ID:rno-mir-3548 |
Coordinate:chr5:173489353-173489472 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
TGGCCTATCTGGAGTCCAGGAGCTAAGACAAGTGTGTATCATCAGCCTGTCTTCGGCGAGTGTTGGGTCACCTTTGAACATCGTTACCAGACAGTGTTAGAGTCAAGCCAAGAAATCCAGCACTGTCCGGTAAGATGCCCACAGAGGCCCAGGTATGCTTTGGTAGGAAGACACAGAGCAGGATATGTGGTTTCCACCCTCAGGGGGGCCCAGTGGAGAC
***********************************.((.........(((((((.((((((((((((...((((((..((((.(((((.(((((((((.((.((.......))..)).))))))))).)))))))))....))))))))))...))))))..))..)))))))..........))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528818 Adult_testes_Mili_IP |
|---|---|---|---|---|---|---|
| ....................................................................................TACCAGACAGTGTTAGAGTCG................................................................................................................... | 21 | 1 | 1 | 5.00 | 5 | 5 |
| ................................................................GGGTCACCTTTGAAGATCG......................................................................................................................................... | 19 | 1 | 2 | 4.00 | 8 | 8 |
| ....................................................................................TACCAGACAGTGTAAGAGTCG................................................................................................................... | 21 | 2 | 1 | 1.00 | 1 | 1 |
| ................................................................GGGCCACCTTTGAAGATCG......................................................................................................................................... | 19 | 2 | 7 | 0.14 | 1 | 1 |
|
ACCGGATAGACCTCAGGTCCTCGATTCTGTTCACACATAGTAGTCGGACAGAAGCCGCTCACAACCCAGTGGAAACTTGTAGCAATGGTCTGTCACAATCTCAGTTCGGTTCTTTAGGTCGTGACAGGCCATTCTACGGGTGTCTCCGGGTCCATACGAAACCATCCTTCTGTGTCTCGTCCTATACACCAAAGGTGGGAGTCCCCCCGGGTCACCTCTG
***********************************.((.........(((((((.((((((((((((...((((((..((((.(((((.(((((((((.((.((.......))..)).))))))))).)))))))))....))))))))))...))))))..))..)))))))..........))*********************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ............................................................................TTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 23 | 0 | 1 | 150.00 | 150 | 134 | 16 | 0 |
| ...........................................................................TTTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 24 | 1 | 1 | 50.00 | 50 | 49 | 1 | 0 |
| ...........................................................................ATTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 24 | 1 | 1 | 33.00 | 33 | 28 | 5 | 0 |
| .............................................................................TGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 22 | 0 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ..........................................................................TATTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 25 | 2 | 1 | 9.00 | 9 | 8 | 1 | 0 |
| ............................................................................TTGTAGCAATGGTCTGTCACAATA........................................................................................................................ | 24 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ...........................................................................TTTGTAGCAATGGTCTGTCACAA.......................................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ..........................................................................AATTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 25 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...........................................................................ATTGTAGCAATGGTCTGTCACAA.......................................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................................TTGTAGCAATGGTCTGTCACAA.......................................................................................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ...........................................................................AATGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..........................................................................TTTTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................................TTGTAGCACTGGTCTGTCACAAT......................................................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................................TAGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................AGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................CTTGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................TTTGTCGCAATGGTCTGTCACAAT......................................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTGTAGCAATGGTATGTCACAATA........................................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................GTAGCAATGGTCTGTCAAAAT......................................................................................................................... | 21 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ...........................................................................ATTGTCGCAATGGTCTGTCACAAT......................................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................TAGCAATGGTCTGTCACAAT......................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................ATTGTAGCAATGGTCTGTCA............................................................................................................................. | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ............................................................................TTGTAGCAATGGTCTTTCACAAT......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................ATCGTAGCAATGATCTGTCACAAT......................................................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................TGTAGCAATGGTCTGTCACAATA........................................................................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTGTAGCAATGGTCCGTCACAAC......................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................TTGTAGCAATGGTCTGTCACAAC......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................ATGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTGTAGCAACGGTCTGTCACAAT......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTGTAGCAATCGTCTGTCACAAT......................................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................................TAGTAGCAAAGGTCTGTCACAAT......................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................TTGTAGCAATGGTCGGTCACAATA........................................................................................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................CAATATTGTAGCAATGGTCTGTCA............................................................................................................................. | 24 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................AAGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................TTTGTAGCAATGGTGTGTCACAATA........................................................................................................................ | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................ATCGGTAGCAATGGTCTGTCACAAT......................................................................................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
Generated: 04/30/2015 at 05:46 PM