ID:

rno-mir-342

Coordinate:

chr6:132561169-132561267 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-46.6 -46.5 -46.5

Sense Strand Reads

CTGAAGACCACGATGAAGCTCCTGAACTGCCAGCACCATTTGTCACCTGTGAAAATGGGCTCAAGGTGAGGGGTGCTATCTGTGATTGAGGGACATGGTCAATGGAATTGTCTCACACAGAAATCGCACCCGTCACCTTGGCCTGCTGAGCACCACCCCGAACCAAGCAGCAGCCCTGGTGAAGTACCTGTGAGTGGCC
*****************************************************...((((.((((((((.((((((..((((((..(((((..(((.....)))......)))))))))))....)))))).)))))))))))).....**************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528818
Adult_testes_Mili_IP
GSM1528817
Adult_testes
..............................................................................................................TCTCACACAGAAATCGCACCCGTCT................................................................ 25 1 1 5474.00 5474 5296 139 39
..............................................................................................................TCTCACACAGAAATCGCACCCGTC................................................................. 24 0 1 5124.00 5124 4984 104 36
..............................................................................................................TCTCACACAGAAATCGCACCCGTCA................................................................ 25 0 1 2825.00 2825 2758 62 5
..............................................................................................................TCTCACACAGAAATCGCACCCGT.................................................................. 23 0 1 1362.00 1362 1247 77 38
..............................................................................................................TCTCACACAGAAATCGCACCCGTT................................................................. 24 1 1 389.00 389 378 5 6
...............................................................................................................CTCACACAGAAATCGCACCCGTC................................................................. 23 0 1 199.00 199 186 13 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTA................................................................. 24 1 1 181.00 181 168 11 2
................................................................................................................TCACACAGAAATCGCACCCGTCA................................................................ 23 0 1 180.00 180 174 0 6
..............................................................................................................TCTCACACAGAAATCGCACCCGTTT................................................................ 25 2 1 165.00 165 164 0 1
...............................................................................................................CTCACACAGAAATCGCACCCGTCT................................................................ 24 1 1 163.00 163 157 6 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAT............................................................... 26 1 1 144.00 144 143 0 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTAA................................................................ 25 1 1 130.00 130 128 2 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCA................................................................ 24 0 1 119.00 119 118 0 1
....................................................................AGGGGTGCTATCTGTGATTGAGG............................................................................................................ 23 0 1 102.00 102 93 8 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTAT................................................................ 25 2 1 87.00 87 87 0 0
.............................................................................................................ATCTCACACAGAAATCGCACCCGT.................................................................. 24 1 1 84.00 84 20 0 64
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTT............................................................... 26 2 1 78.00 78 76 0 2
.............................................................................................................ATCTCACACAGAAATCGCACCCGTC................................................................. 25 1 1 63.00 63 58 0 5
...............................................................................................................CTCACACAGAAATCGCACCCGT.................................................................. 22 0 1 63.00 63 61 0 2
.............................................................................................................ATCTCACACAGAAATCGCACCCGTCT................................................................ 26 2 1 61.00 61 58 0 3
..............................................................................................................TCTCACACAGAAATCGCACCCG................................................................... 22 0 1 54.00 54 32 13 9
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAA............................................................... 26 1 1 53.00 53 53 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAT............................................................... 24 1 1 44.00 44 44 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTTA................................................................ 25 1 1 37.00 37 37 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAA............................................................... 24 1 1 36.00 36 36 0 0
....................................................................AGGGGTGCTATCTGTGATTGAG............................................................................................................. 22 0 1 35.00 35 35 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCG................................................................ 25 1 1 35.00 35 34 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCT................................................................ 23 1 1 35.00 35 30 0 5
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTTT.............................................................. 27 3 1 34.00 34 34 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAC......................................................................................................... 25 0 1 27.00 27 27 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCGTCT................................................................ 25 2 1 27.00 27 24 3 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTA............................................................... 26 2 1 27.00 27 27 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGA.......................................................................................................... 25 0 1 24.00 24 23 0 1
.....................................................................GGGGTGCTATCTGTGATTGAGGG........................................................................................................... 23 0 1 23.00 23 13 9 1
..............................................................................................................TCTCACACAGACATCGCACCCGTCT................................................................ 25 2 1 23.00 23 22 1 0
.............................................................................................................ATCTCACACAGAAATCGCACCCGTCA................................................................ 26 1 1 22.00 22 19 3 0
