ID:

rno-mir-3547

 Coordinate:

chr10:14603134-14603243 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-55.5 -55.5 -55.0 -55.0

Sense Strand Reads

AGGCCCTGGATGAAGACCTTCTGCGGGAGGCCCACACTGTGACAGCACACCTGACTTCCAAGGTGGGAAGAGGGGTGGGGCCCGGGACTGTACCCATGTGAGGACTATTCTTGAGTCCCGCTCTTGTTCTGAGCACCACCCCTCTCTCAGATGGTGGCAGACATCCGGAAGTACGTACAGCACATCAGTCTGTCTCCGGACTCCATTCAG
***********************************..(((..........(((.((.(((...((((.((((((((((.((.((((((.........(((.(((((.......))))))))....)))))).)).))))))))))))))..))).)))))............)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
.................................................................................................................................TGAGCACCACCCCTCTCTCAGT........................................................... 22 1 1 7.00 7 7 0
..............................................................GTGGGAAGAGGGGTGGGGCCCGGGAAAA........................................................................................................................ 28 3 1 1.00 1 1 0
.................................................................................................................................TGAGCACCACCCCTCTCTCAGA........................................................... 22 0 1 1.00 1 0 1
.................................................................................................................................TGAGCACCACCCCTCTCTCAGAAT......................................................... 24 2 1 1.00 1 1 0
.................................................................................................................................TGAGCACCACCCCTCTCTCAGTAT......................................................... 24 3 4 0.50 2 2 0
.................................................................................................................................TGAGCACCACCCCTCTCTCAGTAA......................................................... 24 3 5 0.20 1 1 0

Anti-sense strand reads

TCCGGGACCTACTTCTGGAAGACGCCCTCCGGGTGTGACACTGTCGTGTGGACTGAAGGTTCCACCCTTCTCCCCACCCCGGGCCCTGACATGGGTACACTCCTGATAAGAACTCAGGGCGAGAACAAGACTCGTGGTGGGGAGAGAGTCTACCACCGTCTGTAGGCCTTCATGCATGTCGTGTAGTCAGACAGAGGCCTGAGGTAAGTC
***********************************..(((..........(((.((.(((...((((.((((((((((.((.((((((.........(((.(((((.......))))))))....)))))).)).))))))))))))))..))).)))))............)))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:32 PM