ID:

rno-mir-322-1

 Coordinate:

chrX:158148161-158148255 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

mature
  1. chrX:158148183-158148204 +
  2. chrX:158584564-158584585 +
star
  1. chrX:158148221-158148241 +
  2. chrX:158584602-158584622 +

Sense Strand Reads

CTACTCACAGAGACTTTCTTCATTCGCAGGTACCCCAGAGCGGCCCCCACCCTCGCTGACTCCGAAGGGATGCAGCAGCAATTCATGTTTTGGAGTATTGCCAAGGTTCAAAACATGAAGCGCTGCAACACCCCTTCGTGGGAAATAGAGAGGTGGGGTCCTGCACAACAGACCTGTGTGGGTTCTACTAAAGCA
*********************************************************..((((((((((.((..(((((..(((((((((((((............)))))))))))))..)))))..)).))))))).)))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
........................................................................CAGCAGCAATTCATGTTTTGGA..................................................................................................... 22 0 2 8718.00 17436 16490 763 183
........................................................................CAGCAGCAATTCATGTTTTGGAA.................................................................................................... 23 1 2 4570.00 9140 9052 77 11
........................................................................CAGCAGCAATTCATGTTTTGGAT.................................................................................................... 23 1 2 1138.50 2277 2250 24 3
........................................................................CAGCAGCAATTCATGTTTTGG...................................................................................................... 21 0 2 1063.50 2127 2005 79 43
........................................................................CAGCAGCAATTCATGTTTTG....................................................................................................... 20 0 2 840.50 1681 1643 19 19
........................................................................CAGCAGCAATTCATGTTTTGGAAA................................................................................................... 24 2 2 650.00 1300 1295 2 3
.......................................................................GCAGCAGCAATTCATGTTTTGGA..................................................................................................... 23 0 2 576.50 1153 1098 27 28
.......................................................................GCAGCAGCAATTCATGTTTTGG...................................................................................................... 22 0 2 373.00 746 719 5 22
.......................................................................ACAGCAGCAATTCATGTTTTGGA..................................................................................................... 23 1 2 287.50 575 565 8 2
......................................................................AGCAGCAGCAATTCATGTTTTGGA..................................................................................................... 24 1 2 256.50 513 512 1 0
.........................................................................AGCAGCAATTCATGTTTTGGA..................................................................................................... 21 0 2 247.00 494 475 13 6
.......................................................................GCAGCAGCAATTCATGTTTTGA...................................................................................................... 22 1 2 179.50 359 339 14 6
.......................................................................ACAGCAGCAATTCATGTTTTGGAA.................................................................................................... 24 2 2 162.50 325 324 1 0
........................................................................CAGCAGCAATTCATGTTTTGT...................................................................................................... 21 1 2 145.50 291 287 4 0
.........................................................................AGCAGCAATTCATGTTTTGGAA.................................................................................................... 22 1 2 138.50 277 276 1 0
........................................................................CAGCAGCAATTCATGTTTTGGAG.................................................................................................... 23 0 2 111.00 222 206 1 15
........................................................................CAGCAGCAATTCATGTTTTGGT..................................................................................................... 22 1 2 105.50 211 208 1 2
........................................................................CAGCAGCAATTCATGTTTTGGAAT................................................................................................... 24 1 2 97.50 195 193 1 1
........................................................................CAGCAGCAATTCATGTTTTGGATT................................................................................................... 24 1 2 90.00 180 180 0 0
..............................................................................................................AAACATGAAGCGCTGCAACAC................................................................ 21 0 2 89.00 178 162 14 2
..............................................................................................................AAACATGAAGCGCTGCAACA................................................................. 20 0 2 78.50 157 141 14 2
........................................................................CAGCAGCAATTCATGTTTT........................................................................................................ 19 0 2 76.00 152 147 5 0
.......................................................................GCAGCAGCAATTCATGTTTTG....................................................................................................... 21 0 2 69.50 139 116 11 12
............................................................................................................CAAAACATGAAGCGCTGCAACA................................................................. 22 0 2 68.50 137 134 3 0
........................................................................CAGCAGCAATTCATGTTTTGA...................................................................................................... 21 1 2 68.00 136 108 18 10
..............................................................................................................AAACATGAAGCGCTGCAACACT............................................................... 22 1 2 61.00 122 120 2 0
........................................................................CAGCAGCAATTCATGTTTTGGC..................................................................................................... 22 1 2 52.50 105 100 0 5
........................................................................CAGCAGCACTTCATGTTTTGGA..................................................................................................... 22 1 2 52.50 105 103 0 2
.......................................................................GCAGCAGCAATTCATGTTTTGGAA.................................................................................................... 24 1 2 51.00 102 102 0 0
........................................................................CAGCAGCACTTCATGTTTTGGAA.................................................................................................... 23 2 2 43.50 87 87 0 0
............................................................................................................CAAAACATGAAGCGCTGCAACAA................................................................ 23 1 2 41.00 82 80 2 0