..............................................................................................................TCTCACACCGAAATCGCACCCGTCA................................................................ 25 1 1 21.00 21 20 1 0
..............................................................................................................TCTCACACAGCAATCGCACCCGTCT................................................................ 25 2 1 21.00 21 20 1 0
...............................................................................................................CTCACACAGAAATCGCACCCGTT................................................................. 23 1 1 20.00 20 20 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTAA.............................................................. 27 3 1 18.00 18 18 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGG........................................................................................................... 24 0 1 18.00 18 18 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCGTC................................................................. 24 1 1 18.00 18 17 1 0
..............................................................................................................TCTCACACAGAAAACGCACCCGTC................................................................. 24 1 1 16.00 16 15 1 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAC......................................................................................................... 26 0 1 16.00 16 16 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGTC................................................................. 24 1 1 16.00 16 16 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCAT............................................................... 25 1 1 14.00 14 14 0 0
............................................................................................................AATCTCACACAGAAATCGCACCCGTC................................................................. 26 2 1 14.00 14 14 0 0
.................................................................................................................CACACAGAAATCGCACCCGT.................................................................. 20 0 1 13.00 13 2 0 11
..............................................................................................................TCTCACACAGAAACCGCACCCGTCT................................................................ 25 2 1 12.00 12 10 2 0
..............................................................................................................TCTCACACAGAAACCGCACCCGTC................................................................. 24 1 1 12.00 12 10 2 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGA.......................................................................................................... 24 0 1 12.00 12 12 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAG................................................................ 25 2 1 11.00 11 11 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTAT.............................................................. 27 3 1 11.00 11 11 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCATCT................................................................ 25 2 1 11.00 11 10 1 0
....................................................................AGGGGTGCTATCTGTGATTGAGGA........................................................................................................... 24 1 1 11.00 11 11 0 0
................................................................................................................TCACACAGAAATCGCACCCGTC................................................................. 22 0 1 11.00 11 10 0 1
....................................................................AGGGGTGCTATCTGTGATTGAGGT........................................................................................................... 24 1 1 10.00 10 10 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGTCA................................................................ 25 1 1 10.00 10 10 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGTCA................................................................ 25 1 1 10.00 10 10 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGA.................................................................. 23 1 1 10.00 10 10 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATT.............................................................. 27 2 1 10.00 10 9 0 1
..............................................................................................................TCTCACACAGCAATCGCACCCGTC................................................................. 24 1 1 9.00 9 9 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCCTC................................................................. 24 1 1 9.00 9 8 1 0
..............................................................................................................TCTCACACAGAAAACGCACCCGTCT................................................................ 25 2 1 9.00 9 8 1 0
..............................................................................................................TCTAACACAGAAATCGCACCCGTC................................................................. 24 1 1 9.00 9 9 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAT......................................................................................................... 26 1 1 9.00 9 9 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCC................................................................ 25 1 1 9.00 9 9 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTTA................................................................ 24 1 1 9.00 9 9 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAAA............................................................... 26 2 1 8.00 8 8 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAAA.............................................................. 25 2 1 8.00 8 8 0 0
..............................................................................................................TCTCACACAGAAATCGAACCCGTCT................................................................ 25 2 1 8.00 8 7 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCAAT.............................................................. 25 2 1 8.00 8 8 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTTTT............................................................... 26 3 1 8.00 8 8 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCCT................................................................ 25 2 1 8.00 8 8 0 0
..............................................................................................................TCTCACACAGAAACCGCACCCGTCA................................................................ 25 1 1 8.00 8 8 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAAT............................................................... 26 2 1 8.00 8 8 0 0
