0.60 3 3 0 0
.............................................................................................TGGACTTGGAGTCAGAAGGCA................................................... 21 1 2 0.50 1 1 0 0
...........................................................................................TCTGGACTTGGCGTCAGAAGGC.................................................... 22 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGTGTCAGAAGGA.................................................... 22 2 2 0.50 1 1 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAGGT.................................................... 23 2 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAC................................................... 23 1 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCATTAT............................................... 27 3 2 0.50 1 1 0 0
......................................................TCATGACTCCAGGACCTGTGTGTT....................................................................................... 24 2 2 0.50 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCCTTAA............................................... 26 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAATCAGAAGGCAT.................................................. 24 2 2 0.50 1 1 0 0
...........................................................................................ACTGGCCTTGGAGTTAGAAGGC.................................................... 22 2 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCGGAAGGCAA.................................................. 24 3 2 0.50 1 1 0 0
..............................................................................................GGACTTGGAGTCAGAAGG..................................................... 18 0 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCATAA................................................ 26 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGCAGGTCG.................................................. 24 3 2 0.50 1 0 0 1
...........................................................................................AATGGACTTGGAGTCAGAAGGCA................................................... 23 2 2 0.50 1 0 1 0
.....................................................ATCCTGACTCCAGGTCCTGTG........................................................................................... 21 1 2 0.50 1 0 1 0
......................................................TCCTGACTCCAGGTCCTGTGTAAAA...................................................................................... 25 3 2 0.50 1 1 0 0
............................................................................................CTGGACTTGGAGTCGGAAGGCT................................................... 22 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGA.................................................... 22 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGCCAAT................................................ 26 3 2 0.50 1 1 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGATAT....................................................................................... 25 3 2 0.50 1 1 0 0
...........................................................................................ACTGGGCTTGGAGTCAGAAGGA.................................................... 22 2 4 0.50 2 1 1 0
...........................................................................................ACTGGACTTGGAGTTAGAAGGCA................................................... 23 2 2 0.50 1 0 1 0
............................................................................................CAGGACTTGGAGTCAGAAGG..................................................... 20 1 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTAAGAAGGTCG.................................................. 24 3 2 0.50 1 0 0 1
...........................................................................................ACTGGACTTGGAGACAGAAGGCAT.................................................. 24 2 2 0.50 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTATAG............................................... 26 3 2 0.50 1 1 0 0
..............................................................................................GGACTTGGAGTCAGAAGGCA................................................... 20 1 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAATT................................................. 25 3 8 0.50 4 4 0 0
...........................................................................................ACTGGACTTGGAGACAGAAGG..................................................... 21 1 2 0.50 1 1 0 0
..........................................................................................CACTGGACTTGGAGTCAGAAGGTA................................................... 24 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGCCAGAAGGT.................................................... 22 2 2 0.50 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTTTT................................................ 25 3 6 0.50 3 0 0 3
.....................................................CTCCTGACTCCAGGTCCTGTGTAAA....................................................................................... 25 3 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAAAAGGACG.................................................. 24 3 2 0.50 1 0 0 1
.................................................................................................CTTGGAGTCAGAAGGC.................................................... 16 0 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTAAGAAGGCT................................................... 23 2 2 0.50 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGTCT.................................................. 23 1 2 0.50 1 0 0 1
...........................................................................................ACTGGACTTGGAGACAGAAGGCCG.................................................. 24 2 2 0.50 1 0 0 1
...........................................................................................ACTGGACTTGGACTCAGAAGGCA................................................... 23 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCCGAAGGCA................................................... 23 2 2 0.50 1 1 0 0
....................................................ACTCCTGACTCCAGGTCCTGT............................................................................................ 21 1 2 0.50 1 0 1 0
...........................................................................................ACTGGCCTTGGAGTCAGAAGG..................................................... 21 1 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTTAGAAGG..................................................... 21 1 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTGT.................................................. 24 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAG......................................................... 17 0 6 0.50 3 0 3 0
............................................................................................CTGGACTTGGAGTCAGAAGGCATT................................................. 24 2 2 0.50 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTCCG................................................. 25 2 2 0.50 1 0 0 1
..........................................................................................CGCTGGACTTGGAGTCAGAAGGT.................................................... 23 2 2 0.50 1 1 0 0
...........................................................................................ACTGTACTTGGAGTCAGAAGGCA................................................... 23 2 2 0.50 1 1 0 0
...........................................................................................ACTGTACTTGGAGTCAGAAGGCT................................................... 23 2 2 0.50 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTTAAA............................................... 26 3 2 0.50 1 1 0 0
