ID:rno-mir-3575 |
Coordinate:chr4:157236759-157236873 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
GGAGGAGTGGGTTTGCTACCAGAGAAAGGGCCTAAAGCAAGGGACCGCCATGGACGCCGATGACACAGGGGCAGGGGCCTCCATCATTACCCGGCAGTATTAGAGACTCCCAACCAGCACCCAAACACTGCTGGGTAAGACGAGGGCCCCTACCCAACCAGTCCACCTTCAGGATCAGCCCTGGTAAAGCCCAAGCCCTGAGGAGAAGCGGCAGA
***********************************.......((((....(((((.............(((.((((((((...((.((((((((((((............................))))))))))))))...)))))))).))).....)))))......)).))....*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
|
CCTCCTCACCCAAACGATGGTCTCTTTCCCGGATTTCGTTCCCTGGCGGTACCTGCGGCTACTGTGTCCCCGTCCCCGGAGGTAGTAATGGGCCGTCATAATCTCTGAGGGTTGGTCGTGGGTTTGTGACGACCCATTCTGCTCCCGGGGATGGGTTGGTCAGGTGGAAGTCCTAGTCGGGACCATTTCGGGTTCGGGACTCCTCTTCGCCGTCT
***********************************.......((((....(((((.............(((.((((((((...((.((((((((((((............................))))))))))))))...)))))))).))).....)))))......)).))....*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ...............................................................................AGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 23 | 0 | 1 | 84.00 | 84 | 75 | 8 | 1 |
| ..............................................................................AAGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 24 | 1 | 1 | 17.00 | 17 | 16 | 0 | 1 |
| ..............................................................................TAGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 24 | 1 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| ................................................................................GGTAGTAATGGGCCGTCATAAT................................................................................................................. | 22 | 0 | 1 | 11.00 | 11 | 5 | 6 | 0 |
| ...............................................................................TGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 23 | 1 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| .............................................................................TAAGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 25 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ...............................................................................AGGTAGTAATGGGCCGTCATA................................................................................................................... | 21 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ...............................................................................AGGTAGTAATGGGCCGTCATAA.................................................................................................................. | 22 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................................AAAGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 25 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................TAGGTAGTAATGGGCCGTCATAATC................................................................................................................ | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................AAGGTAGTAATGGGCCGTCATA................................................................................................................... | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................ATGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...............................................................................AGGTAGTACTGGGCCGTCATAAT................................................................................................................. | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................TTAGGTAGTAATGGGCCGTCATAATC................................................................................................................ | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................GGTAGTAATGGGCCGTCATAATCGGC............................................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................TAGGTCGTAATGGGCCGTCATAAT................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................TGGTAGTAATGGGCCGTCACAATA................................................................................................................ | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TTAGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GGTAGTAATGGGCCGTCAAAAC................................................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................................AGGTCGTAATGGGCCGTCATAAT................................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...............................................................................AGCTAGTAATGGGCCGTCATAATA................................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TATGGTAGTAATGGGCCGTCATAAT................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AATGTAGTAATGGGCCGTCATAAT................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................TTGGTCGTAATGGGCCGTCATAAT................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................AGTAATGGGCCGTCATAAT................................................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................AGGTAGTAATGGGCCGTCATAATCA............................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................ATGTAGTAATGGGCCGTCATAAT................................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................TGGTAGTAATGGGCCGTCA..................................................................................................................... | 19 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ..............................................................................AAGGTAGTAAAGGGCCGTCATAAT................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GGTAGTAATGGGCAGTCATAAT................................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ...............................................................................AGGTAGTAATGGGCCGTCAT.................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GGTAGTAATGGGCCGTCATAA.................................................................................................................. | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................AGGTAGTAATGGGCCGTCATAATC................................................................................................................ | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................AAGGTAGTAACGGGCCGTCATAAT................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................AGGTAGTAATGGACCGTCATAAT................................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................GGTAGTCATGGGCCGTCATCAT................................................................................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..................................................................................ATGTAATGGGCCGTCATAAT................................................................................................................. | 20 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................GTAGTAATGGGCCGTCATAATAAG.............................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...............................................................................AGGTAGTAATGGGTCGTCA..................................................................................................................... | 19 | 1 | 5 | 0.20 | 1 | 0 | 0 | 1 |
Generated: 04/30/2015 at 05:44 PM