ID:

rno-mir-338

Coordinate:

chr10:109195251-109195316 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-40.2 -40.2 -40.2

Sense Strand Reads

AGTAGCGATGGACGAGCGGCCCGCCAGCCCCGACGCTGCCCAGGCCGTCCTCCCCAACAATATCCTGGTGCTGAGTGGGTGCACAGTGACTCCAGCATCAGTGATTTTGTTGAAGAGGGCAGCTGCCAGCCTCCTGTCCTGCCTGATGCCTAGCCCAGCTGCCCCA
****************************************..(((.((((((..((((((.((((((((((((...((((........))))))))))))).))).))))))..)))))).)))....**************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
..........................................................................................TCCAGCATCAGTGATTTTGTTGA..................................................... 23 0 1 5684.00 5684 5605 70 9
..........................................................................................TCCAGCATCAGTGATTTTGTTG...................................................... 22 0 1 1145.00 1145 1085 60 0
...........................................................................................CCAGCATCAGTGATTTTGTTGA..................................................... 22 0 1 406.00 406 399 7 0
..........................................................................................TCCAGCATCAGTGATTTTGTT....................................................... 21 0 1 353.00 353 342 11 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAA.................................................... 24 0 1 221.00 221 220 0 1
..........................................................................................TCCAGCATCAGTGATTTTGTTGT..................................................... 23 1 1 170.00 170 167 3 0
.........................................................................................ATCCAGCATCAGTGATTTTGTTGA..................................................... 24 1 1 142.00 142 124 4 14
..........................................................................................TCCAGCATCAGTGATTTTGT........................................................ 20 0 1 121.00 121 118 3 0
..........................................................................................TCCAGCATCAGTGCTTTTGTTGA..................................................... 23 1 1 58.00 58 56 0 2
..........................................................................................TCCCGCATCAGTGATTTTGTTGA..................................................... 23 1 1 56.00 56 56 0 0
.......................................................AACAATATCCTGGTGCTGAGTGG........................................................................................ 23 0 1 51.00 51 51 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTG...................................................... 21 0 1 51.00 51 50 1 0
.......................................................AACAATATCCTGGTGCTGAGT.......................................................................................... 21 0 1 42.00 42 41 1 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAAA................................................... 25 1 1 38.00 38 37 1 0
...........................................................................................CCAGCATCAGTGATTTTGTTGAA.................................................... 23 0 1 26.00 26 26 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAT.................................................... 24 1 1 24.00 24 24 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTA...................................................... 22 1 2 21.00 42 41 1 0
..........................................................................................TCCAGCATCAGTGATTTTG......................................................... 19 0 2 20.00 40 37 3 0
...........................................................................................CCAGCATCAGTGATTTTGTT....................................................... 20 0 1 19.00 19 16 3 0
..........................................................................................TCCAGCATCAGAGATTTTGTTGA..................................................... 23 1 1 18.00 18 18 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTCA..................................................... 23 1 1 17.00 17 17 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTTA..................................................... 23 1 1 16.00 16 16 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTAA..................................................... 23 1 2 16.00 32 32 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGT....................................................................................... 24 1 1 15.00 15 15 0 0
......................................................................................AAAATCCAGCATCAGTGATTTTGTTGA..................................................... 27 3 1 14.00 14 14 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAAG................................................... 25 0 1 14.00 14 14 0 0
.....................................................CCAACAATATCCTGGTGCTGAGT.......................................................................................... 23 0 1 13.00 13 13 0 0
.......................................................AACAATATCCTGGTGCTGAGTGT........................................................................................ 23 1 1 11.00 11 11 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAAT................................................... 25 1 1 11.00 11 11 0 0
..........................................................................................TCCAGCATCACTGATTTTGTTGA..................................................... 23 1 1 9.00 9 9 0 0
..........................................................................................TCCCGCATCAGTGCTTTTGTTGA..................................................... 23 2 1 9.00 9 9 0 0
..........................................................................................TCCAACATCAGTGATTTTGTTGA..................................................... 23 1 1 9.00 9 9 0 0
.......................................................AACAATATCCTGGTGCTGAGTG......................................................................................... 22 0 1 9.00 9 9 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAG.................................................... 24 1 1 8.00 8 8 0 0
..........................................................................................TCCAGCATCAGTGCTTTTGTT....................................................... 21 1 1 8.00 8 8 0 0
.........................................................................................ATCCAGCATCAGTGATTTTGTTGAA.................................................... 25 1 1 8.00 8 8 0 0