...........................................................................................ACTGGTCTTGGAGTCAGAAGGTCG.................................................. 24 3 2 0.50 1 0 0 1
.........................................................................................GCACTGGACTTGGAGTCAGA........................................................ 20 0 2 0.50 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCGGAAGGCATA................................................. 25 3 2 0.50 1 1 0 0
...........................................................................................AATGGACTTGGAGTCAGAAG...................................................... 20 1 7 0.43 3 0 3 0
.....................................................CTCCTGACTCCAGGTCCTGTGTTAA....................................................................................... 25 3 5 0.40 2 2 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGCAAT................................................. 24 3 5 0.40 2 2 0 0
............................................................................................CTGGACTTGGAGTCCGAAGGTCG.................................................. 23 3 3 0.33 1 0 0 1
...........................................................................................ACTGGACTCGGAGTCAGAAGGCA................................................... 23 2 3 0.33 1 1 0 0
............................................................................................CTGGACTTGGAGTCAGAAGGTTA.................................................. 23 3 9 0.33 3 3 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGTATT................................................. 25 3 3 0.33 1 1 0 0
.....................................................CTCCTGACTCCAGGTCCTGTGAA......................................................................................... 23 2 3 0.33 1 1 0 0
...........................................................................................ACTGGACTTCGAGTCAGAAGGA.................................................... 22 2 3 0.33 1 0 1 0
...........................................................................................ACTGGAATTGGAGTCAGAAGGA.................................................... 22 2 6 0.33 2 1 1 0
...........................................................................................ACTGGAATTGGAGTCAGAAGGTCG.................................................. 24 3 3 0.33 1 0 0 1
...........................................................................................ACTGGACTTGGAGTCAGAAGGTTT.................................................. 24 2 3 0.33 1 1 0 0
...........................................................................................ACTGGACTTGGAGCCAGAAGGTAT.................................................. 24 3 3 0.33 1 1 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAG...................................................... 21 1 6 0.33 2 1 1 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGCTTT................................................. 25 3 3 0.33 1 1 0 0
..........................................................................................AACTGGACTTGGAGTCAGAAGGCAA.................................................. 25 3 3 0.33 1 0 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGCATTT................................................ 25 3 3 0.33 1 0 0 1
...........................................................................................AGTGGACTTGGAGTGAGAAGGC.................................................... 22 2 3 0.33 1 0 1 0
...........................................................................................ACTGGACTAGGAGTCAGAAGGG.................................................... 22 2 3 0.33 1 1 0 0
...........................................................................................CCTGGACTTGGAGTCAGAAGGCA................................................... 23 2 3 0.33 1 1 0 0
..........................................................................................AACTGGAATTGGAGTCAGAAGG..................................................... 22 2 3 0.33 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGAAGTCAT.................................................. 24 2 3 0.33 1 1 0 0
...........................................................................................TCTGGACTTGGAGTCAGAAGGCT................................................... 23 2 3 0.33 1 1 0 0
...........................................................................................AATGGACTTGGAGTCAGAAGGCT................................................... 23 2 3 0.33 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCGGAAGGCAG.................................................. 24 3 3 0.33 1 1 0 0
...........................................................................................ACTGGACTTGGAGACAGAAGGCA................................................... 23 2 3 0.33 1 1 0 0
...........................................................................................ACTGGACTTGGCGTCAGAAGGAT................................................... 23 3 7 0.29 2 2 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAAG.................................................. 24 3 7 0.29 2 1 1 0
............................................................................................CTGGACTTGGAGTCAGAAGGCTGAA................................................ 25 3 4 0.25 1 1 0 0
...........................................................................................ACTGTACTTGGAGTCAGAAGGT.................................................... 22 2 4 0.25 1 0 1 0
...........................................................................................ACTGGACTTGGAGTCAGACGGGT................................................... 23 3 4 0.25 1 1 0 0
...........................................................................................ACTGGACTTGGACTCAGAAGGCAA.................................................. 24 3 4 0.25 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCATAAGGA.................................................... 22 2 4 0.25 1 0 1 0
...........................................................................................ACTGGACTTGGAGACAGAAGGA.................................................... 22 2 8 0.25 2 2 0 0
...........................................................................................ATTGGACTTGGAGTCAGAAGGA.................................................... 22 2 4 0.25 1 0 1 0
...........................................................................................ACTGGACTTGGAGTAACAAGG..................................................... 21 2 4 0.25 1 1 0 0
...........................................................................................ACTGGACTTGGAGTCAGAAGGAGA.................................................. 24 3 4 0.25 1 1 0 0
...........................................................................................ACTGGACTTGGAGCCAGATGGC.................................................... 22 2 4 0.25 1 1 0 0
......................................................TCCTGACTCCAGGTCCTGTGTAAA....................................................................................... 24 3 4 0.25 1 1 0 0

Anti-sense strand reads

CACTCGACGAACAGGTGCTGGTGAGTCGGTCCCCCACTGTCTCGGTGGGTCCCGAGGACTGAGGTCCAGGACACACAATGGAGCTTTATCGTGACCTGAACCTCAGTCTTCCGGACTCACCTCAGTGGAAGGGGCGAGAGACCGACCCACTAGGACCTCGTTCGG
*************************************..((.((((.((((.((.((((((((((((((...((((((........)))))).)))))))))))))).)).)))).))))..))...**************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
......................................................................................TATCGTGACCTGATCCCCAGTCAT....................................................... 24 3 3 0.33 1 1
....................................................................................TTTATCGTGACCTGATCCCCAGTCGT....................................................... 26 3 3 0.33 1 1

Generated: 04/30/2015 at 05:38 PM