ID:

rno-mir-323

 Coordinate:

chr6:133861199-133861284 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-33.7 -33.3

Sense Strand Reads

ACATCTGCTTTGAGGAAGAGCCAGTGTCCCGGTCTCCCTACTGCTGCTGCTTGGTACTTGGAGAGAGGTGGTCCGTGGCGCGTTCGCTTCATTTATGGCGCACATTACACGGTCGACCTCTTTGCGGTATCTAATCCCGCCTTGCGAGCTTTCCTGGAGCTAACACCAGCTATGGGGTGGGGACAC
**************************************************..(((((.((.((((((((...(((((....((.((((........)))).))....)))))...)))))))).))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes
...................................................................................................GCACATTACACGGTCGACCTCT................................................................. 22 0 1 31.00 31 30 1
....................................................................................................CACATTACACGGTCGACCTCT................................................................. 21 0 1 8.00 8 8 0
...................................................................................................GCACATTACACGGTCGACCTCTA................................................................ 23 1 1 8.00 8 8 0
...................................................................................................GCACATTACACGGTCGACCTCA................................................................. 22 1 1 7.00 7 7 0
...................................................................................................GCACATTACACGGTCGACCTCTAT............................................................... 24 1 1 5.00 5 5 0
....................................................................................................CACATTACACGGTCGACCTTT................................................................. 21 1 1 2.00 2 2 0
.................................................................AGGTGGTCCGTGGCGCGTTCG.................................................................................................... 21 0 1 2.00 2 2 0
....................................................................................................CACATTACACGGTCGACCTCTAAT.............................................................. 24 3 1 2.00 2 2 0
....................................................................................................CACATTACACGGTCGACCTCAAT............................................................... 23 2 1 2.00 2 2 0
....................................................................................................CACATTACACGGTCGACCT................................................................... 19 0 1 2.00 2 2 0
...................................................................................................GCACATTACACGGTCGACCTC.................................................................. 21 0 1 2.00 2 2 0
...................................................................................................GCACATTACACGGTCGACCTCTAG............................................................... 24 2 1 2.00 2 2 0
.................................................................AGGTGGTCCGTGGCGCGTTCGCAAGA............................................................................................... 26 3 1 2.00 2 2 0
....................................................................................................CACATTACACGGTCGACCTC.................................................................. 20 0 1 1.00 1 1 0
...................................................................................................GCACATTACACGGTCGACCTCAAT............................................................... 24 2 1 1.00 1 1 0
....................................................................................................CACATTACACGGTAGACCTCT................................................................. 21 1 1 1.00 1 1 0
.................................................................AGGTGGTCCGTGGCACGTTCGCAA................................................................................................. 24 3 1 1.00 1 1 0
.................................................................AGGTGGTCCGTGGCGCGTTCGCTT................................................................................................. 24 0 1 1.00 1 1 0
...................................................................................................GCACATTACACGGTCGACCTCTAA............................................................... 24 2 1 1.00 1 1 0
.................................................................AGGTGGTCCGTGGCGCGTTCGCTAT................................................................................................ 25 2 1 1.00 1 1 0
..................................................................................................AGCACATTACACGGTCGACCTC.................................................................. 22 1 1 1.00 1 1 0
.................................................................AGGTGGTCCGTGGCGCGTTCA.................................................................................................... 21 1 1 1.00 1 1 0
....................................................................................................CACATTACACGGTCGACCTCTAA............................................................... 23 2 1 1.00 1 1 0
.................................................................AGGTGGTCCGTGGCGCGTTCT.................................................................................................... 21 1 1 1.00 1 1 0
......................................................................................................CATTACACGGTCGACCTCT................................................................. 19 0 1 1.00 1 1 0
...................................................................................................GCACATTACACGGTCGACCTCTTTAT............................................................. 26 2 1 1.00 1 1 0
...................................................................................................GCACATTACACGGTCGACCTCTTT............................................................... 24 0 1 1.00 1 1 0
.................................................................AGGTGGTCCGTGGCGCGTTCGC................................................................................................... 22 0 1 1.00 1 1 0
...................................................................................................GCACATTACACGGTCGACCTTA................................................................. 22 2 1 1.00 1 1 0
...................................................................................................GCACATTACACGGTCGACCTCTAC............................................................... 24 2 1 1.00 1 1 0

Anti-sense strand reads

TGTAGACGAAACTCCTTCTCGGTCACAGGGCCAGAGGGATGACGACGACGAACCATGAACCTCTCTCCACCAGGCACCGCGCAAGCGAAGTAAATACCGCGTGTAATGTGCCAGCTGGAGAAACGCCATAGATTAGGGCGGAACGCTCGAAAGGACCTCGATTGTGGTCGATACCCCACCCCTGTG
**************************************************..(((((.((.((((((((...(((((....((.((((........)))).))....)))))...)))))))).))))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:47 PM