..........................................................................................TCCAGCATCAGCGATTTTGTTGA..................................................... 23 1 1 8.00 8 8 0 0
..........................................................................................TCCAGCATCAGTGGTTTTGTTGA..................................................... 23 1 1 8.00 8 8 0 0
........................................................................................AATCCAGCATCAGTGATTTTGTTGA..................................................... 25 1 1 8.00 8 8 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGA....................................................................................... 24 1 1 7.00 7 7 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGT..................................................... 22 1 1 7.00 7 7 0 0
.......................................................AACAATATCCTGGTGCTGAGTGA........................................................................................ 23 1 1 7.00 7 7 0 0
..........................................................................................TCCAGCTTCAGTGATTTTGTTGA..................................................... 23 1 1 6.00 6 6 0 0
..........................................................................................TCCAGCATCAGTGTTTTTGTTGA..................................................... 23 1 1 6.00 6 6 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGTT.................................................... 24 2 1 6.00 6 6 0 0
..........................................................................................TCCAGCATAAGTGATTTTGTTGA..................................................... 23 1 1 6.00 6 5 1 0
..........................................................................................TCCAGCATCAGTGATTTTGTTT...................................................... 22 1 1 6.00 6 6 0 0
.........................................................................................ATCCAGCATCAGTGATTTTGTTG...................................................... 23 1 1 6.00 6 5 1 0
..........................................................................................TCCCGCATCAGTGATTTTGTTG...................................................... 22 1 1 6.00 6 6 0 0
..........................................................................................TCCAGCATCAGTGACTTTGTTGA..................................................... 23 1 1 6.00 6 6 0 0
.......................................................AACAATATCCTGGTGCTGAGTAA........................................................................................ 23 2 1 5.00 5 5 0 0
..........................................................................................TCCAGCATCCGTGATTTTGTTGA..................................................... 23 1 1 5.00 5 5 0 0
..........................................................................................TCCAGCCTCAGTGATTTTGTTGA..................................................... 23 1 1 5.00 5 5 0 0
..........................................................................................TCCAGCATCTGTGATTTTGTTGA..................................................... 23 1 1 5.00 5 5 0 0
..........................................................................................CCCAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 5.00 5 5 0 0
..........................................................................................TCCAGCATCAGTGATTTT.......................................................... 18 0 2 4.50 9 9 0 0
..........................................................................................TCCCGCATCAGTGATTTTGTT....................................................... 21 1 1 4.00 4 4 0 0
..........................................................................................TCCAGCATCAGTGATTTCGTTGA..................................................... 23 1 1 4.00 4 4 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGTT...................................................................................... 25 1 1 4.00 4 4 0 0
........................................................ACAATATCCTGGTGCTGAGTGG........................................................................................ 22 0 1 4.00 4 4 0 0
.......................................................AACAATATCCTGGTGCTGAG........................................................................................... 20 0 1 4.00 4 4 0 0
..........................................................................................TCCAGCATCAGTGATTTTATTGA..................................................... 23 1 1 4.00 4 4 0 0
..........................................................................................TCCAGCATCAATGATTTTGTTGA..................................................... 23 1 1 4.00 4 4 0 0
..........................................................................................TCCAGCATCAGTGAATTTGTTGA..................................................... 23 1 1 4.00 4 4 0 0
..........................................................................................TCCAGCATCAGTGATTCTGTTGA..................................................... 23 1 1 4.00 4 4 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGTAA..................................................................................... 26 3 1 4.00 4 4 0 0
..........................................................................................TCCAGCATCATTGATTTTGTTG...................................................... 22 1 1 3.00 3 1 2 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGC..................................................... 23 1 1 3.00 3 3 0 0
..........................................................................................TCCAGCATCAGTGATTTTTTTGA..................................................... 23 1 1 3.00 3 3 0 0
..........................................................................................ACCAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 3.00 3 2 1 0
..........................................................................................TCCAGCATCAGTGTTTTTGTT....................................................... 21 1 1 3.00 3 3 0 0
...........................................................................................CCAGCATCAGTGATTTTGT........................................................ 19 0 1 3.00 3 3 0 0
..........................................................................................TCCAGCATCATTGATTTTGTTGA..................................................... 23 1 1 3.00 3 3 0 0
..........................................................................................TCCAGCATCAGTGCTTTTGTTG...................................................... 22 1 1 3.00 3 2 1 0