..............................................................................................................TCTCACACAGAAATAGCACCCGTCT................................................................ 25 2 1 8.00 8 7 1 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCTT............................................................... 25 2 1 8.00 8 8 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTAT................................................................ 24 2 1 8.00 8 8 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCATC................................................................. 24 2 1 7.00 7 7 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTC................................................................. 24 1 1 7.00 7 6 1 0
..............................................................................................................TCTAACACAGAAATCGCACCCGTCT................................................................ 25 2 1 7.00 7 6 0 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTG................................................................. 24 1 1 7.00 7 7 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCATC................................................................. 24 1 1 7.00 7 7 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCGT.................................................................. 23 1 1 7.00 7 6 1 0
.................................................................................................................CACACAGAAATCGCACCCGTCA................................................................ 22 0 1 6.00 6 4 0 2
..............................................................................................................TCTCACACAGAAATCGCACCCGGCT................................................................ 25 2 1 6.00 6 6 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTCT................................................................ 25 2 1 6.00 6 6 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGT.......................................................................................................... 25 1 1 6.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATTT............................................................. 28 2 1 6.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAAT.............................................................. 27 2 1 6.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCGT............................................................... 26 2 1 6.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCGAACCCGTC................................................................. 24 1 1 6.00 6 6 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAA......................................................................................................... 25 1 1 6.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCACACCCGTCT................................................................ 25 2 1 6.00 6 6 0 0
.................................................................................................................CACACAGAAATCGCACCCGTC................................................................. 21 0 1 6.00 6 2 0 4
..............................................................................................................TCTCACACAGAAATCGCACCCGTTAA............................................................... 26 2 1 6.00 6 6 0 0
....................................................................AGGGGTGCTATCTGTGATTGA.............................................................................................................. 21 0 1 6.00 6 5 0 1
.................................................................................................................CACACAGAAATCGCACCCGTCT................................................................ 22 1 1 6.00 6 1 0 5
..............................................................................................................TCTCACACAGAAATCCCACCCGTCT................................................................ 25 2 1 6.00 6 6 0 0
..............................................................................................................TCTCACAAAGAAATCGCACCCGTCT................................................................ 25 2 1 6.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCCTCT................................................................ 25 2 2 6.00 12 12 0 0
..............................................................................................................TCTCACACAGAAATCGTACCCGTCT................................................................ 25 2 1 6.00 6 5 0 1
.................................................................................................................CACACAGAAATCGCACCCGTCAT............................................................... 23 1 1 5.00 5 4 0 1
..............................................................................................................TCTCACACAGAAATCGCACCCGTTAT............................................................... 26 2 1 5.00 5 5 0 0
..............................................................................................................TCCCACACAGAAATCGCACCCGTCT................................................................ 25 2 1 5.00 5 5 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAAGA............................................................. 26 3 1 5.00 5 5 0 0
..............................................................................................................TCTCACACAGCAATCGCACCCGTCA................................................................ 25 1 1 5.00 5 5 0 0
..............................................................................................................TCTCACACAGAAATCGAACCCGTCA................................................................ 25 1 1 5.00 5 5 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGG............................................................................................................ 22 0 1 5.00 5 5 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGT.................................................................. 23 1 1 5.00 5 4 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCAT.................................................................. 23 1 1 5.00 5 4 1 0
..............................................................................................................TCTCACACAGAAATCGCACCC.................................................................... 21 0 1 5.00 5 5 0 0
..............................................................................................................TCTCATACAGAAATCGCACCCGTCT................................................................ 25 2 1 5.00 5 5 0 0
..............................................................................................................TCTCACAAAGAAATCGCACCCGTCA................................................................ 25 1 1 5.00 5 5 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCTTC................................................................. 24 2 1 5.00 5 5 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTC................................................................. 24 1 1 5.00 5 5 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCCTCA................................................................ 25 1 1 5.00 5 5 0 0
................................................................................................................ACACACAGAAATCGCACCCGT.................................................................. 21 1 1 5.00 5 0 0 5
