ID:

rno-mir-3541

 Coordinate:

chr2:188487004-188487107 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-42.8 -42.6 -42.0

Sense Strand Reads

TTGTCTCCACTCGCCATTACCGAGCCCCAGAAGTCATCCTGGGTAAGGGAGCTCAGGACTGCCCAGTGTGCAGTGGTGTGAGGAGGGGGCGTATCCTAGGCATCACACTACCTCTCCCTCCCCCTCACTGCACAGAGTTGGGCTGGTCACAGCCGTGCGACGTGTGGAGCATAGGCTGTATCATCTTCGAGTACTACGTCGGCT
****************************************************....((((((((((((((((((((.....((((((((.......(((........)))...))))))))...))))))))))...)))))).))))...***************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
..................................................................................................................TCCCTCCCCCTCACTGCACAGTAT.................................................................. 24 2 1 2.00 2 2
....................................................................TGCAGTGGTGTGAGGAGGGGGCGAT............................................................................................................... 25 2 1 2.00 2 2
..................................................................................................................TCCCTCCCCCTCACTGCACAGT.................................................................... 22 1 2 1.00 2 2
....................................................................TGCAGTGGTGTGAGGAGGGGGCGTTT.............................................................................................................. 26 1 1 1.00 1 1
..................................................................................................................TCCCTCCCCCTCACTGCACAGA.................................................................... 22 0 1 1.00 1 1
...................................................................GTGCAGTGGAGTGAGGAGGGGGCGT................................................................................................................ 25 1 1 1.00 1 1
...........................................................................................TATCCTAGGCATCACACTACCTC.......................................................................................... 23 0 1 1.00 1 1
...................................................................GTGCAGTGGTGTGAGGAGGGGGCGT................................................................................................................ 25 0 1 1.00 1 1
..................................................................................................................TCCCTCCCCCTCACTGCACAGTAA.................................................................. 24 3 3 0.33 1 1

Anti-sense strand reads

AACAGAGGTGAGCGGTAATGGCTCGGGGTCTTCAGTAGGACCCATTCCCTCGAGTCCTGACGGGTCACACGTCACCACACTCCTCCCCCGCATAGGATCCGTAGTGTGATGGAGAGGGAGGGGGAGTGACGTGTCTCAACCCGACCAGTGTCGGCACGCTGCACACCTCGTATCCGACATAGTAGAAGCTCATGATGCAGCCGA
*****************************************************....((((((((((((((((((((.....((((((((.......(((........)))...))))))))...))))))))))...)))))).))))...**************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:42 PM