..........................................................................................TCAAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 3.00 3 3 0 0
..........................................................................................TCTAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 3.00 3 3 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGAAA................................................... 24 1 1 3.00 3 3 0 0
...........................................................................................CCAGCATCCGTGATTTTGTTGA..................................................... 22 1 1 3.00 3 3 0 0
............................................................................................CAGCATCAGTGATTTTGTTGA..................................................... 21 0 1 3.00 3 3 0 0
..........................................................................................TCCAGCATCAGTGATTTTGCTGA..................................................... 23 1 1 3.00 3 3 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGC..................................................... 22 1 1 3.00 3 3 0 0
.........................................................................................ATACAGCATCAGTGATTTTGTTGA..................................................... 24 2 1 3.00 3 3 0 0
.......................................................AACAATATCCTGGTGCTGAGTGATT...................................................................................... 25 2 1 3.00 3 3 0 0
..........................................................................................TCCAGCATCAGTGATTTTCTTGA..................................................... 23 1 1 3.00 3 3 0 0
..........................................................................................TCAAGCATCAGTGCTTTTGTTGA..................................................... 23 2 1 3.00 3 3 0 0
..........................................................................................TCCAGCATCAGTGATTTTTTTGAA.................................................... 24 1 1 3.00 3 3 0 0
.....................................................CCAACAATATCCTGGTGCTGA............................................................................................ 21 0 1 3.00 3 1 2 0
............................................................................................CAGCATCAGTGATTTTGTTGATC................................................... 23 2 2 2.50 5 5 0 0
...........................................................................................CCAGCATCAGTGAATTTGTTGA..................................................... 22 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCCGTGATTTTGTTG...................................................... 22 1 1 2.00 2 2 0 0
..........................................................................................GCCAGCATCAGTGATTTTGTTGC..................................................... 23 2 1 2.00 2 2 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGG..................................................... 22 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCACTGATTTTGTTG...................................................... 22 1 1 2.00 2 2 0 0
.....................................................CCAACAATATCCTGGTGCTGAGA.......................................................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................CCCCGCATCAGTGATTTTGTTGA..................................................... 23 2 1 2.00 2 2 0 0
..........................................................................................TCCAGCATAAGTGATTTTGTTG...................................................... 22 1 1 2.00 2 1 1 0
.......................................................AACAATATCCTGGTGCTGAGTA......................................................................................... 22 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATCTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TCCACCATCAGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGAA...................................................................................... 25 2 1 2.00 2 2 0 0
...........................................................................................CCAGCATCAGTGATTTTGATGA..................................................... 22 1 1 2.00 2 2 0 0
.......................................................AACAATATCCTGGTGCTGAGTAT........................................................................................ 23 2 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGATT................................................... 25 2 1 2.00 2 1 1 0
.......................................................AACAATATCCTGGTGCTGAGTTT........................................................................................ 23 2 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGTTTTTGTTG...................................................... 22 1 1 2.00 2 2 0 0
.........................................................................................ATCCAGCATCAGTGCTTTTGTTGA..................................................... 24 2 1 2.00 2 2 0 0
...........................................................................................CCGGCATCAGTGATTTTGTTGA..................................................... 22 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTCG..................................................... 23 2 1 2.00 2 0 0 2
..........................................................................................TCCAGCATCGGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TTCAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTAATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TGCAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 1 1 0
..........................................................................................TCCTGCATCAGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGCTTTTGTTGAA.................................................... 24 1 1 2.00 2 2 0 0
.......................................................AACAATATCCTGGTGCTGAGTAG........................................................................................ 23 1 1 2.00 2 2 0 0
...............................................................................................CATCAGTGATTTTGTTGA..................................................... 18 0 1 2.00 2 1 1 0
..........................................................................................TCCGGCATCAGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
......................................................AAACAATATCCTGGTGCTGAGT.......................................................................................... 22 1 1 2.00 2 1 1 0
