ID:

rno-mir-350-2

 Coordinate:

chr13:94849816-94849914 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature
  1. chr13:43827552-43827575 +
  2. chr13:94849831-94849854 -
star
  1. chr13:43827515-43827535 +
  2. chr13:94849871-94849891 -

Sense Strand Reads

ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGCCTTGCTCCTACAAGAGTAAAGTGCACGTGCTTTGGGACAGTGAGGAAAATAATGTTCACAAAGCCCATACACTTTCACCCTTTAGGAGAGTTGCAGCTTCCTTTACACCTGCTTCTTACAAAGTACAGCCAGGCTAATCAGAG
**********************************************************..((((((.(((.((((((((.....(((((((((((.............))))).)))))).....)))))).)).))))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
..............................................................................................................TTCACAAAGCCCATACACTTTCAC................................................................. 24 0 2 845.50 1691 1637 22 32
..............................................................................................................TTCACAAAGCCCATACACTTTCA.................................................................. 23 0 2 510.50 1021 979 38 4
..............................................................................................................TTCACAAAGCCCATACACTTTCACT................................................................ 25 1 2 202.00 404 390 6 8
..............................................................................................................TTCACAAAGCCCATACACTTTC................................................................... 22 0 2 101.00 202 154 47 1
..............................................................................................................TTCACAAAGCCCATACACTTT.................................................................... 21 0 2 35.00 70 41 29 0
...............................................................................................................TCACAAAGCCCATACACTTTCAC................................................................. 23 0 2 27.00 54 52 2 0
..............................................................................................................TTCACAAAGCCCATACACTTTCACA................................................................ 25 1 2 15.50 31 31 0 0
...............................................................................................................TCACAAAGCCCATACACTTTCA.................................................................. 22 0 2 14.00 28 27 1 0
..............................................................................................................TTCACAAAGCCCATACACTTTCT.................................................................. 23 1 2 13.00 26 21 4 1
..............................................................................................................TTCACAAAGCCCATACACTTTCAA................................................................. 24 1 2 11.00 22 17 5 0
..............................................................................................................TTCACAAAGCCCATCCACTTTCAC................................................................. 24 1 2 11.00 22 20 0 2
.............................................................................................................ATTCACAAAGCCCATACACTTTCAC................................................................. 25 1 2 9.50 19 19 0 0
...............................................................................................................TCACAAAGCCCATACACTTTCACT................................................................ 24 1 2 9.00 18 18 0 0
..............................................................................................................TTCACAAAGCCCATACACTT..................................................................... 20 0 2 8.50 17 13 4 0
.............................................................................................................ATTCACAAAGCCCATACACTTTCA.................................................................. 24 1 2 8.50 17 17 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTAAC................................................................. 24 1 2 7.50 15 15 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTAA.................................................................. 23 1 2 6.50 13 13 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTTAC................................................................. 24 1 2 5.50 11 10 0 1
..............................................................................................................TTCACAAAGCCCATACACTTTCAT................................................................. 24 1 2 5.00 10 9 1 0
..............................................................................................................TTCACAAAGCCCACACACTTTCAC................................................................. 24 1 2 5.00 10 10 0 0
..............................................................................................................TTCACAAAGCCCATACCCTTTCAC................................................................. 24 1 2 4.00 8 8 0 0
..............................................................................................................TTCACAAAGCACATACACTTTCAC................................................................. 24 1 2 3.50 7 5 1 1
..............................................................................................................TTCACAAAGCCCATCCACTTTCA.................................................................. 23 1 2 3.50 7 7 0 0
..............................................................................................................ATCACAAAGCCCATACACTTTCAC................................................................. 24 1 2 3.50 7 7 0 0
..............................................................................................................TTCCCAAAGCCCATACACTTTCA.................................................................. 23 1 2 3.00 6 6 0 0
..............................................................................................................TTCCCAAAGCCCATACACTTTCAC................................................................. 24 1 2 3.00 6 6 0 0
.............................................................................................................ATTCACAAAGCCCATACACTTTCACT................................................................ 26 2 2 3.00 6 6 0 0
.................................................................................................................ACAAAGCCCATACACTTTCA.................................................................. 20 0 2 2.50 5 4 1 0
...............................................................................................................TCACAAAGCCCATACACTTTC................................................................... 21 0 2 2.50 5 5 0 0
..............................................................................................................TTACCAAAGCCCATACACTTTCAC................................................................. 24 2 2 2.00 4 4 0 0
..............................................................................................................TTCACAAAGCCCATCCACTTTCACT................................................................ 25 2 2 2.00 4 3 0 1
..............................................................................................................TTCCCAAAGCCCATACCCTTTCA.................................................................. 23 2 2 2.00 4 4 0 0
..............................................................................................................TTCCCAAAGCCCATCCACTTTCA.................................................................. 23 2 2 2.00 4 4 0 0
..............................................................................................................TTCACAAAGCCCACACACTTTCA.................................................................. 23 1 2 2.00 4 4 0 0