.............................................................................................................AAAACATGAAGCGCTGCAACA................................................................. 21 0 2 36.00 72 67 5 0
........................................................................CAGCAGCAATTAATGTTTTGGA..................................................................................................... 22 1 2 34.50 69 69 0 0
........................................................................CAGCAGCAATTCATGTTTTGGTA.................................................................................................... 23 2 2 34.00 68 68 0 0
........................................................................CAGCAGCATTTCATGTTTTGGAA.................................................................................................... 23 2 3 32.67 98 98 0 0
........................................................................CAGCAGCATTTCATGTTTTGGA..................................................................................................... 22 1 3 31.33 94 94 0 0
.........................................................................AGCAGCAATTCATGTTTTGGAT.................................................................................................... 22 1 2 30.50 61 61 0 0
........................................................................CAGCAGCCATTCATGTTTTGGA..................................................................................................... 22 1 2 30.00 60 56 0 4
........................................................................CAGCAGCAATTCATGTTTTGGAAAA.................................................................................................. 25 2 2 26.00 52 52 0 0
.............................................................................................................AAAACATGAAGCGCTGCAACAC................................................................ 22 0 2 26.00 52 50 2 0
........................................................................CAGCAGCAATTCACGTTTTGGA..................................................................................................... 22 1 2 25.50 51 48 1 2
.........................................................................AGCAGCAATTCATGTTTTG....................................................................................................... 19 0 2 24.50 49 48 1 0
.......................................................................GCAGCAGCAATTCATGTTTTGGAT.................................................................................................... 24 1 2 24.00 48 47 1 0
......................................................................TGCAGCAGCAATTCATGTTTTGA...................................................................................................... 23 1 2 24.00 48 46 0 2
........................................................................CAGCAGCAATTCATGTTTTGGAGA................................................................................................... 24 1 2 22.50 45 42 0 3
......................................................................TGCAGCAGCAATTCATGTTTTG....................................................................................................... 22 0 2 22.00 44 42 2 0
......................................................................TGCAGCAGCAATTCATGTTTTGGA..................................................................................................... 24 0 2 22.00 44 44 0 0
.......................................................................GCAGCAGCAATTCATGTTTTGGT..................................................................................................... 23 1 2 22.00 44 44 0 0
.............................................................................GCAATTCATGTTTTGGA..................................................................................................... 17 0 2 22.00 44 36 1 7
......................................................................TGCAGCAGCAATTCATGTTTTGG...................................................................................................... 23 0 2 21.50 43 43 0 0
........................................................................CAGCAGCAATTCATGTTTTGGATA................................................................................................... 24 2 2 21.50 43 43 0 0
........................................................................CAGCAGCAATTCATGTTTTGGCA.................................................................................................... 23 2 4 21.25 85 85 0 0
.........................................................................AGCAGCAATTCATGTTTTGG...................................................................................................... 20 0 2 20.00 40 39 1 0
.............................................................................................................AAAACATGAAGCGCTGCAACACT............................................................... 23 1 2 19.50 39 39 0 0
.......................................................................ACAGCAGCAATTCATGTTTTGGAT.................................................................................................... 24 2 2 18.50 37 37 0 0
......................................................................AACAGCAGCAATTCATGTTTTGGA..................................................................................................... 24 2 2 18.50 37 37 0 0
........................................................................CAGCAGCAATTCATGTTTTGGTCG................................................................................................... 24 3 2 18.00 36 0 0 36
........................................................................CAGCAGCAATTCATGTTTTGAA..................................................................................................... 22 1 2 17.00 34 31 3 0
........................................................................TAGCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 17.00 34 34 0 0
............................................................................................................CAAAACATGAAGCGCTGCAAC.................................................................. 21 0 2 17.00 34 31 3 0
........................................................................CAGCAGCAATTCATGTTTTGGTT.................................................................................................... 23 2 2 16.50 33 33 0 0
............................................................................................................CAAAACATGAAGCGCTGCAA................................................................... 20 0 2 16.50 33 31 1 1
........................................................................CAGCAGCCATTCATGTTTTGGAA.................................................................................................... 23 2 2 16.50 33 33 0 0
.......................................................................ACAGCAGCAATTCATGTTTTGGAAA................................................................................................... 25 3 2 16.00 32 32 0 0
............................................................................................................CAAAACATGAAGCGCTGCAACAT................................................................ 23 1 2 15.50 31 31 0 0