.......................................................AACAATATCCTGGTGCTGAGTGC........................................................................................ 23 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGTA.................................................... 24 1 1 2.00 2 2 0 0
..........................................................................................TCCCGCATCAGTGATTTTGTTGAA.................................................... 24 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCGTCAGTGATTTTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TCCCGCATAAGTGATTTTGTTGA..................................................... 23 2 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATTATGTTGA..................................................... 23 1 1 2.00 2 2 0 0
...........................................................................................CCAGCATCAGTGCTTTTGTTGA..................................................... 22 1 1 2.00 2 1 1 0
...........................................................................................CCAGCATCAGCGATTTTGTTGA..................................................... 22 1 1 2.00 2 2 0 0
...........................................................................................CCAGCATAAGTGATTTTGTTGA..................................................... 22 1 1 2.00 2 2 0 0
..........................................................................................TCACGCATCAGTGATTTTGTTGA..................................................... 23 2 1 2.00 2 2 0 0
..........................................................................................TCCCGCATCAGTGATTCTGTTGA..................................................... 23 2 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATATTGTTGA..................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGGTTTTGTT....................................................... 21 1 1 2.00 2 2 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGTTTT.................................................................................... 27 3 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTCAA.................................................... 24 1 1 2.00 2 2 0 0
.....................................................CCAACAATATCCTGGTGCTGAGTGG........................................................................................ 25 0 1 2.00 2 2 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGTA...................................................................................... 25 2 1 2.00 2 2 0 0
................................................................................................ATCAGTGATTTTGTTGA..................................................... 17 0 1 2.00 2 0 2 0
.........................................................................................CTCCAGCATCAGTGATTTTGTTGA..................................................... 24 0 1 2.00 2 2 0 0
.............................................................................................AGCATCAGTGATTTTGTTGA..................................................... 20 0 1 2.00 2 2 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGAT.................................................... 23 1 1 2.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGATTTTGA........................................................ 20 1 3 1.67 5 4 1 0
..........................................................................................TCCAGCATCAGAGATTTTGTTGT..................................................... 23 2 2 1.50 3 3 0 0
..........................................................................................TCGCGCATCAGTGCTTTTGTTGA..................................................... 23 3 2 1.50 3 3 0 0
..........................................................................................TCCAGCATCAGGGATTTTGTTGA..................................................... 23 1 2 1.50 3 3 0 0
..........................................................................................TCCAGCATCAGAGATTTTGTT....................................................... 21 1 2 1.50 3 3 0 0
..........................................................................................TATAGCATCAGTGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTTGATGT..................................................... 22 2 1 1.00 1 1 0 0
..........................................................................................TCCAACATCAGTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
...........................................................................................CCCGCATCAGTGATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
....................................................ACCAACAATATCCTGGTGCTG............................................................................................. 21 1 1 1.00 1 0 1 0
.......................................................AACAATATCCTGGTGCTGAGTGGAT...................................................................................... 25 1 1 1.00 1 1 0 0
.......................................................................................AAATCCAGCATCAGTGATTTTGTTGA..................................................... 26 2 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGGA.................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TACAGCATCAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
......................................................TAACAATATCCTGGTGCTGAGT.......................................................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCATCATCAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGCTTTTGTTGT..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................GCCAGCATCAGTGATTTTGTTGT..................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGAAT................................................... 24 1 1 1.00 1 1 0 0
..........................................................................................TCCCGCATAAGTGATTTTGTT....................................................... 21 2 1 1.00 1 1 0 0
..........................................................................................TCTAGCATCAGCGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................CCCAGCATCAGTGATTTTGTTGG..................................................... 23 2 1 1.00 1 1 0 0
.........................................................................................GTCCAGCATCAGTGATTTTGTTGA..................................................... 24 1 1 1.00 1 1 0 0
