ID:rno-mir-3578 |
Coordinate:chr6:133893672-133893788 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
GAAGCACAAAGCTGCCCCCACCCCCACGGGGGCTGCAACTCCGAGAGCTTTCTCCAAGCTGAGCATTGATACTGAGAAAAGATCAACCATGTATTATTCGAAGTCAGCTAAGCGAATATAACACGGTCGATCTCCCTTCAAGTACCAGCAGAGGTGCCGAGCTGAGGTAGTGACATCCTGGCGCAGGCTGCGGCGGGCACCGACGGCTAGTGGACCA
***********************************.....(((.(((((.((((..((((..((((((.(((((((...(((((.(((.(((..((((((............))))))..))).))).)))))...))).)))).))......))))..)))))))).)))....)).))).*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
|
CTTCGTGTTTCGACGGGGGTGGGGGTGCCCCCGACGTTGAGGCTCTCGAAAGAGGTTCGACTCGTAACTATGACTCTTTTCTAGTTGGTACATAATAAGCTTCAGTCGATTCGCTTATATTGTGCCAGCTAGAGGGAAGTTCATGGTCGTCTCCACGGCTCGACTCCATCACTGTAGGACCGCGTCCGACGCCGCCCGTGGCTGCCGATCACCTGGT
***********************************.....(((.(((((.((((..((((..((((((.(((((((...(((((.(((.(((..((((((............))))))..))).))).)))))...))).)))).))......))))..)))))))).)))....)).))).*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| .............................................................................TTTCTAGTTGGTACATAATAA....................................................................................................................... | 21 | 0 | 1 | 215.00 | 215 | 207 | 8 | 0 |
| .............................................................................TTTCTAGTTGGTACATAATAAG...................................................................................................................... | 22 | 0 | 1 | 86.00 | 86 | 86 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCCAGCTAGA.................................................................................... | 22 | 0 | 1 | 70.00 | 70 | 70 | 0 | 0 |
| ................................................................................................................GCTTATATTGTGCCAGCTAGA.................................................................................... | 21 | 0 | 1 | 32.00 | 32 | 32 | 0 | 0 |
| ..............................................................................................................ACGCTTATATTGTGCCAGCTAGA.................................................................................... | 23 | 1 | 1 | 29.00 | 29 | 29 | 0 | 0 |
| ..............................................................................................................TCGCTTATATTGTGCCAGCTAGA.................................................................................... | 23 | 0 | 1 | 25.00 | 25 | 24 | 1 | 0 |
| ............................................................................TTTTCTAGTTGGTACATAATAA....................................................................................................................... | 22 | 0 | 1 | 18.00 | 18 | 18 | 0 | 0 |
| ..............................................................................TTCTAGTTGGTACATAATAA....................................................................................................................... | 20 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ............................................................................ATTTCTAGTTGGTACATAATAAG...................................................................................................................... | 23 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTACATACTAA....................................................................................................................... | 21 | 1 | 1 | 5.00 | 5 | 4 | 1 | 0 |
| .............................................................................TTTCTAGTTGGTACATAATA........................................................................................................................ | 20 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ............................................................................TTTTCTAGTTGGTACATAATAAG...................................................................................................................... | 23 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ..............................................................................TTCTAGTTGGTACATAATAAG...................................................................................................................... | 21 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ...........................................................................TTTTTCTAGTTGGTACATAATAA....................................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..............................................................................................................ACGCTTATATTGTGCCAGCTAGAAA.................................................................................. | 25 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...............................................................................................................TGCTTATATTGTGCCAGCTAGA.................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTACATAA.......................................................................................................................... | 18 | 0 | 1 | 3.00 | 3 | 2 | 0 | 1 |
| ..............................................................................................................TCGCTTATATTGTGCCAGCTAGAA................................................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCCAGCTAGAAAA................................................................................. | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .............................................................................................................TTCGCTTATATTGTGCCAGCTAGA.................................................................................... | 24 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................TATTTCTAGTTGGTACATAATAA....................................................................................................................... | 23 | 2 | 2 | 2.50 | 5 | 5 | 0 | 0 |
| .........................................................................................................TCGATTCGCTTATATTGTGCCAGCTAGA.................................................................................... | 28 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCCAGCT....................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCCAGCTAGAA................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................TTTTTTCTAGTTGGTACATAATA........................................................................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................................ATTTCTAGTTGGTACATAATAA....................................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................................................CGATTCGCTTATATTGTGCCAGCTAGA.................................................................................... | 27 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................ATCTAGTTGGTACATAATAAG...................................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................CTAGTTGGTACATAATAAG...................................................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................AATTTCTAGTTGGTACATAATAA....................................................................................................................... | 23 | 2 | 3 | 1.67 | 5 | 5 | 0 | 0 |