..............................................................................................................TTCACAAATCCCATACACTTTCA.................................................................. 23 1 2 2.00 4 4 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTAACT................................................................ 25 2 2 2.00 4 4 0 0
..............................................................................................................TTCACAAATCCCATACACTTTCAC................................................................. 24 1 2 2.00 4 4 0 0
..............................................................................................................TTCACAAAGCCCATACCCTTTCACT................................................................ 25 2 2 2.00 4 4 0 0
...........................................................................................................AAATTCACAAAGCCCATACACTTTCAC................................................................. 27 2 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAGCCAATACACTTTCAC................................................................. 24 1 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAGCGCATACACTTTCA.................................................................. 23 1 2 1.50 3 2 1 0
..............................................................................................................TTCCCAAAGCCCATCCACTTTCAC................................................................. 24 2 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAGCCCATTCACTTTCAC................................................................. 24 1 2 1.50 3 1 1 1
..............................................................................................................TTCACAAAGCGCATACACTTTC................................................................... 22 1 2 1.50 3 1 2 0
...............................................................................................................TCACAAAGCCCATACACTTT.................................................................... 20 0 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAACCCATCCACTTTCAC................................................................. 24 2 2 1.50 3 3 0 0
.............................................................................................................CTTCACAAAGCCCATACACTTTCA.................................................................. 24 1 2 1.50 3 3 0 0
...........................................................................................................AAATTCACAAAGCCCATACACTTTCA.................................................................. 26 2 2 1.50 3 3 0 0
............................................................................................................AATTCACAAAGCCCATACACTTTCA.................................................................. 25 2 2 1.50 3 3 0 0
.............................................................................................................ATTCACAAAGCCCATACACTTTC................................................................... 23 1 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAGCGCATACACTTTCAC................................................................. 24 1 2 1.50 3 3 0 0
............................................................................................................AATTCACAAAGCCCATACACTTTCAC................................................................. 26 2 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAACCCATACACTTTC................................................................... 22 1 2 1.50 3 3 0 0
..............................................................................................................TTCGCAAAGCCCATACACTTTCAC................................................................. 24 1 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAGCCCATACACATTCA.................................................................. 23 1 2 1.50 3 3 0 0
..............................................................................................................CTCACAAAGCCCATACACTTTCACT................................................................ 25 2 2 1.50 3 3 0 0
..............................................................................................................TTCACAAAGCCCATGCACTTTCAC................................................................. 24 1 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAACCCATACACTTTCAC................................................................. 24 1 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCATT................................................................ 25 2 2 1.00 2 2 0 0
...............................................................................................................TCACAAAGCCCATACACTTTCAT................................................................. 23 1 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCAATACACTTTCA.................................................................. 23 1 3 1.00 3 3 0 0
..............................................................................................................TTCACAAAGCACATACACTTTCA.................................................................. 23 1 3 1.00 3 3 0 0
.........................................................................AAAGTGCACGTGCTTTGGGACATTTT.................................................................................................... 26 3 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTA................................................................... 22 1 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCTATACACTTTCAC................................................................. 24 1 2 1.00 2 2 0 0
..............................................................................................................TTCCCAAAGCCCATACCCTTTCAC................................................................. 24 2 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAACCCATACACTTTCA.................................................................. 23 1 2 1.00 2 2 0 0
.........................................................................AAAGTGCACGTGCTTTGGGAC......................................................................................................... 21 0 2 1.00 2 1 1 0
..............................................................................................................TTCACAAAGCCCATACACTTTGAC................................................................. 24 1 2 1.00 2 2 0 0
..............................................................................................................TTCACAAATCCCATACACTTTC................................................................... 22 1 2 1.00 2 1 1 0
.............................................................................................................ATTCACAAAGCCCCTACACTTTCAC................................................................. 25 2 2 1.00 2 2 0 0
.........................................................................AAAGTGCACGTGCTTTGGGACTAT...................................................................................................... 24 2 2 1.00 2 2 0 0
.............................................................................................................CTTCACAAAGCCCATACACTTT.................................................................... 22 1 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCAGA................................................................ 25 2 2 1.00 2 2 0 0
..............................................................................................................ATCACAAAGCCCATACACTTTCTC................................................................. 24 2 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCAAACACTTTCACT................................................................ 25 2 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCATACACT...................................................................... 19 0 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCACACACTTTCACT................................................................ 25 2 2 1.00 2 2 0 0