...........................................................................................CTAGCATGAGTGATTTTGTTGA..................................................... 22 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCACCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................ACCTGCATCAGTGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGTATCAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGACTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCCGCATCAGTGATTTTGTTGAAT................................................... 25 2 1 1.00 1 1 0 0
..........................................................................................TCTAGCATCAGTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................TCGCGCATCAGTGATTTTGTT....................................................... 21 2 1 1.00 1 1 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGAAA..................................................................................... 26 3 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGCGATTTTGTTGT..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTAATTTTGTTGAA.................................................... 24 1 1 1.00 1 1 0 0
......................................................AAACAATATCCTGGTGCTGAGTGG........................................................................................ 24 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTTATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
.......................................................AACAATATTCTGGTGCTGAG........................................................................................... 20 1 1 1.00 1 1 0 0
..........................................................................................GCCAGCATCAGTGATTTTGTTGGA.................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGACTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCAGTGATATTGTTGA..................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................GCCAGCATCAGTGATTTTGT........................................................ 20 1 1 1.00 1 1 0 0
...............................................................................................CATCAGTGATTTTGTTGAA.................................................... 19 0 1 1.00 1 1 0 0
..........................................................................................TCCATCATCAGTGATTTTGTTGAT.................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTGGA..................................................... 23 1 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTAATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCAGTGATTTTGTAGA..................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAGA................................................... 25 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCCTCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..............................................................................................GCATCAGTGATTTTGTTG...................................................... 18 0 1 1.00 1 1 0 0
.........................................................................................ATCAAGCATCAGTGATTTTGTTGA..................................................... 24 2 1 1.00 1 0 0 1
.....................................................CCAACAATATCCTGGTGCTG............................................................................................. 20 0 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGCGCTTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................GCCAGCATCAGCGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGATGA.................................................. 26 1 1 1.00 1 0 1 0
..........................................................................................TCCCGCATCAGTGATTTTGTTA...................................................... 22 2 2 1.00 2 2 0 0
..........................................................................................TCCAGCATCAGTGAATTTGTTG...................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................CCAGCATCAGTCATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATTAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCGGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TACAGCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
.......................................................AACAATATCCCGGTGCTGAGT.......................................................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTAT........................................................ 20 1 1 1.00 1 1 0 0
...........................................................................................ACAGCATCCGTGATTTTGTTGA..................................................... 22 2 1 1.00 1 1 0 0
..........................................................................................TCCAGTATCAGTGATTTTGT........................................................ 20 1 1 1.00 1 1 0 0
...........................................................................................CAAGCATCAGTGATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGACTTTGTTGG..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGG..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGGTTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCCGCATCAGTGATTTTGTTGAC.................................................... 24 2 1 1.00 1 1 0 0
.........................................................................................CTCCAGCATCAGTGATTTTGTTGT..................................................... 24 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCCGTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGAGATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................ACCCGCATCAGTGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TTCAGCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGCTTTTATTGA..................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTGGTTGA..................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATAAGTGATTTTGTTTAA.................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATTAGTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................TCCCGCATCAGTGATTTTGTTGAT.................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGCTTTTGTTGAAA................................................... 25 2 1 1.00 1 1 0 0
...........................................................................................CCAGCACCAGTGATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
