ID:

rno-mir-3561

Coordinate:

chr7:26427720-26427828 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-51.2 -51.2 -51.1

Sense Strand Reads

GTGTCAACCCAGGGCAGACACTCAGAACCTGTGACAGTGTGTGTCAACCCAGGGCAGACACTCAGAACCTGAGACTGTGTCAATCCAGGGTAGACACTCAGAACCTGAGACTGTGTCTATCCAGGGTAGACACTCAGAACCTGAGGCAGCATATGTCCTAAGTACACAGTGGTGTCTCACAAGCCAGTGAAAACAGATAGAAGCCAAAT
***********************************....(((((..((..((((((....(((((...((((....(((((.((((.((((((((((((((...))))....)))))))))).)))).)))))))))...)))))........))))))..)))))))......***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
...........................................................ACTCAGAACCTGAGACTGTGTCAATC............................................................................................................................ 26 0 1 1.00 1 1
..............................GTGACAGTGTGTGTCAACCCAGGGC.......................................................................................................................................................... 25 0 3 0.33 1 1
.....................TCAGAACCTGTGACAGTGTGTGTCAACC................................................................................................................................................................ 28 0 4 0.25 1 1

Anti-sense strand reads

CACAGTTGGGTCCCGTCTGTGAGTCTTGGACACTGTCACACACAGTTGGGTCCCGTCTGTGAGTCTTGGACTCTGACACAGTTAGGTCCCATCTGTGAGTCTTGGACTCTGACACAGATAGGTCCCATCTGTGAGTCTTGGACTCCGTCGTATACAGGATTCATGTGTCACCACAGAGTGTTCGGTCACTTTTGTCTATCTTCGGTTTA
***********************************....(((((..((..((((((....(((((...((((....(((((.((((.((((((((((((((...))))....)))))))))).)))).)))))))))...)))))........))))))..)))))))......***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
...................................................................................................................................................................................GTTCGGTCACTTTTGTCTATCTTCGGTT.. 28 0 1 2.00 2 2
...................................................................................................................................................................................GTTCTGTCACTTTTGTCTATCTTCGGTT.. 28 1 1 1.00 1 1
...........................................AGTTGGGTCCCGTCTGTGAGTCTTGGAC.......................................................................................................................................... 28 0 7 0.14 1 1
...AGTTGGGTCCCGTCTGTGAGTCTTGGAC.................................................................................................................................................................................. 28 0 7 0.14 1 1

Generated: 04/30/2015 at 05:49 PM