ID:rno-mir-3549 |
Coordinate:chr10:67065885-67065996 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
CACGAGGACCAAGAAAGGGTGGGCTTGGGGGGGGGGGCGAGGAGCGTGGAGAAAATGCCGGTCCTGGGAGCCGAGGACTGGGACTTTGTAGGCCAGTTGAACTGACACCCTCATCTTGCCCGCAAAGACCCAGCTCTCAGCTCCCGTCCGCCTTGGAGTTCGGGATGCCGTGCGCCCCCCGACGGGCTGCCCGGGGCATGAGTCCAGCCGCC
***********************************((((....((((...((.....(((((..(((((((.((((.(((((.((((((.(((.((.(((..........))).)).))).)))))).))))).)))).)))))))...)))..))...))...))))....)).))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
|
GTGCTCCTGGTTCTTTCCCACCCGAACCCCCCCCCCCGCTCCTCGCACCTCTTTTACGGCCAGGACCCTCGGCTCCTGACCCTGAAACATCCGGTCAACTTGACTGTGGGAGTAGAACGGGCGTTTCTGGGTCGAGAGTCGAGGGCAGGCGGAACCTCAAGCCCTACGGCACGCGGGGGGCTGCCCGACGGGCCCCGTACTCAGGTCGGCGG
***********************************((((....((((...((.....(((((..(((((((.((((.(((((.((((((.(((.((.(((..........))).)).))).)))))).))))).)))).)))))))...)))..))...))...))))....)).))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ...........................................................................ATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 1 | 1 | 153.00 | 153 | 124 | 29 | 0 |
| ..........................................................................AATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 148.00 | 148 | 130 | 17 | 1 |
| ..........................................................................TATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 82.00 | 82 | 80 | 2 | 0 |
| .........................................................................AGATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 45.00 | 45 | 44 | 0 | 1 |
| ..........................................................................GATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 34.00 | 34 | 19 | 15 | 0 |
| ...........................................................................TTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 1 | 1 | 27.00 | 27 | 27 | 0 | 0 |
| .........................................................................TAATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 2 | 1 | 27.00 | 27 | 27 | 0 | 0 |
| .........................................................................AAATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 2 | 21.50 | 43 | 37 | 6 | 0 |
| ............................................................................TGACCCTGAAACATCCGGTCAA.................................................................................................................. | 22 | 0 | 1 | 20.00 | 20 | 20 | 0 | 0 |
| .........................................................................TGATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 2 | 1 | 18.00 | 18 | 18 | 0 | 0 |
| ...........................................................................AAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 15.00 | 15 | 14 | 1 | 0 |
| .........................................................................TAGTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 2 | 1 | 15.00 | 15 | 0 | 15 | 0 |
| .............................................................................GACCCTGAAACATCCGGTCAA.................................................................................................................. | 21 | 0 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ..............................................................................................................AGTAGAACGGGCGTTTCTGGGT................................................................................ | 22 | 0 | 1 | 12.00 | 12 | 8 | 2 | 2 |
| .........................................................................TTATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 2 | 1 | 11.00 | 11 | 10 | 0 | 1 |
| ..............................................................................ACCCTGAAACATCCGGTCAA.................................................................................................................. | 20 | 0 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ............................................................................AGACCCTGAAACATCCGGTCAA.................................................................................................................. | 22 | 1 | 1 | 9.00 | 9 | 7 | 0 | 2 |
| ..........................................................................ATTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ..........................................................................AGTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ...........................................................................TAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .........................................................................AGTTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ..........................................................................TTTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 7.00 | 7 | 5 | 0 | 2 |
| ..........................................................................TATAACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .........................................................................TTTTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ..........................................................................GATGACCCTGAAACATCCGGTCAAA................................................................................................................. | 25 | 3 | 1 | 4.00 | 4 | 0 | 4 | 0 |
| ...........................................................................ATGACCCTGCAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 4.00 | 4 | 2 | 2 | 0 |
| .............................................................................................................AAGTAGAACGGGCGTTTCTGGGT................................................................................ | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .........................................................................AATTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..........................................................................TAAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 3 | 3.67 | 11 | 10 | 1 | 0 |
| .........................................................................GAATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................................ATATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................ATGACCCTGAAACATCCGGTCA................................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................ATGACCCTGGAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................AATGACCCTGCAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 1 | 3.00 | 3 | 2 | 1 | 0 |
| ..........................................................................AACGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................................TGACCCTGAAACATCCGGTCA................................................................................................................... | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................................AAGTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................TTGACCCTGAAACATCCGGTCA................................................................................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................AAAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 7 | 2.57 | 18 | 16 | 1 | 1 |
| ................................................................................CCTGAAACATCCGGTCAA.................................................................................................................. | 18 | 0 | 1 | 2.00 | 2 | 0 | 0 | 2 |
| .........................................................................CTATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................TATTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ...........................................................................GTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................TATGACCCTGAAACATCCGGTCA................................................................................................................... | 23 | 2 | 2 | 2.00 | 4 | 4 | 0 | 0 |
| ..........................................................................TATGACCCTGAAACATCCGGTCAAA................................................................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................ATGACCCTGAACCATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 1 | 1 | 0 |
| ...............................................................................CCCTGAAACATCCGGTCAA.................................................................................................................. | 19 | 0 | 1 | 2.00 | 2 | 0 | 0 | 2 |
| ...........................................................................ATGACCCTGAAACATCCGGTCAAA................................................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................TAATGACCCTGAACCATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................TTAACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................TTATAACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...........................................................................ATGACCCTGAAACATCCGGTC.................................................................................................................... | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TGTAGAACGGGCGTTTCTGGGT................................................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................GGTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................CATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................AATGACCCTGAAACATCCGGTCAAA................................................................................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................TCATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..........................................................................TTAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 3 | 1.33 | 4 | 4 | 0 | 0 |