.....................................................CCAACAATATCCTGGTGCTGAGTT......................................................................................... 24 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAATGCTTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATAAGTGATTTTGTTCA..................................................... 23 2 1 1.00 1 1 0 0
........................................................................................AATCCAGCATCAGTGATTTTGCTGA..................................................... 25 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCACTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTCATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................CCCAGCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
.........................................................................................ATCCAGCAGCAGTGATTTTGTTGA..................................................... 24 2 1 1.00 1 1 0 0
.......................................................AACAATATCCTGGTGCTGAGTGAAA...................................................................................... 25 3 1 1.00 1 1 0 0
...........................................................................................CCAACATCAGTGATTTTGTTGA..................................................... 22 1 1 1.00 1 0 1 0
..........................................................................................TCCAGCATCAGTGATTTTGTGG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................ACCAGCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGGGATTTTGTTGA..................................................... 22 1 2 1.00 2 2 0 0
..........................................................................................ACCAGCATCAGTGATTTTGTTGC..................................................... 23 2 1 1.00 1 1 0 0
......................................................................................TCAATCCAGCATCAGTGATTTTGTTGA..................................................... 27 2 1 1.00 1 1 0 0
......................................................................................AAACTCCAGCATCTGTGATTTTGTTGA..................................................... 27 3 1 1.00 1 1 0 0
.....................................................................................ATCAATCCAGCATCAGTGATTTTGTTGA..................................................... 28 3 1 1.00 1 1 0 0
....................................................CCCAACAATATCCTGGTGCTGAA........................................................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TTCAGCATCAGTGCTTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCCGTGATTTTGTTGAAT................................................... 25 2 1 1.00 1 1 0 0
.........................................................................................ATCCAGTATCAGTGATTTTGTTGA..................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................TCTCGCATCAGCGATTTTGTTGA..................................................... 23 3 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTAGTTGA..................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCCGCATCAGAGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
....................................................................................ACGGAATCCAGCATCAGTGATTTTGTTGA..................................................... 29 3 1 1.00 1 0 1 0
..........................................................................................TCCAGCATCAGTGATTTTGTTGAGT................................................... 25 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTAGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCTGCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
.....................................................CCAACAATATTCTGGTGCTGAGT.......................................................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCCGCATCAGTGATTTTGTTGT..................................................... 23 2 1 1.00 1 1 0 0
...........................................................................................CTAGCATCAGTGATTTTGTTGA..................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCAACAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCGATGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
............................................................................................CAGCATCAGTGATTTTGTTGAAA................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCAGTATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATTAGTGATTTTGTTGAAG................................................... 25 1 1 1.00 1 1 0 0
..........................................................................................TCCATCATCAGTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCAGTGATTTTGTCGA..................................................... 24 2 1 1.00 1 1 0 0
.......................................................AACAATCTCCTGGTGCTGAGTGG........................................................................................ 23 1 1 1.00 1 1 0 0
..........................................................................................TCGCGCATCAGTGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTCT..................................................... 23 2 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCAGTGATTTTGTTGT..................................................... 24 2 1 1.00 1 1 0 0
.........................................................................................TTCCAGCATCAGTGATTTTGTTGA..................................................... 24 1 1 1.00 1 1 0 0
..........................................................................................TCCATCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGAGACTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCTCGCATCAGTGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
.....................................................................................CAGTCTCCAGCATCAGTGATTTTGTT....................................................... 26 3 1 1.00 1 0 1 0
..........................................................................................TCCCGCATCAGCGATTTTGTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCCGCATCAGTGCTTTTGTTGAA.................................................... 24 2 1 1.00 1 1 0 0
.....................................................GTAACAATATCCTGGTGCTGAGT.......................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATGAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
.......................................................AACAATATCCTGGTGCTGAGTGGAGA..................................................................................... 26 3 1 1.00 1 1 0 0
