ID:rno-mir-329 |
Coordinate:chr6:133862168-133862264 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -36.6 | -36.3 |
 |
 |
|
CTTCCAGGTCTGAAGGTCACGTTGGGGAAGTTCCGAGGTAGTCTTGTCAGTGTTCGCTTCTGGTACCGGAAGAGAGGTTTTCTGGGTCTCTGTTTCTTTGATGAGAATGAAACACACCCAGCTAACCTTTTTTTCAGTATCAAATCCCATCTTGGAGGCTTCATGGTCCAGACCCCAGTCTCAGGGAAGGATGGTCC
*********************************************************...((((((.((((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))).)))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| ..............................................................................................................AACACACCCAGCTAACCTTTTT................................................................. | 22 | 0 | 1 | 506.00 | 506 | 505 | 1 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTT................................................................ | 23 | 0 | 1 | 301.00 | 301 | 301 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTC..................................................................................................... | 24 | 0 | 1 | 162.00 | 162 | 162 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTT...................................................................................................... | 23 | 0 | 1 | 143.00 | 143 | 143 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTT.................................................................. | 21 | 0 | 1 | 100.00 | 100 | 98 | 1 | 1 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCT.................................................................................................... | 25 | 0 | 1 | 66.00 | 66 | 66 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCA.................................................................................................... | 25 | 1 | 1 | 57.00 | 57 | 57 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTA................................................................. | 22 | 1 | 1 | 33.00 | 33 | 33 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTTT............................................................... | 24 | 0 | 1 | 32.00 | 32 | 32 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTT..................................................................................................... | 24 | 1 | 1 | 32.00 | 32 | 32 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTA................................................................ | 23 | 1 | 1 | 31.00 | 31 | 31 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTC..................................................................................................... | 23 | 0 | 1 | 28.00 | 28 | 28 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTA..................................................................................................... | 24 | 1 | 1 | 25.00 | 25 | 25 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTT................................................................... | 20 | 0 | 1 | 24.00 | 24 | 23 | 1 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTAT................................................................ | 23 | 1 | 1 | 23.00 | 23 | 23 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCAA................................................................................................... | 26 | 2 | 1 | 22.00 | 22 | 22 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTA...................................................................................................... | 23 | 1 | 1 | 21.00 | 21 | 21 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTT................................................................. | 21 | 0 | 1 | 15.00 | 15 | 15 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTT................................................................ | 22 | 0 | 1 | 15.00 | 15 | 15 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTTA............................................................... | 24 | 1 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTCT................................................................ | 23 | 1 | 1 | 12.00 | 12 | 12 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTAA............................................................... | 24 | 2 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTAAA................................................................................................... | 26 | 3 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTAT............................................................... | 24 | 1 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTAA..................................................................................................... | 24 | 2 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTAA.................................................................................................... | 25 | 2 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTTT................................................................. | 22 | 1 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTTT.................................................................................................... | 25 | 1 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTAACCTTTTT................................................................. | 23 | 0 | 1 | 8.00 | 8 | 8 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCAT................................................................................................... | 26 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTCT.................................................................................................... | 24 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTACCCTTTTT................................................................. | 22 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTCA.................................................................................................... | 24 | 1 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTT.................................................................... | 19 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTAT.................................................................................................... | 25 | 1 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTAACCTTTTCT................................................................ | 24 | 1 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTACCCTTTTTT................................................................ | 23 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTT....................................................................................................... | 22 | 0 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTAT..................................................................................................... | 24 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCAAT.................................................................................................. | 27 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTGT................................................................ | 23 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ..........................................................................AGGTTTTCTGGGTCTCTGTTTC..................................................................................................... | 22 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTGT................................................................ | 22 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTAAT................................................................................................... | 26 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTAACCTTTTTT................................................................ | 24 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTAT...................................................................................................... | 23 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTTA............................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................................AACACACCCAGATAACCTTTTT................................................................. | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTGACCTTTT.................................................................. | 21 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCAAA.................................................................................................. | 27 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTT...................................................................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTA..................................................................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGT........................................................................................................ | 21 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTTTT................................................................ | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .......................................................................AAGAGGTTTTCTGGGTCTCTGTTTC..................................................................................................... | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTC................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTAACCTTTT.................................................................. | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTTTA................................................................ | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTAA.................................................................................................... | 24 | 2 | 2 | 2.00 | 4 | 4 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTAA............................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTATA................................................................................................... | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCACCTAACCTTTTT................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACTCCCAGCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTAA...................................................................................................... | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTA................................................................ | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTAAT.................................................................................................... | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ................................................................................................................CACACCCAGCTAACCTTTTT................................................................. | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTAGT................................................................................................... | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................CACACACCCAGCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTTTT.............................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTTACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCACCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTGACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCAAG.................................................................................................. | 27 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTAACCTTTTAT................................................................ | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................TACACACCCAGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTT.................................................................. | 21 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTACCCTTTTTT................................................................ | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTAA...................................................................................................... | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .......................................................................AAGAGGTTTTCTGGGTCTCTGTTTCT.................................................................................................... | 26 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAACTAACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .......................................................................AAGAGGTTTTCTGGGTCTCTGTTTAT.................................................................................................... | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTCG.................................................................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTTTTT............................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .........................................................................................................GAAGGAACACACCCAGCTAACCTTTTTT................................................................ | 28 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCT.......................................................................................................... | 19 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTTTA.............................................................. | 25 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTCTAG.............................................................. | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTG................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTATT............................................................... | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTT.................................................................. | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTAAA.................................................................................................... | 25 | 3 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| ...........................................................................................................ATAAACACACCCAGCTAACCTTTT.................................................................. | 24 | 2 | 2 | 1.50 | 3 | 3 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTAAGT.................................................................................................. | 26 | 3 | 4 | 1.25 | 5 | 5 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTAAT.................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTTA.................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTAAC................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTGC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTC................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGCTTCT.................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTT....................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGCTCTCTGTTTCT.................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTCT............................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AAAACACCCAGCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTACCCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ACACCCAGCTAACCTTTTT................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTA................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTATT............................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTATCA.................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTTC............................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCACTGTTT...................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGCCTCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAACTAACCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGTTCTCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................................ACACCCAGCTAACCTTTTTT................................................................ | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGATAACCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGGTTTCTGGGTCTCTGTTTA..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................AGGTTTTCTGGGTCTCTGTTTCA.................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCCGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTGT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AAAACACCCAGCTAACCTTTTTTT............................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTC.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................................................................AAAACACACCCAGCTAACCTTTTTT................................................................ | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTAGGTCTCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTATAT................................................................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTGA..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................ACCACACCCAGCTAACCTTTTTTT............................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTCGGTCTCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCAAGCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACCCCCAGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCAGGGTCTCTGTTTCA.................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTGTT..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................TGAAACACACCCAGCTAACCTTT................................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCG.................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTAT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCTAGCTAACCTTTTTTT............................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTAACCTTTTA................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTTTT.............................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTAACCTTTTTTA............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTATCT.................................................................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................CGAGGTTTTCTGGGTCTCTGTTTCA.................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TACCCACCCAGCTAACCTTTTTT................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AAAACACCCAGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTAT................................................................ | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTCAA................................................................................................... | 25 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCTTT.................................................................................................. | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGACGTTTTCTGGGTCTCTGTTTT..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGTTCTCTGTTTC..................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACATTTTTT................................................................ | 23 | 1 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAACTAACCTTTTTTT............................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTAACCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTTAAT.................................................................................................. | 27 | 3 | 3 | 1.00 | 3 | 3 | 0 | 0 |
| ........................................................................AGCGGTTTTCTGGGTCTCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTTACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACGTTTTTT................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTCTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTACTGGGTCTCTGTCTC..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCGA................................................................................................... | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGCTT...................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................AGGTAACACACCCAGCTAACCTTTTT................................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGGTTTCTGGGTCTCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................AAACACACCCAGCTCACCTTTT.................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTATTAT................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTTT..................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTCACCTTTTTT................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTT................................................................... | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACCCCCAGCTAACCTTTTTT................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGGCTCTGTTT...................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCTT................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGCGTCTCTGTTTCT.................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGGTAACCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTTAT................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................AAGAGGTTTTCTGGGTCTCTGTTTA..................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................AAACACACCCCGCTAACCTTTTT................................................................. | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGTTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCAAGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTCA................................................................ | 23 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTTTT............................................................... | 23 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGTTAACCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTC...................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..........................................................................................................GGGAAACACACCCAGCTAACCTTTTTT................................................................ | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGATAACCTTTTTT................................................................ | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTATT.................................................................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCTAAA................................................................................................. | 28 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAACTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACAAACCCAGCTAACCTTTT.................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................AAAAACACACCCAGCTAACCTTTTTT................................................................ | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGCGGTTTTCTGGGTCTCTGTTTT..................................................................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACTCAGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCCGCTAACCTTTTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAGCCTTTTTTA............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGATAACCTTTTTC................................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................................................................CACACCCAGCTAACCTTT................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................AAAAACACACCCAGCTAACCTTTTTC................................................................ | 26 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ..............................................................................................................AACCCACCCAGCTACCCTTTTTTT............................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGTGGTTTTCTGGGTCTCTGTTT...................................................................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTATTT................................................................. | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTATCTGTTTC..................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTATA..................................................................................................... | 24 | 2 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTTAA................................................................................................... | 26 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTAAA..................................................................................................... | 24 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTGCAA................................................................................................... | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTA.................................................................. | 21 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTATGTTTT..................................................................................................... | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..........................................................................AGGTTTTCTGGGTCTCTGTTTA..................................................................................................... | 22 | 1 | 4 | 0.50 | 2 | 2 | 0 | 0 |
| ..........................................................................................................GTTCAACACACCCAGCTAACCTTTTT................................................................. | 26 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .................................................................................................................ACACCCAGCTAACCTTTTTAAC.............................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAGCCTTTTA................................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................CGAGGTTTTCTGGGTCTCTGTTTAA.................................................................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................AGAAGTTTTCTGGGTCTCTGTTA...................................................................................................... | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGATCTCTGTTTT..................................................................................................... | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AAACCACCCAGCTAACCTTTTTT................................................................ | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTATCCTTTTTT................................................................ | 23 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTTTGT................................................................ | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTTAT.............................................................. | 25 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTCTATTT................................................................................................ | 29 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGGCTCTGTTTT..................................................................................................... | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACATAGCTAACCTTTTTT................................................................ | 23 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCAAGCTACCCTTTTT................................................................. | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTCTCTGTTTTTAT.................................................................................................. | 27 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTAA................................................................ | 23 | 2 | 10 | 0.40 | 4 | 4 | 0 | 0 |
| ..............................................................................................................ACCACACCCAGCTAACCTTTTTT................................................................ | 23 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACCCACCAAGCTAACCTTTTTT................................................................ | 23 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTCACCTTT................................................................... | 20 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGTTAACCTTTTTA................................................................ | 23 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACTCAGCTAACCTTTTA................................................................. | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTGGGTATCTGTTTA..................................................................................................... | 24 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCCCCTAACCTTTTT................................................................. | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| .................................................................................................................ACACCCAGCTAACCTTTTTA................................................................ | 20 | 1 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGTTACCCTTTTT................................................................. | 22 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ........................................................................AGGGGCTTTCTGGGTCTCTGTTTC..................................................................................................... | 24 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..............................................................................................................CACCCACCCAGCTAACCTTTTTT................................................................ | 23 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCCAACCTTTTA................................................................. | 22 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ..............................................................................................................TACACACCCAGATAACCTTTT.................................................................. | 21 | 2 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .........................................................................GAGGTTTTCTGGGTCTCTGTTAGA.................................................................................................... | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACCCCCAGCTAACCTTTTCA................................................................ | 23 | 3 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTAACCTTTTTAAA.............................................................. | 25 | 3 | 12 | 0.17 | 2 | 2 | 0 | 0 |
| ..............................................................................................................CACCCACCCAGCTAACCTTTTT................................................................. | 22 | 2 | 6 | 0.17 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACTCACCCAGCTACCCTTTTAT................................................................ | 23 | 3 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| ...............................................................................................................ACACACCCAGCTAACCTTTTAA................................................................ | 22 | 2 | 11 | 0.09 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACACAGCTAACTTTTTT................................................................. | 22 | 2 | 12 | 0.08 | 1 | 1 | 0 | 0 |
| ........................................................................GGAAGTTTTCTGGGTCTCTGT........................................................................................................ | 21 | 2 | 14 | 0.07 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACCCCCCGCTACCCTTTTT................................................................. | 22 | 3 | 15 | 0.07 | 1 | 1 | 0 | 0 |
| ........................................................................AGAGGTTTTCTAGCTCTCTGTCT...................................................................................................... | 23 | 3 | 15 | 0.07 | 1 | 1 | 0 | 0 |
| ..............................................................................................................AACACACCCAGCTACCTTTTT.................................................................. | 21 | 2 | 19 | 0.05 | 1 | 1 | 0 | 0 |
|
GAAGGTCCAGACTTCCAGTGCAACCCCTTCAAGGCTCCATCAGAACAGTCACAAGCGAAGACCATGGCCTTCTCTCCAAAAGACCCAGAGACAAAGAAACTACTCTTACTTTGTGTGGGTCGATTGGAAAAAAAGTCATAGTTTAGGGTAGAACCTCCGAAGTACCAGGTCTGGGGTCAGAGTCCCTTCCTACCAGG
**************************************************...((((((.((((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))).)))))).....********************************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:47 PM