..............................................................................................................TCTCACAAAGAAATCGCACCCGTC................................................................. 24 1 1 5.00 5 5 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAGA.............................................................. 25 2 1 5.00 5 1 4 0
..............................................................................................................TCTCACACAGAAATCCCACCCGTC................................................................. 24 1 1 5.00 5 5 0 0
..............................................................................................................TCTCACACAGAGATCGCACCCGTCT................................................................ 25 2 1 5.00 5 4 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCTT.................................................................. 23 1 1 5.00 5 0 5 0
....................................................................AGGGGTGCTATCTGTGATTGAGA............................................................................................................ 23 1 1 4.00 4 2 0 2
...............................................................................................................CTCACACAGAAATCGCACCCGTTT................................................................ 24 2 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATAGCACCCGTC................................................................. 24 1 1 4.00 4 3 0 1
.....................................................................GGGGTGCTATCTGTGATTGAGGT........................................................................................................... 23 1 1 4.00 4 3 1 0
..............................................................................................................TCTCACACAGAAATCACACCCGTC................................................................. 24 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGGCA................................................................ 25 1 1 4.00 4 3 1 0
..............................................................................................................TCTCACACAGAGATCGCACCCGTC................................................................. 24 1 1 4.00 4 3 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAG............................................................... 26 1 1 4.00 4 4 0 0
............................................................................................................AATCTCACACAGAAATCGCACCCGT.................................................................. 25 2 1 4.00 4 3 0 1
..............................................................................................................TCTAACACAGAAATCGCACCCGT.................................................................. 23 1 1 4.00 4 4 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCAA............................................................... 25 1 1 4.00 4 4 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCTC............................................................... 24 1 1 4.00 4 3 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCTAA.............................................................. 25 3 1 4.00 4 4 0 0
..............................................................................................................TCTAACACCGAAATCGCACCCGTCT................................................................ 25 3 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAC................................................................. 24 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTTA.............................................................. 27 3 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGCC................................................................. 24 2 1 4.00 4 4 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGAT......................................................................................................... 25 1 1 4.00 4 4 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTA................................................................. 23 1 1 4.00 4 4 0 0
...........................................................................................................GTCTCTCACACAGAAATCGCACCC.................................................................... 24 2 1 4.00 4 4 0 0
.............................................................................................................ATCTCACACAGAAATCGCACCCGTT................................................................. 25 2 1 4.00 4 0 0 4
......................................................................GGGTGCTATCTGTGATTGAGGGAC......................................................................................................... 24 0 1 4.00 4 4 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGCC................................................................. 23 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACATAGAAATCGCACCCGTCT................................................................ 25 2 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCATCA................................................................ 25 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTTATTT............................................................. 28 3 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCAACCGTCA................................................................ 25 1 1 4.00 4 3 1 0
............................................................................................................GTTCTCACACAGAAATCGCACCC.................................................................... 23 2 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAAACGCACCCGT.................................................................. 23 1 1 4.00 4 4 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCTT............................................................... 24 2 1 4.00 4 4 0 0
................................................................................................................TCACACAGAAATCGCACCCGT.................................................................. 21 0 1 4.00 4 3 0 1
..............................................................................................................TCTCACACAGAAATCGCACCCGAAA................................................................ 25 2 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGGAATCGCACCCGTC................................................................. 24 1 1 4.00 4 3 0 1
..............................................................................................................TCTCACACAGAAATAGCACCCGTCA................................................................ 25 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCAACCGT.................................................................. 23 1 1 4.00 4 3 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTCA................................................................ 25 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATAGCACCCGT.................................................................. 23 1 1 4.00 4 4 0 0
..............................................................................................................TCTCACACAGAAATCGCACC..................................................................... 20 0 1 4.00 4 2 0 2
