ID:rno-mir-3580 |
Coordinate:chrX:151295615-151295695 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -36.3 |
 |
|
TATTGAAAATGATGGAGGGAGTGTGATGGGACTTCCTCATTAATGTAATAGTGTGCTATGCCCTGCTTGTACTTATTCTGGTGACATGAGGTATCTGTGACTAGGGTAGTATGAGTAGAGTAAAGTTCACCAAATTCTTCATTTGATCAGTCTGGATGATGAGTATGGTGGCTTCTCCTTA
************************************************..(((.(((.(((.(((((((((((.((((((((.(((.((....))))).))))))))))))))))))).))).))).)))....*********************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528817 Adult_testes |
GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|---|---|
| .................................................................................................TGACTAGGGTAGTATGAGTAGA.............................................................. | 22 | 0 | 1 | 681.00 | 681 | 452 | 229 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAA............................................................. | 23 | 1 | 1 | 47.00 | 47 | 39 | 8 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAG............................................................... | 21 | 0 | 1 | 47.00 | 47 | 25 | 22 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGACA............................................................................................... | 23 | 0 | 1 | 35.00 | 35 | 34 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAT............................................................. | 23 | 1 | 1 | 27.00 | 27 | 21 | 6 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAAA............................................................ | 24 | 2 | 1 | 19.00 | 19 | 14 | 5 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGT................................................................. | 19 | 0 | 1 | 18.00 | 18 | 1 | 17 | 0 |
| ................................................................................................ATGACTAGGGTAGTATGAGTAGA.............................................................. | 23 | 1 | 1 | 15.00 | 15 | 3 | 12 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGTAGA.............................................................. | 21 | 0 | 1 | 12.00 | 12 | 9 | 3 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGT.............................................................. | 22 | 1 | 1 | 8.00 | 8 | 5 | 3 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAAT............................................................ | 24 | 1 | 1 | 6.00 | 6 | 2 | 4 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGC.............................................................. | 22 | 1 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .................................................................................................TGACTAGGGGAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 5.00 | 5 | 4 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTTTGAGTAGA.............................................................. | 22 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGAC................................................................................................ | 22 | 0 | 1 | 4.00 | 4 | 3 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGATA............................................................ | 24 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .....................................................................................................TAGGGTAGTATGAGTAGA.............................................................. | 18 | 0 | 1 | 4.00 | 4 | 0 | 4 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTA................................................................ | 20 | 0 | 1 | 3.00 | 3 | 1 | 2 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGATT............................................................ | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................TGACTAGGGCAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTATCG............................................................. | 23 | 2 | 1 | 3.00 | 3 | 0 | 0 | 3 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAAAAA.......................................................... | 26 | 2 | 1 | 3.00 | 3 | 0 | 3 | 0 |
| .................................................................................................TGACTAGGGTGGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 3.00 | 3 | 1 | 2 | 0 |
| .................................................................................................TGACTAGGGTAGTCTGAGTAGA.............................................................. | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTAGGAGTAGA.............................................................. | 22 | 1 | 1 | 2.00 | 2 | 0 | 2 | 0 |
| .................................................................................................TGACTAGGGCAGTATGAGTAGAA............................................................. | 23 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGTAGAAT............................................................ | 23 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGG.............................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................ATGCTTGTACTTATTCTGGTGACA............................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAAAAAT......................................................... | 27 | 3 | 1 | 2.00 | 2 | 0 | 2 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGACATGAGGT......................................................................................... | 29 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................TAGGGTAGTATGAGTAG............................................................... | 17 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAG.................................................................. | 18 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGAAGA.............................................................. | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ....................................................................................................CTAGGGTAGTATGAGTAGA.............................................................. | 19 | 0 | 1 | 2.00 | 2 | 0 | 2 | 0 |
| .................................................................................................TGACTAGGGTTGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ................................................................................................ATGACTAGGGTAGTATGAGTAGAA............................................................. | 24 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGAGA............................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGAAGC.............................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................ATGCTTGTACTTATTCTGGTGA................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ................................................................................................ATGACTAGGGTAGTATGAGTAGT.............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGACAT.............................................................................................. | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTG.................................................................................................. | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGCCTAGGGTAGTCTGAGTAGA.............................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................AGACTAGGGTAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTAAGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGAATAGGGTAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACTTCTTATGGTGACA............................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................ATGACTAGGGTAGTATGAGTAGAAA............................................................ | 25 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGCTT............................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................ATGACTCGGGTAGTATGAGTAGA.............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACCTATTCTGGTGACA............................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTAAGAGTAGAA............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................GACTAGGGTAGTACGAGTAGA.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTACGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTTA............................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGAAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGTAGT.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ......................................................................................................AGGGTAGTATGAGTAGA.............................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..................................................................................................GTCTAGGGTAGTATGAGTAGA.............................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAAG............................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTCGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGCAGTATGAGTAGAT............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................GGACTAGGGTAGTATGAGTAG............................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGATTAGGGTAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................ATGACTAGGGTAGTATGAGTAGAAT............................................................ | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ................................................................GCTTGTACTTATTCTGGTGACATGAG........................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGT................................................................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGACATGAGG.......................................................................................... | 28 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGA................................................................... | 17 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................TGCTTGCACTTATTCTGGTGACA............................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGACAA.............................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................ATGACTAGGGTAGTATGAGTAG............................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTTTGAGTAGAT............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................CTTGGGTAGTATGAGTAGA.............................................................. | 19 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGCGTAGC.............................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGTAGAAA............................................................ | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGGAGTATGAGTAGAT............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TCACTAGGGTAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAATATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGCAGTATGAGTAG............................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGAAA............................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGATTAGGGTAGTAGGAGTAGA.............................................................. | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGTAGAA............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGCA............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGCCTAGGGTAGTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATTAGTAG............................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGCGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGCGTAGAA............................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGTAA............................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGCCTAGGGTAGTATGAGTAGAA............................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAATT........................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTATTATGAGTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGTTT............................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGATTAGA.............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................ATGCTTGTACTTATTCTGGTGAC................................................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................TGCTTGTACTTATTCTGGTGACT............................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..................................................................................................GACTAGGGTAGTATGAGTAGAT............................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGGTT............................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGAAAA........................................................... | 25 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTATATT............................................................ | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..............................................................................................AAATGACTAGGGTAGTATGAGTAG............................................................... | 24 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGA................................................................. | 19 | 1 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| .................................................................................................TGCCTAGGGTAGTATGAGTAGAAA............................................................ | 24 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| .................................................................................................TGACTAGGGTAGTATGAGTAGCT............................................................. | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGTAGTATGGGTAGC.............................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................TGACTAGGGGAGTCTGAGTAGA.............................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................TGAATAGGGTAGTATGCGTAGAA............................................................. | 23 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..................................................................................................GACTAGGGTAGTATATGTAGA.............................................................. | 21 | 2 | 3 | 0.33 | 1 | 0 | 1 | 0 |
| .................................................................................................TGAATAGGGTAGTATGAGTAGT.............................................................. | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
|
ATAACTTTTACTACCTCCCTCACACTACCCTGAAGGAGTAATTACATTATCACACGATACGGGACGAACATGAATAAGACCACTGTACTCCATAGACACTGATCCCATCATACTCATCTCATTTCAAGTGGTTTAAGAAGTAAACTAGTCAGACCTACTACTCATACCACCGAAGAGGAAT
***********************************************..(((.(((.(((.(((((((((((.((((((((.(((.((....))))).))))))))))))))))))).))).))).)))....************************************************ |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:52 PM