| .............................................................................GTTCTAGTTGGTACATAATAA....................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AGGCTTATATTGTGCCAGCTAGA.................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGCGCCAGCTAGA.................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................CGCTTATATTCTGCCAGCTAGA.................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................AGCTTATATTGTGCCAGCTAGA.................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................CTAGTTGGTACATAATAA....................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................ATGCTTATATTGTGCCAGCTAGA.................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTACATAATAAATGT................................................................................................................... | 25 | 3 | 3 | 1.00 | 3 | 0 | 3 | 0 |
| .................................................................................................................CTTATATTGTGCCAGCTAGA.................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTTTCTAGTTGGTACATAATGA....................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................ATAGTTGGTACATAATAAG...................................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTTTCTAGTTGGTACATAATA........................................................................................................................ | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................GCTTATATTGTGCCAGCTAGAAAA................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTACCTAATAA....................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCCAGCTAG..................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTACATCATAAG...................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................AGCTTATATTGTGCCAGCTAGT.................................................................................... | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TCTCTAGTTGGTACATAATAA....................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTCGTTGGTACATAATAAG...................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................ATTCTAGTTGGTACATAATAA....................................................................................................................... | 21 | 1 | 3 | 1.00 | 3 | 3 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCAAGCTAGA.................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTTTCTAGTTGGAACATAATAA....................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................TCTTTTCTAGTTGGTACATAATA........................................................................................................................ | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTAAATAATAAG...................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................GTTTCTAGTTGGTACATAATAAG...................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................CTTCTAGTTGGTACATAATAA....................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................TTCTAGTTGGTACATGATAA....................................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................ATTTTCTAGTTGGTACATAATA........................................................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TTCGCTTATCTTGTGCCAGCTAGA.................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................TCTAGTTGGTACATAATAA....................................................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................GATTCGCTTATATTGTGCCAGCTAGA.................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................CGCTTATATTGTGCCAGCTTGAA................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................GCTTATATTGTGCCAGCTAG..................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................ATCGCTTATATTGTGCCAGCTAGA.................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................TTCTAGATGGTACATAATAAG...................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTACATCATA........................................................................................................................ | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................ATTTCTAGTTGGTAAATAATAAG...................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGCTACATAATAA....................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................AGCTTATATTGTGCCAGCTAGAGGCAC............................................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AAGCTTATATTGTGCCAGCTAGA.................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGTCCATAATAA....................................................................................................................... | 21 | 1 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| ...........................................................................TTATTCTAGTTGGTACATAATAA....................................................................................................................... | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ................................................................................CTAGTTGGTACATAATAAA...................................................................................................................... | 19 | 1 | 4 | 0.50 | 2 | 2 | 0 | 0 |
| ............................................................................ATTTCTAGTTGATACATAATCAG...................................................................................................................... | 23 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAATTGGTACATAATAA....................................................................................................................... | 21 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ........................................................................TTTTTTTTCTAGTTGGTACATAATAA....................................................................................................................... | 26 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAATTGGTACATAATAAG...................................................................................................................... | 22 | 1 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| .............................................................................TTTCTAGTTGGAACATAATAAG...................................................................................................................... | 22 | 1 | 6 | 0.17 | 1 | 1 | 0 | 0 |
Generated: 04/30/2015 at 05:48 PM