..........................................................................................TCAAGCATCAGTGATTTTGTT....................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTATTG...................................................... 22 1 1 1.00 1 0 1 0
...........................................................................................CCAGCATCCGTGATTTTGTT....................................................... 20 1 1 1.00 1 1 0 0
............................................................................................CAGCATCAGTGATTTTGTTG...................................................... 20 0 1 1.00 1 0 1 0
.....................................................ACAACAATATCCTGGTGCTGAGTGA........................................................................................ 25 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTAGTTGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCACGCATCAGTGCTTTTGTTGA..................................................... 23 3 4 1.00 4 4 0 0
..........................................................................................TCCCGCGTCAGTGATTTTGTTGA..................................................... 23 2 1 1.00 1 0 0 1
..........................................................................................TCCAGAATCAGTGATTTTTTTGA..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTAAA..................................................... 23 2 2 1.00 2 2 0 0
.......................................................AACAATATCCTGGTGTTGAGTA......................................................................................... 22 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTAATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGATT................................................... 24 2 1 1.00 1 1 0 0
......................................................CAACAATATCCTGGTGCTGAG........................................................................................... 21 0 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCAATGATTTTGTTGA..................................................... 24 2 1 1.00 1 1 0 0
..........................................................................................TCCGGCATCAGTGATTTTGTTG...................................................... 22 1 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCTGTGATTTTGTTGA..................................................... 24 2 1 1.00 1 1 0 0
.....................................................CCACCAATATCCTGGTGCTGAGTGG........................................................................................ 25 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCAGCAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTTGTTAAAGA.................................................. 26 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCGTCAGTGATTTTGTTGC..................................................... 23 2 1 1.00 1 1 0 0
..........................................................................................TCCAGCACCAGTGATTTTGTTGA..................................................... 23 1 1 1.00 1 1 0 0
.......................................................GACAATATCCTGGTGCTGAGTGGA....................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................................................CCAGCATCAGTGATTTTGTTGAAG................................................... 24 0 1 1.00 1 1 0 0
.......................................................AACCATATCCTGGTGCTGAGTGG........................................................................................ 23 1 1 1.00 1 1 0 0
.........................................................................................ATCCAGCATCAGTGATTTCGTTGA..................................................... 24 2 1 1.00 1 1 0 0
.......................................................AACAATACCCTGGTGCTGAGT.......................................................................................... 21 1 1 1.00 1 1 0 0
..........................................................................................TCCAGCATCAGTGATTTAGTT....................................................... 21 1 1 1.00 1 1 0 0
.......................................................................................GAATCCAGCATCAGTGATTTTGTTGA..................................................... 26 1 1 1.00 1 0 1 0

Anti-sense strand reads

TCATCGCTACCTGCTCGCCGGGCGGTCGGGGCTGCGACGGGTCCGGCAGGAGGGGTTGTTATAGGACCACGACTCACCCACGTGTCACTGAGGTCGTAGTCACTAAAACAACTTCTCCCGTCGACGGTCGGAGGACAGGACGGACTACGGATCGGGTCGACGGGGT
**************************************..(((.((((((..((((((.((((((((((((...((((........))))))))))))).))).))))))..)))))).)))....****************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
..........................................................................................AGGTCGTAGTCACTAAAACAACT..................................................... 23 0 1 94.00 94 89 5
.........................................................................................GAGGTCGTAGTCACTAAAACAACT..................................................... 24 0 1 60.00 60 59 1
........................................................................................TGAGGTCGTAGTCACTAAAACAACT..................................................... 25 0 1 48.00 48 47 1
.........................................................................................AAGGTCGTAGTCACTAAAACAACT..................................................... 24 1 1 23.00 23 22 1
...........................................................................................GGTCGTAGTCACTAAAACAACT..................................................... 22 0 1 6.00 6 3 3
...................................................AGGGTTGTTATAGGACCACGACT............................................................................................ 23 1 1 5.00 5 5 0
..........................................................................................AGGTCGTAGTCACTAAAACAACTT.................................................... 24 0 1 5.00 5 5 0
............................................................................................GTCGTAGTCACTAAAACAACT..................................................... 21 0 1 4.00 4 4 0
..........................................................................................AGGTCGTAGTCACTAAAACAAC...................................................... 22 0 1 4.00 4 4 0
............................................................................................GTCGTAGTCACTAAAACAACTT.................................................... 22 0 1 4.00 4 3 1
..................................................TGGGGTTGTTATAGGACCACGACT............................................................................................ 24 1 1 4.00 4 3 1