..............................................................................................................TTGCCAAAGCCCATACACTTTCAC................................................................. 24 2 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCCCT................................................................ 25 2 2 1.00 2 2 0 0
..............................................................................................................TTCTCAAAGCCCATCCACTTTCA.................................................................. 23 2 2 1.00 2 2 0 0
..............................................................................................................TTCACAAAGCACATACACTTTC................................................................... 22 1 3 0.67 2 0 2 0
..............................................................................................................TTCACAAAGCCCATACACTTTTT.................................................................. 23 2 3 0.67 2 2 0 0
..............................................................................................................TTCCCAAAGCCCATACCCTTTCACT................................................................ 25 3 3 0.67 2 2 0 0
..............................................................................................................TTCACAAAGCCAATACACTTTCC.................................................................. 23 2 3 0.67 2 2 0 0
..............................................................................................................TTCACAAAGCCCATACACTTA.................................................................... 21 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACGTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................GTCACAAAGCCCATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
.........................................................................AAAGTGCACGTGCTTTGGGATA........................................................................................................ 22 1 2 0.50 1 1 0 0
..............................................................................................................TTCACGAAGCCCATACACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................GTCACAAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCAG................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTGCCAAAGCCCATACACTTTCACT................................................................ 25 3 2 0.50 1 1 0 0
..............................................................................................................TTCACAATACCCATACACTTTCA.................................................................. 23 2 2 0.50 1 1 0 0
..............................................................................................................TTCACCAAGCCCATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCACATACACTTTCACT................................................................ 25 2 2 0.50 1 0 1 0
..............................................................................................................CTCACAAAGCCCATACACTTTCTCT................................................................ 25 3 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACATTTTC................................................................... 22 1 2 0.50 1 1 0 0
...............................................................................................................TCACAAAGCCCATACACTTTCT.................................................................. 22 1 2 0.50 1 1 0 0
..............................................................................................................TCCACAAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCGCAAAGCCCATCCACTTTCAC................................................................. 24 2 2 0.50 1 1 0 0
..............................................................................................................TTGACAAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCACAA............................................................... 26 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCAATGCACTTTCAC................................................................. 24 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTGA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACCCTTTTAC................................................................. 24 2 2 0.50 1 1 0 0
...............................................................................................................TCATAAAGCCCATACACTTTCA.................................................................. 22 1 2 0.50 1 1 0 0
..............................................................................................................TTCAAAAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..........................................................................AAGTGCACGTGCTTTGGGACA........................................................................................................ 21 0 2 0.50 1 1 0 0
..............................................................................................................CTCACAAAGCCCATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCAAAAAGCCCATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGTCCATACACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTATCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATGCACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCACACACTTTCACA................................................................ 25 2 2 0.50 1 1 0 0
...............................................................................................................TCACAAAGCCTATACACTTTCACT................................................................ 24 2 2 0.50 1 1 0 0
...............................................................................................................TCACAAAGCCTATACACTTTCAC................................................................. 23 1 2 0.50 1 0 1 0
..............................................................................................................TTCCCAAAGCCCATACACTTTC................................................................... 22 1 2 0.50 1 1 0 0
............................................................................................................CATTCACAAAGCCCATACACTTT.................................................................... 23 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACAC....................................................................... 18 0 2 0.50 1 0 1 0
..............................................................................................................TTCACAAACCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTTCCAAAGCCCATACACTTTCA.................................................................. 23 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCGCATACACTTT.................................................................... 21 1 2 0.50 1 0 1 0
..............................................................................................................TTCACAAAGCCTATACACTTT.................................................................... 21 1 2 0.50 1 1 0 0
..............................................................................................................TCCACAAAGCCCATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
.............................................................................................................ATTAACAACGCCCATACACTTTCAC................................................................. 25 3 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCGATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