..............................................................................................................AAACATGAAGCGCTGCAACAA................................................................ 21 1 2 15.50 31 24 4 3
........................................................................CAGCAGCAATTCATGTTTTGGAC.................................................................................................... 23 1 2 15.50 31 31 0 0
.......................................................................GCAGCAGCAATTCCTGTTTTGGA..................................................................................................... 23 1 2 15.00 30 27 1 2
........................................................................CAGCAGCAATTCAAGTTTTGGA..................................................................................................... 22 1 2 15.00 30 28 0 2
..........................................................................GCAGCAATTCATGTTTTGGA..................................................................................................... 20 0 2 14.50 29 29 0 0
........................................................................CAGCAGCAATTCATGTTTTGGG..................................................................................................... 22 1 2 14.50 29 29 0 0
........................................................................CAGCAGCAATTAATGTTTTGGAA.................................................................................................... 23 2 2 14.00 28 28 0 0
........................................................................CAGCAGCAATTTATGTTTTGGA..................................................................................................... 22 1 2 13.50 27 25 0 2
........................................................................CAGCAGCAATTCATGTTTTGAAA.................................................................................................... 23 2 2 13.50 27 26 1 0
........................................................................CAGCAGCAATTCATGTTT......................................................................................................... 18 0 2 13.00 26 25 1 0
..............................................................................................................AAACATGAAGCGCTGCAACAT................................................................ 21 1 2 13.00 26 24 2 0
........................................................................CAGAAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 12.50 25 24 0 1
.......................................................................GCAGCAGCAATTCATGTTTT........................................................................................................ 20 0 2 12.50 25 21 4 0
.......................................................................GCAGCAGCAATTCATGTTTTGAA..................................................................................................... 23 1 2 12.00 24 23 1 0
........................................................................CAGCAGCAATTCATGTTTTGGGA.................................................................................................... 23 2 2 11.50 23 23 0 0
.....................................................................ATGCAGCAGCAATTCATGTTTTGGA..................................................................................................... 25 0 2 11.00 22 22 0 0
........................................................................CAGCAGCAGTTCATGTTTTGGA..................................................................................................... 22 1 2 10.50 21 20 1 0
........................................................................CAACAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 10.00 20 17 3 0
.......................................................................GCAGCAGCAATTCATGTTTTGT...................................................................................................... 22 1 2 10.00 20 20 0 0
........................................................................CAGCAGCACTTCATGTTTTGGAT.................................................................................................... 23 2 2 10.00 20 20 0 0
.......................................................................ACAGCAGCAATTCATGTTTTGG...................................................................................................... 22 1 2 10.00 20 19 1 0
........................................................................CAGCAGCAATCCATGTTTTGGA..................................................................................................... 22 1 2 9.50 19 17 2 0
........................................................................CAGCAGCAATTCAAGTTTTGGAA.................................................................................................... 23 2 2 9.50 19 19 0 0
........................................................................CAGCAGCAATTCATGTTTTGGCT.................................................................................................... 23 2 2 9.50 19 19 0 0
........................................................................CAGCAGCAATTCATGTTTTGGAAG................................................................................................... 24 2 3 9.33 28 28 0 0
.........................................................................AGCAGCAATTCATGTTTTGGAAA................................................................................................... 23 2 4 9.00 36 35 1 0
.......................................................................ACAGCAGCAATTCATGTTTTG....................................................................................................... 21 1 2 9.00 18 17 1 0
.......................................................................GCAGCAGCAATTCCTGTTTTGG...................................................................................................... 22 1 2 9.00 18 17 0 1
..............................................................................................................AAACATGAAGCGCTGCAAC.................................................................. 19 0 2 9.00 18 16 2 0
........................................................................CAGCAGCAATTCATGTTTTGGAAAT.................................................................................................. 25 3 3 8.67 26 26 0 0
........................................................................CAGCAGCAATTCATGTTTTGTAA.................................................................................................... 23 2 2 8.50 17 17 0 0
.........................................................................AGCAGCAATTCATGTTTTGGAAC................................................................................................... 23 2 2 8.50 17 17 0 0
........................................................................CAGCAGCAATTCACGTTTTGGAA.................................................................................................... 23 2 3 8.33 25 25 0 0
........................................................................CAGCAGCAATTAATGTTTTGGAT.................................................................................................... 23 2 2 8.00 16 16 0 0
........................................................................CAGCAGCAATTCATCTTTTGGA..................................................................................................... 22 1 2 8.00 16 14 2 0