..............................................................................................................TCTCACACAGAAATCGCCCCCGTCT................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTT................................................................. 24 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGTCA................................................................ 25 1 1 3.00 3 3 0 0
..............................................................................................................TCTCGCACAGAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCAGTC................................................................. 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGACATTGCACCCGTC................................................................. 24 2 1 3.00 3 3 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCG................................................................ 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCC................................................................. 24 1 1 3.00 3 2 1 0
..............................................................................................................TATCACACAGAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACACAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCTTTT................................................................ 25 3 1 3.00 3 3 0 0
....................................................................AGGGGTGCTATCTGTGATTG............................................................................................................... 20 0 1 3.00 3 0 0 3
..............................................................................................................TCTCACACAGAAATCTCACCCGTCT................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCCCACAGAAATCGCACCCGTCT................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCAACCGTC................................................................. 24 1 1 3.00 3 2 1 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGACT........................................................................................................ 27 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGTACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACGCAGAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGAAA................................................................ 24 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAT................................................................. 24 2 1 3.00 3 3 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAGTAT............................................................ 27 3 1 3.00 3 3 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGGC................................................................. 23 1 1 3.00 3 3 0 0
..............................................................................................................TCTAACACCGAAATCGCACCCGTC................................................................. 24 2 1 3.00 3 2 1 0
...............................................................................................................CTCCCACAGAAATCGCCCCCGTC................................................................. 23 2 1 3.00 3 2 1 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGACA........................................................................................................ 27 0 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGCCA................................................................ 25 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGATATCGCACCCGTCT................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCTTCT................................................................ 25 3 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTAG.............................................................. 27 3 1 3.00 3 3 0 0
............................................................................................................AATCTCACACAGAAATCGCACCCGTCT................................................................ 27 3 1 3.00 3 3 0 0
..............................................................................................................CCTCACACAGAAATCGCACCCGTCT................................................................ 25 2 2 3.00 6 5 1 0
...............................................................................................................CTCACACAGAAATCGCACCCGTGT................................................................ 24 2 1 3.00 3 3 0 0
..............................................................................................................TCTGACACCGAAATCGCACCCGTCT................................................................ 25 3 1 3.00 3 3 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCATCT................................................................ 25 3 2 3.00 6 6 0 0
..............................................................................................................TCTCACACAGAAATCGCAACCGTCT................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACATAGAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
..............................................................................................................TTTCACACAGAAATCGCACCCGTCT................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTGA................................................................ 25 1 1 3.00 3 3 0 0
..............................................................................................................TCTCCCACAGAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGGGAA......................................................................................................... 26 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGACATAGCACCCGTCA................................................................ 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACCCAGAAATCGCACCCGT.................................................................. 23 1 1 3.00 3 2 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCTA............................................................... 24 2 1 3.00 3 3 0 0
..............................................................................................................TCACACACAGAAATCGCACCCGTC................................................................. 24 1 1 3.00 3 3 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTTAT............................................................... 25 2 1 3.00 3 3 0 0
..............................................................................................................TCTCATACAGAAATCGCACCCGTCA................................................................ 25 1 1 3.00 3 3 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGACT........................................................................................................ 26 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAAGCGCACCCGTCT................................................................ 25 2 1 3.00 3 3 0 0
.....................................................................GGGGTGCTATCTGTGATTGAGGGT.......................................................................................................... 24 1 1 3.00 3 3 0 0