...............................................................................................................TCACAAAGCCCATCCACTTTCA.................................................................. 22 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCTC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTACCAAAGCCCATACACTTTCA.................................................................. 23 2 2 0.50 1 1 0 0
..............................................................................................................TTCCCCAAGCCCATACACTTTCA.................................................................. 23 2 2 0.50 1 1 0 0
.............................................................................................................ATTCACAAAGCCCATACACTTT.................................................................... 22 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAACGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCTCT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTAACAAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
.................................................................................................................ACAAAGCCCATACACTTTCAA................................................................. 21 1 2 0.50 1 0 1 0
..............................................................................................................TTCACAAAGCCCAAACACATTCA.................................................................. 23 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCGCATACACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTTA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................ATCACAAAGCCCATACACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACCCTTGCAC................................................................. 24 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATATACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACCTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................GTCACAAAGCCAATACACTTTCGC................................................................. 24 3 2 0.50 1 1 0 0
.............................................................................................................ATTCACAAAGCTCATACACTTTC................................................................... 23 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCAATACACTTTCACT................................................................ 25 2 2 0.50 1 0 1 0
..............................................................................................................ATCACAAAGCCCATACACTTTCA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTCTCA.................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCAAACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
...........................................................................................................AGTTTCACAAAGCCCATACACTTTC................................................................... 25 2 2 0.50 1 0 1 0
..............................................................................................................TTCACAAAGCCCATACAATTTC................................................................... 22 1 2 0.50 1 1 0 0
........................................................................AAAAGTGCACGTGCTTTGGGAC......................................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................................AAAGTGCACGTGCTTTGGGAA......................................................................................................... 21 1 2 0.50 1 0 1 0
..............................................................................................................TTCACTAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTGACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACACAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
...............................................................................................................TCACAAAGCCCATACACTTTCCCT................................................................ 24 2 2 0.50 1 1 0 0
..............................................................................................................TTTCCAAAGCCCATACACTTTCAC................................................................. 24 2 2 0.50 1 1 0 0
..............................................................................................................TTCAAAAAGCCCATACACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTCCA.................................................................. 23 1 2 0.50 1 1 0 0
............................................................................................................AATTCACAAAGCCCATACACTTTCACT................................................................ 27 3 2 0.50 1 1 0 0
..............................................................................................................TTCCCAAAGCCCATACACTTTCACT................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATCCACTTTC................................................................... 22 1 2 0.50 1 0 1 0
..............................................................................................................TTCACAAAGCCCATACACTTTT................................................................... 22 1 2 0.50 1 1 0 0
.............................................................................................................ATTCACAAAGCCCCTACACTTTCA.................................................................. 24 2 2 0.50 1 1 0 0
..............................................................................................................TTCACCAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCACACACTTTC................................................................... 22 1 2 0.50 1 1 0 0
..............................................................................................................TTCCCAAAGCCCATCCACTTTCACT................................................................ 25 3 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATAAACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGACCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
...............................................................................................................TCAAAAAGCCCATACACTTTCAC................................................................. 23 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTAACA................................................................ 25 2 2 0.50 1 1 0 0
..............................................................................................................TTACCAAAGCCCATACACTTTCACT................................................................ 25 3 2 0.50 1 1 0 0
............................................................................................................ACTTCACAAAGCCCATACACTTTC................................................................... 24 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTGCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTCCG................................................................. 24 2 2 0.50 1 1 0 0
.............................................................................................................TTTCACAAAGCCCATACACTTTCAC................................................................. 25 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACGTTCAC................................................................. 24 1 2 0.50 1 1 0 0
................................................................................................................CACAAAGCCCATACACTTTC................................................................... 20 0 2 0.50 1 0 1 0
..............................................................................................................CTCCCAAAGCCCATACACTTTCAC................................................................. 24 2 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTCCAC................................................................. 24 1 2 0.50 1 1 0 0