| ...........................................................................CTGAACCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................................TTATGACCCTAAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................TTATGACCCTGCAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GGATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................ACCCGGAAACATCCGGTCAA.................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................ATGACCCTGAAAAATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................GATGACCCTGCAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...........................................................................ACGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................ATGACCCTGTAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AGTAGAACGGACGTTTCTGGGT................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................CTGAAACATCCGGTCAA.................................................................................................................. | 17 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ..........................................................................TATGACCCTGAACCATCCGGTCAA.................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................TTGATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................AAGACCCTGCAACATCCGGTCAA.................................................................................................................. | 23 | 3 | 2 | 1.00 | 2 | 1 | 1 | 0 |
| ...........................................................................ATGACCATGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..........................................................................TCTGACCCTGAACCATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ..........................................................................CATGACCCTGCAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................AGACCCTGAAACATCCGGTCA................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................TAATGACCCGGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................ATGACCCGGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TACCCTGAAACATCCGGTCAA.................................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................CAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................AGAACGGGCGTTTCTGGGT................................................................................ | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .........................................................................TAATGACCCTGAAACATCCGGTCA................................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................AAGTAGAACGGGCGTTTCGGGGT................................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................TAATGACCCTGCAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................TGTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..........................................................................AATGACCCTGAAACATCCGGGCAA.................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................TAGTAGAACGGGCGTTTCTGGGT................................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................TTTATGACCCTGAAACATCCGGTCAA.................................................................................................................. | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................GAACCCTGAAACATCCGGTCAA.................................................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................AATGACCCTGTAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..........................................................................AATGACCCTGAAACATCCGGACAA.................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................TTTAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..........................................................................CAAGACCCTGCAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AGTAGCACGGGCGTTTCTGGGT................................................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...........................................................................ATAACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................ATTTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................ATTTTGACCCTGAAACATCCGGTCAA.................................................................................................................. | 26 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ............................................................................TAACCCTGAAACATCCGGTCAA.................................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ............................................................................TTACCCTGCAACATCCGGTCAA.................................................................................................................. | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................AATGACCCTGAAACATCCGGTGAA.................................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................ATGACCCTGACACATCCGGTCAA.................................................................................................................. | 23 | 2 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ..........................................................................CATCGCCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................GATGACCCTGAAAAATCCGGTCAA.................................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ...........................................................................ATGACCCTGCAACATCCGGTTAA.................................................................................................................. | 23 | 3 | 2 | 0.50 | 1 | 0 | 1 | 0 |
| ..........................................................................AGTGACCCTGTAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................GATCACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................ATCACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ...........................................................................GAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 |
| ..........................................................................CATGACCCTGCAACATCCGGTAAA.................................................................................................................. | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................AATGACCCTGAAACCTCCGGTCAA.................................................................................................................. | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..........................................................................AATGACCCTGAAAAATCCGGTCAA.................................................................................................................. | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................................AGACCCGGAAACATCCGGTCAA.................................................................................................................. | 22 | 2 | 3 | 0.33 | 1 | 0 | 1 | 0 |
| ...........................................................................TTGACCCTGAAACCTCCGGTCAA.................................................................................................................. | 23 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ...........................................................................ATGACCCTCAACCATCCGGTCAA.................................................................................................................. | 23 | 3 | 6 | 0.33 | 2 | 2 | 0 | 0 |
| ...........................................................................AGAACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 3 | 11 | 0.27 | 3 | 3 | 0 | 0 |
| ..........................................................................GAGGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .........................................................................TAAGGACCCTGAAACATCCGGTCAA.................................................................................................................. | 25 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ...........................................................................TGGACCCGGAAACATCCGGTCAA.................................................................................................................. | 23 | 3 | 4 | 0.25 | 1 | 0 | 1 | 0 |
| ...........................................................................ATTACCCTGAACCATCCGGTCAA.................................................................................................................. | 23 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..........................................................................TATGACCCTGAAACATACGGTCAA.................................................................................................................. | 24 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .........................................................................AATTGACCCTGAAACATCCGGTC.................................................................................................................... | 23 | 3 | 13 | 0.23 | 3 | 3 | 0 | 0 |
| ..........................................................................AATGACCCTGAAACATCTGGTCAA.................................................................................................................. | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ..........................................................................ATAGACCCTGAAACATCCGGTCAA.................................................................................................................. | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ...........................................................................AATACCCTGAAACATCCGGTCAA.................................................................................................................. | 23 | 3 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| ...........................................................................AAGACCCTGAAACATACGGTCAA.................................................................................................................. | 23 | 3 | 11 | 0.09 | 1 | 1 | 0 | 0 |
Generated: 04/30/2015 at 05:32 PM