..............................................................................................................TCTTACACCGAAATCGCACCCGTC................................................................. 24 2 1 3.00 3 3 0 0
..............................................................................................................TCTTACACCGAAATAGCACCCGTC................................................................. 24 3 1 3.00 3 3 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCAAAA............................................................. 26 3 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGACATAGCACCCGTC................................................................. 24 2 1 3.00 3 3 0 0
..............................................................................................................TCTAACACCGAAATCGCACCCGT.................................................................. 23 2 1 3.00 3 3 0 0
..............................................................................................................TCTCACACGGAAATCGCACCCGTCA................................................................ 25 1 1 3.00 3 3 0 0
..............................................................................................................TGTCACACAGAAATCGCACCCGTCA................................................................ 25 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCATCA................................................................ 25 2 1 3.00 3 2 1 0
................................................................................................................TCACACAGAAATCGCACCCGTCATC.............................................................. 25 1 1 3.00 3 2 1 0
...........................................................................................................AAATCTCACACAGAAATCGCACCCGT.................................................................. 26 3 1 3.00 3 3 0 0
................................................................................................................TCACACAGAAATCGCACCCGTT................................................................. 22 1 1 3.00 3 3 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGG.................................................................. 23 1 1 3.00 3 2 1 0
..............................................................................................................TCTCACACAGAAACCGCACCCGTT................................................................. 24 2 1 3.00 3 3 0 0
.............................................................................................................ATCTCACACAGAAATCGCCCCCGTCT................................................................ 26 3 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTAATT.............................................................. 27 3 1 2.00 2 2 0 0
..............................................................................................................CCTCACACCGAAATCGCACCCGTCA................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTTAT............................................................. 28 3 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGTAATCGCACCCGTCA................................................................ 25 1 1 2.00 2 1 1 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTTTT............................................................. 28 3 1 2.00 2 2 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCATA.............................................................. 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCCCCCGTC................................................................. 24 1 1 2.00 2 2 0 0
....................................................................AGGGGTGCTATCTGTGATTGAGT............................................................................................................ 23 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGACA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACCGAAATAGCACCCGTCT................................................................ 25 3 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATTGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAACCGCACCCGTAA................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCTGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTTACACAGAAATCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGTCG................................................................ 25 2 1 2.00 2 1 1 0
..............................................................................................................TCTAACACCGAAATCGCACCCGTA................................................................. 24 3 1 2.00 2 2 0 0
..............................................................................................................TCTTACACAGAAATCGCACCCGTCT................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCAAACAGAAATCGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGAA................................................................. 24 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGTAATCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0
......................................................................GGGTGCTATCTGTGATTGAGG............................................................................................................ 21 0 1 2.00 2 2 0 0
.................................................................................................................CACACAGAAATCGCACCCGTCAA............................................................... 23 1 1 2.00 2 2 0 0
............................................................................................................AATCTCACACAGAAATCGCACCCGTCA................................................................ 27 2 1 2.00 2 2 0 0
...............................................................................................................ATCACACAGAAATCGCACCCGT.................................................................. 22 1 1 2.00 2 0 0 2
................................................................................................................TCACACAGAACTCGCACCCGTCA................................................................ 23 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGAACCCGT.................................................................. 23 1 1 2.00 2 1 1 0
..............................................................................................................TCTCACACAGAAATCACACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAACCGCACCCGT.................................................................. 23 1 1 2.00 2 1 0 1
..............................................................................................................TCTCACACAGGAATCGCACCCGT.................................................................. 23 1 1 2.00 2 1 1 0
.................................................................................................................CACACAGAAATCGCACCCGTAT................................................................ 22 2 1 2.00 2 2 0 0
.............................................................................................................CTCTCACACAGAAATCGCACCCGT.................................................................. 24 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGTAATCGCACCCGTCT................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTAAT............................................................. 28 3 1 2.00 2 2 0 0