.........................................................................AAAGTGCACGTGCTTTGGGACA........................................................................................................ 22 0 2 0.50 1 1 0 0
..............................................................................................................CTCACAAAGCCCATACACTTTCAC................................................................. 24 1 2 0.50 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACCCTTAAAC................................................................. 24 3 3 0.33 1 1 0 0
.............................................................................................................ATTCACAAAGCCCATACAATTTCA.................................................................. 24 2 3 0.33 1 1 0 0
..............................................................................................................ATCCCAAAGCCCATACACTTTCA.................................................................. 23 2 3 0.33 1 1 0 0
...............................................................................................................TCACAAAGCCCCTACACTTTCACT................................................................ 24 2 3 0.33 1 1 0 0
..............................................................................................................TTCACAAAGCCAATACACTTTCTCT................................................................ 25 3 3 0.33 1 1 0 0
..............................................................................................................TTGCCAAAGCCCATACACTTTC................................................................... 22 2 3 0.33 1 1 0 0
..............................................................................................................TTGCCAAAGCCCATACACTTTCA.................................................................. 23 2 3 0.33 1 1 0 0
..............................................................................................................TTCACAAAGCCCACACACTTTCAA................................................................. 24 2 3 0.33 1 1 0 0
..............................................................................................................TTCACAAAGCCAATACACTTT.................................................................... 21 1 3 0.33 1 0 1 0
..............................................................................................................TTCATAAAGCCCATACACTTT.................................................................... 21 1 3 0.33 1 1 0 0
..............................................................................................................TTCACAAAGCCAATGCACTTTCA.................................................................. 23 2 3 0.33 1 1 0 0
..............................................................................................................TTCACAAAGCCAATACACTTTC................................................................... 22 1 3 0.33 1 1 0 0
..............................................................................................................TTCACAAAGCACATACACTTTCT.................................................................. 23 2 3 0.33 1 1 0 0
......................................................................................................................GCCCATACACTTTCA.................................................................. 15 0 7 0.29 2 2 0 0
..............................................................................................................TTACCAAAGCCAATACACTTTCAC................................................................. 24 3 4 0.25 1 1 0 0
..............................................................................................................ATCCCAAAGCCCATACCCTTTCAC................................................................. 24 3 4 0.25 1 1 0 0
..............................................................................................................ATCACAAAGCCTATACACTTTCA.................................................................. 23 2 4 0.25 1 1 0 0
..............................................................................................................TTCACAAAACCCATACACTTTG................................................................... 22 2 4 0.25 1 1 0 0
............................................................................................................AATTCACAAAGCCCATACACTTTCAA................................................................. 26 3 4 0.25 1 1 0 0
..............................................................................................................TTCACAAAGCCCATCCACTT..................................................................... 20 1 4 0.25 1 1 0 0
.............................................................................................................................CACCTTCACCCTGTAGGTGAGTT................................................... 23 3 4 0.25 1 1 0 0
..............................................................................................................TTCCCAAACCCCATACACTTTC................................................................... 22 2 5 0.20 1 1 0 0
.............................................................................................................................CACATTCACCCTGTAGGTGAGTT................................................... 23 3 5 0.20 1 1 0 0
..............................................................................................................GTCACAAAGCCAATACACTTTC................................................................... 22 2 5 0.20 1 1 0 0
..............................................................................................................TTCCCAAAGCCCATCCACTTT.................................................................... 21 2 7 0.14 1 1 0 0
..............................................................................................................TTCACAAAGCCCATACACTTTTTT................................................................. 24 3 7 0.14 1 0 1 0
...............................................................................................................TCACAAAGCCCATAC......................................................................... 15 0 9 0.11 1 1 0 0
..............................................................................................................TTTCCAAAGCCCATACACTTT.................................................................... 21 2 11 0.09 1 1 0 0
..............................................................................................................TTCCCAAAGCCCATACACTTTTT.................................................................. 23 3 12 0.08 1 1 0 0
......................................................................................................................GCCCATACACTTTCACT................................................................ 17 1 20 0.05 1 1 0 0
..............................................................................................................TTCCCAAAGCCCATCCACTTTCT.................................................................. 23 3 20 0.05 1 1 0 0
..............................................................................................................TTCACAAAGCCAAAACACTTTAA.................................................................. 23 3 20 0.05 1 1 0 0

Anti-sense strand reads

TATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTACGGAACGAGGATGTTCTCATTTCACGTGCACGAAACCCTGTCACTCCTTTTATTACAAGTGTTTCGGGTATGTGAAAGTGGGAAATCCTCTCAACGTCGAAGGAAATGTGGACGAAGAATGTTTCATGTCGGTCCGATTAGTCTC
**************************************************..((((((.(((.((((((((.....(((((((((((.............))))).)))))).....)))))).)).))))))))).....********************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM