ID:rno-mir-3553 |
Coordinate:chr4:57463572-57463677 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
TGGAAACAGCGAGGTCCAGGCAGAAGGAGTGAGGAGCTCCGAAGCACTCGCGGATCTGTCTCTGCTCTGTTTATGGCCCTTCGGTAATTCACTGACCGAGACTGTTCACAGTGAATTCTACCAGTGCCATACACAGGACAGGAGTCACACTCTCTGGCCTGCAGACCCTACAGAGAGGTCAGCTGCCCTCTCCTGGAGGCCTCCGA
***********************************(((....)))....(((((......)))))((((..((((((.((..((((((((((((...(((....))).))))))))..)))))).))))))..((((.(((((((...)))).))).))))))))......*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
|
ACCTTTGTCGCTCCAGGTCCGTCTTCCTCACTCCTCGAGGCTTCGTGAGCGCCTAGACAGAGACGAGACAAATACCGGGAAGCCATTAAGTGACTGGCTCTGACAAGTGTCACTTAAGATGGTCACGGTATGTGTCCTGTCCTCAGTGTGAGAGACCGGACGTCTGGGATGTCTCTCCAGTCGACGGGAGAGGACCTCCGGAGGCT
***********************************(((....)))....(((((......)))))((((..((((((.((..((((((((((((...(((....))).))))))))..)))))).))))))..((((.(((((((...)))).))).))))))))......*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ............................................................................................................GTCACTTAAGATGGTCACGGTAT........................................................................... | 23 | 0 | 1 | 14.00 | 14 | 9 | 5 | 0 |
| ...........................................................................................................AGTCACTTAAGATGGTCACGGTAT........................................................................... | 24 | 1 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| .............................................................................................................TCACTTAAGATGGTCACGGTAT........................................................................... | 22 | 0 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ...........................................................................................................TGTCACTTAAGATGGTCACGGTAT........................................................................... | 24 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ...........................................................................................................AGTCACTTAAGATGGTCACGGTA............................................................................ | 23 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ...........................................................................................................TGTCACTTAAGATGGTCACGGTA............................................................................ | 23 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...........................................................................................................TGTCACTTAAGATGGTCACGGTATAA......................................................................... | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................TCACTTAAGATGGTCACGGTATA.......................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................AAGTCACTTAAGATGGTCACGGTAT........................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TGTCACTTAAGCTGGTCACGGTATAA......................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................AATGTCACTTAAGATGGTCACGGTA............................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................TAGTCACTTAAGATGGTCACGGTA............................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................TAAATACCGGGAAGCCATTAAGT................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................AAGTCACTTAAGATGGTCACGGTA............................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................................................AACGTCACTTAAGCTGGTCACGGTA............................................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACTTAAGATGGTCACGGTA............................................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .............................................................................................................TCACTTAAGAAGGTCACGGTAT........................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................................TCACTTAAGATAGTCACGGTAT........................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................GCACTTAAGAAGGTCACGGTAA........................................................................... | 22 | 3 | 14 | 0.14 | 2 | 1 | 1 | 0 |
Generated: 04/30/2015 at 05:44 PM