..............................................................................................................TATCACACAGAAATCGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAAGCGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................CCTCACACCGAAATCGCACCCGTT................................................................. 24 3 1 2.00 2 2 0 0
..............................................................................................................TCTTACACCGAAATCGCACCCGTCA................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCAGACAGAAATCGCACCCGTCT................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCAATTTT........................................................... 30 3 1 2.00 2 2 0 0
......................................................................GGGTGCTATCTGTGATTGAGGA........................................................................................................... 22 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCATAT............................................................. 28 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACCGAAATCGCACCCAT.................................................................. 23 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGCAATCGCACCCGT.................................................................. 23 1 1 2.00 2 0 2 0
..............................................................................................................TCTCACACAGAAAGCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0
................................................................................................................TCACACAGAAATCGCACCCGTAAA............................................................... 24 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATTGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCTCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
...........................................................................................................AAATCTCACACAGAAATCGCACCCGTC................................................................. 27 3 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCATCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACACAAATCGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGTCTTA.............................................................. 26 3 1 2.00 2 2 0 0
.............................................................................................................TTCTCACACAGAAATCGCACCCGTCA................................................................ 26 1 1 2.00 2 2 0 0
.............................................................................................................ATCTCACACAGAAATCGCACCAGTCT................................................................ 26 3 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCCGTCTAGT............................................................. 28 3 1 2.00 2 2 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCATTA............................................................. 26 3 1 2.00 2 2 0 0
..............................................................................................................TCTCACGCAGAAATCGCACCCGTCT................................................................ 25 2 1 2.00 2 2 0 0
...............................................................................................................CTCACACAGAAATCGCACCCGA.................................................................. 22 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATGGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGACATCGCACCCGGCT................................................................ 25 3 1 2.00 2 2 0 0
..............................................................................................................TCTAACACCGAAATCGCACCCGTCA................................................................ 25 2 1 2.00 2 2 0 0
....................................................................CGGGGTGCTATCTGTGATTGAGG............................................................................................................ 23 1 1 2.00 2 1 1 0
..............................................................................................................TCTCACACCGAAATCGCACCCGTCAT............................................................... 26 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGGAATCGCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0
..............................................................................................................TATCACACAGAAATCGCACCCGT.................................................................. 23 1 1 2.00 2 1 0 1
................................................................................................................TCACACAGAAATCGCACCCGTCAAC.............................................................. 25 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAACTCGCACCCGTC................................................................. 24 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCAGTCT................................................................ 25 2 1 2.00 2 2 0 0
................................................................................................................TCTCACAGAAATCGCACCCGT.................................................................. 21 1 1 2.00 2 2 0 0
................................................................................................................TCACACAGAAATCACACCCGTCA................................................................ 23 1 1 2.00 2 2 0 0
................................................................................................................TCACACAGAAATCGCACCCGTCTTC.............................................................. 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGACATAGCACCCGT.................................................................. 23 2 1 2.00 2 2 0 0
..............................................................................................................ACTCACACCGAAATCGCACCCGTCA................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCCCACCCGT.................................................................. 23 1 1 2.00 2 2 0 0
..............................................................................................................ACTCACACAGAAATCGCACCCGT.................................................................. 23 1 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCGCACCTGTCT................................................................ 25 2 1 2.00 2 2 0 0
..............................................................................................................TCTCACACAGAAATCCCACCCGTCA................................................................ 25 1 1 2.00 2 2 0 0

Anti-sense strand reads

GACTTCTGGTGCTACTTCGAGGACTTGACGGTCGTGGTAAACAGTGGACACTTTTACCCGAGTTCCACTCCCCACGATAGACACTAACTCCCTGTACCAGTTACCTTAACAGAGTGTGTCTTTAGCGTGGGCAGTGGAACCGGACGACTCGTGGTGGGGCTTGGTTCGTCGTCGGGACCACTTCATGGACACTCACCGG
**************************************************...((((.((((((((.((((((..((((((..(((((..(((.....)))......)))))))))))....)))))).)))))))))))).....*****************************************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:46 PM