ID:rno-mir-370 |
Coordinate:chr6:133739916-133739994 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -41.9 |
 |
|
AGGAAGGTACTGCTGTTCTCACTCTGCAAATCCTACAAGTCCGGGGCCTAAGACAGAGAGACCAGGTCACGTCTCTGCAGTTACACAGCTCATGAGTGCCTGCTGGGGTGGAACCTGGTTTGTCTGTCTGTCTATCACCATCACTCAGGTGCCGCCGCCGCCGCCACCGCTGCTGCTGC
***********************************************...(((((((.(((((((((..((((((.((((.(((.((.....)).))).)))).))))))..))))))))).))))))).....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTAA.......................................................... | 24 | 2 | 1 | 88.00 | 88 | 84 | 4 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTAT.......................................................... | 24 | 1 | 1 | 73.00 | 73 | 72 | 1 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTAAA......................................................... | 25 | 3 | 1 | 29.00 | 29 | 29 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGT............................................................ | 22 | 0 | 1 | 17.00 | 17 | 17 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTA.......................................................... | 24 | 1 | 1 | 16.00 | 16 | 16 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTAAT......................................................... | 25 | 3 | 1 | 15.00 | 15 | 15 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTA........................................................... | 23 | 1 | 1 | 15.00 | 15 | 15 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTAT......................................................... | 25 | 2 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| ................................................................................................TGCCTGCTGGGGTGGAACCTGGTAG.......................................................... | 25 | 2 | 1 | 9.00 | 9 | 0 | 9 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTT......................................................... | 25 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAA........................................................... | 23 | 2 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTT.......................................................... | 24 | 0 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTT........................................................... | 23 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTATA......................................................... | 25 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTAT........................................................ | 26 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTAAAT........................................................ | 26 | 3 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAAT.......................................................... | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTAAAT...................................................... | 28 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGCAT.......................................................... | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTATT......................................................... | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTTTT....................................................... | 27 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAT........................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTAA......................................................... | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................CAGGTCACGTCTCTGCAGTTACA.............................................................................................. | 23 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAAA.......................................................... | 24 | 3 | 4 | 2.75 | 11 | 11 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTAATT........................................................ | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................AGCCTGCTGGGGTGGAACCTGGTAA.......................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGATAT......................................................... | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTGA.......................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTATTT........................................................ | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTAA........................................................ | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGAT............................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGA............................................................. | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTTTAAA....................................................... | 26 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTAA.......................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTAT.......................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTA......................................................... | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTAAT......................................................... | 24 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...................................................................................................CTGCTGGGGTGGAACCTGGTAA.......................................................... | 22 | 2 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCTGCTGGGCTGGAACCTGGTTA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................CTGCTGGGGTGGAACCTGGTT........................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................CTGCTGGGGTGGAACCTGGTTTAA........................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCGGGGGTGGAACCTGGTT........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGGATT......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGAAACCTGGTATAT........................................................ | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGCGGAACCTGGTAT.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TGCCTGCTGGGGTGGAACCTGGTATAA........................................................ | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................AGCCTGCTGGGGTGGAACCTGGTT........................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGCGGAACCTGGT............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGGAT.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTATA........................................................ | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGGGGAACCTGGAT........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTTT........................................................ | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAATT......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGA............................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGCGGAACCTGGTT........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGGGGAACCTGGTT........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGCGGAACCTGGTTA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAAACTGGTA........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TGCCTGCTGGGGTGGAACCTGGATT.......................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTTTA....................................................... | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGCTGGAACCTGGTAT.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTATAT........................................................ | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGTTGGGGTGGAACCTGGTA........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTTA.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTTGT......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCATGCTGGGGTGGAACCTGGTTAA......................................................... | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGCACCTGGTTTT......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TGCCTGCTGGGGTGGAACCTGGTTAT......................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTG.............................................................. | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TGCCTGCTGGGGTGGAACCTGGTGTT......................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGATGGGGTGGAATCTGGTAT.......................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGATA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTTTAT....................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGAAT........................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGAGGAACCTGGTAT.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGAAACCTGGTAT.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGTTAAT........................................................ | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................TGCCTGCTGGGGTGGAACCTGGTTT.......................................................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................GCTGGGGTGGAACCTGGTTTGT........................................................ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGG............................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAGA.......................................................... | 24 | 3 | 4 | 0.75 | 3 | 3 | 0 | 0 |
| .................................................................................................GCCCGCTGGGGTGGAACCTGGTAA.......................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGCGGAACCTGGTTAT......................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................CCCTGCTGGGGTGGAACCTGGTAA.......................................................... | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGCAA.......................................................... | 24 | 3 | 4 | 0.50 | 2 | 2 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGAA............................................................ | 22 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 |
| .................................................................................................GCCTGCTGGGGGGGAACCTGGTA........................................................... | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGTAA........................................................... | 23 | 3 | 5 | 0.40 | 2 | 2 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGTGGAACCTGGTAAA......................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .................................................................................................ACCTGCTGGGGTGGAACCTGGTAA.......................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .................................................................................................GCTTGCTGGGGTGAAACCTGGTAT.......................................................... | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .................................................................................................TCCTGCTGGGGTGGAACCTGGTAA.......................................................... | 24 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTGGAAG.......................................................... | 24 | 3 | 8 | 0.13 | 1 | 1 | 0 | 0 |
| ..................................................................................................CCTGCTGGGGAGGAACCTGGAAT.......................................................... | 23 | 3 | 10 | 0.10 | 1 | 1 | 0 | 0 |
| .................................................................................................GCCTGCTGGGGTGGAACCTAAA............................................................ | 22 | 3 | 11 | 0.09 | 1 | 1 | 0 | 0 |
|
TCCTTCCATGACGACAAGAGTGAGACGTTTAGGATGTTCAGGCCCCGGATTCTGTCTCTCTGGTCCAGTGCAGAGACGTCAATGTGTCGAGTACTCACGGACGACCCCACCTTGGACCAAACAGACAGACAGATAGTGGTAGTGAGTCCACGGCGGCGGCGGCGGTGGCGACGACGACG
*********************************************...(((((((.(((((((((..((((((.((((.(((.((.....)).))).)))).))))))..))))))))).))))))).....*********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:46 PM