..................................................AGGGGTTGTTATAGGACCACGACT............................................................................................ 24 0 1 3.00 3 3 0
..........................................................................................AGGTCGTAGTCACTAAAACAACTA.................................................... 24 1 1 3.00 3 3 0
........................................................................................TAAGGTCGTAGTCACTAAAACAACT..................................................... 25 1 1 3.00 3 3 0
.........................................................................................GAGGTCGTAGTCACTAAAACAAC...................................................... 23 0 1 3.00 3 3 0
........................................................................................TGAGGTCGTAGTCACTAAAACAACTA.................................................... 26 1 1 2.00 2 2 0
........................................................................................TGAGGTCGTAGTCACTAAAACA........................................................ 22 0 1 2.00 2 2 0
........................................................................................AGAGGTCGTAGTCACTAAAACAACT..................................................... 25 1 1 2.00 2 2 0
...................................................GGGGTTGTTATAGGACCACGACT............................................................................................ 23 0 1 2.00 2 2 0
.........................................................................................GAGGTCGTAGTCACTAAAACAACTT.................................................... 25 0 1 2.00 2 2 0
........................................................................................AAAGGTCGTAGTCACTAAAACAACT..................................................... 25 2 1 2.00 2 0 2
....................................................GGGTTGTTATAGGACCACGACT............................................................................................ 22 0 1 2.00 2 2 0
..........................................................................................AAGTCGTAGTCACTAAAACAACT..................................................... 23 1 1 2.00 2 2 0
........................................................................................TGAGGTCGTAGTCACTACAACAAC...................................................... 24 1 1 1.00 1 1 0
.........................................................................................AAGGTCGTAGTCACTAAAACAACA..................................................... 24 2 1 1.00 1 1 0
..........................................................................................AGGTCGTAGTCACTAAAACACC...................................................... 22 1 1 1.00 1 0 1
.........................................................................................GAGGTTGTAGTCACTAAAACAACT..................................................... 24 1 1 1.00 1 1 0
..........................................................................................AGGTCGTAGTCACTAAAACCACT..................................................... 23 1 1 1.00 1 1 0
.........................................................................................GAGGTCGTAGTCACTAAAACCACT..................................................... 24 1 1 1.00 1 1 0
..................................................ATGGGTTGTTATAGGACCACGACT............................................................................................ 24 1 1 1.00 1 1 0
...........................................................................................GGTCGTAGTCACTAAAACAACTT.................................................... 23 0 1 1.00 1 1 0
........................................................................................TAAGGTCGTAGTCACTAAAACCACT..................................................... 25 2 1 1.00 1 1 0
........................................................................................TGAGGTCGTAGTCACCAACACAACT..................................................... 25 2 1 1.00 1 1 0
.........................................................................................GGGGTCGTAGTCACTAAAACAACT..................................................... 24 1 1 1.00 1 1 0
........................................................................................TGAGGTCGTAGTCACTAAAACTACT..................................................... 25 1 1 1.00 1 1 0
..................................................TGGGGTTGTTATAGGCCCACAACT............................................................................................ 24 3 1 1.00 1 1 0
........................................................................................TTTGGTCGTAGTCACTAAAACAACT..................................................... 25 2 1 1.00 1 1 0
...................................................................................GTCACTGAGGTCGTAGTCACTAAAACAACT..................................................... 30 0 1 1.00 1 0 1
.........................................................................................GAGGTAGTAGTCACTAAAACAACT..................................................... 24 1 1 1.00 1 1 0
...................................................AGGGTTGTTATAGGACCACGAC............................................................................................. 22 1 1 1.00 1 0 1
...........................................................................................TGTCGTAGTCACTAAAACAAC...................................................... 21 1 1 1.00 1 1 0
........................................................................................TGAGGTCGTAGTCACTAAAACAAC...................................................... 24 0 1 1.00 1 1 0
...........................................................................................GGTCGTAGTCACTAAAACAAC...................................................... 21 0 1 1.00 1 0 1
........................................................................................TGTGGTCGTAATCACTAAAACAACT..................................................... 25 2 1 1.00 1 1 0
...........................................................................................AGTCGTAGTCACTAAAACAACT..................................................... 22 1 2 0.50 1 0 1
..........................................................................................AGGTCGTAGTCACTAAAA.......................................................... 18 0 2 0.50 1 0 1
.........................................................................................AACGTCGTAGTCACTAAAACCACT..................................................... 24 3 3 0.33 1 1 0

Generated: 04/30/2015 at 05:33 PM