...........................................................................CAGCAATTCATGTTTTGGA..................................................................................................... 19 0 2 8.00 16 14 0 2
........................................................................CAGCAGCATTTCATGTTTTGGAT.................................................................................................... 23 2 3 8.00 24 24 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACA............................................................... 22 1 2 8.00 16 15 1 0
........................................................................CAGCAGCAATTCATGTTTTGGATTT.................................................................................................. 25 2 2 8.00 16 15 0 1
.........................................................................AGCAGCAATTCATGTTTTGGAAT................................................................................................... 23 1 2 7.50 15 15 0 0
........................................................................CAGCAGCACTTCATGTTTTGGT..................................................................................................... 22 2 2 7.50 15 15 0 0
........................................................................CAGCAGCAATTCATGTTTTGGAGT................................................................................................... 24 0 2 7.50 15 15 0 0
.............................................................................................................AAAACATGAAGCGCTGCAAC.................................................................. 20 0 2 7.50 15 13 2 0
........................................................................CAGTAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 7.00 14 13 1 0
........................................................................AAGCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 7.00 14 13 0 1
........................................................................CAGCAGAAATTCATGTTTTGGA..................................................................................................... 22 1 2 7.00 14 12 2 0
..............................................................................................................AAACATGAAGCGCTGCAACACC............................................................... 22 0 2 7.00 14 14 0 0
........................................................................CAGAAGCACTTCATGTTTTGGA..................................................................................................... 22 2 5 7.00 35 35 0 0
........................................................................CAGTAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 7.00 14 14 0 0
........................................................................CAGCAGCAATTCATATTTTGGA..................................................................................................... 22 1 2 6.50 13 11 2 0
........................................................................CAGCAGCAATTCATGCTTTGGA..................................................................................................... 22 1 2 6.50 13 12 1 0
..............................................................................................................AAACATGAAGCGCTGCAACACAA.............................................................. 23 2 2 6.50 13 13 0 0
.............................................................................................................AAAACATGAAGCGCTGCAACAA................................................................ 22 1 2 6.50 13 13 0 0
.........................................................................AGCAGCAATTCATGTTTTGGAC.................................................................................................... 22 1 2 6.00 12 12 0 0
.......................................................................GCAGCAGCCATTCATGTTTTGGA..................................................................................................... 23 1 2 6.00 12 11 0 1
........................................................................CAGCAGCAATTCATGTTTTGTA..................................................................................................... 22 1 2 6.00 12 12 0 0
........................................................................CAGCCGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 6.00 12 11 0 1
.......................................................................GCAGCAGCAATTCATGTTT......................................................................................................... 19 0 2 6.00 12 12 0 0
........................................................................CACCAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 5.50 11 11 0 0
........................................................................CAGCAGCACTTCATGTTTTGGG..................................................................................................... 22 2 2 5.50 11 10 0 1
........................................................................CAGCAGCAATTCATTTTTTGGA..................................................................................................... 22 1 2 5.50 11 7 1 3
.....................................................................AAACAGCAGCAATTCATGTTTTGGA..................................................................................................... 25 2 2 5.50 11 11 0 0
............................................................................................................CAAAACATGAAGCGCTGCA.................................................................... 19 0 2 5.50 11 5 0 6
........................................................................CAGCAGCACTTCATGTTTTGG...................................................................................................... 21 1 2 5.50 11 11 0 0
........................................................................CAGCAGCAATTCATGTTTTGGATCG.................................................................................................. 25 3 2 5.50 11 0 0 11
.......................................................................GCAGCAGCAATTCATGTTTTGTA..................................................................................................... 23 1 2 5.50 11 11 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACTA.............................................................. 23 2 2 5.50 11 11 0 0
........................................................................CAGCAGCAATTAATGTTTTGG...................................................................................................... 21 1 2 5.50 11 11 0 0
........................................................................CAGCAGCAATTTATGTTTTGGAA.................................................................................................... 23 2 3 5.33 16 16 0 0
........................................................................CAGCAGCAGTTCATGTTTTGGAA.................................................................................................... 23 2 3 5.33 16 16 0 0
........................................................................CAGCAGCAATTCATGTTTTA....................................................................................................... 20 1 4 5.25 21 21 0 0
......................................................................TGCAGCAGCAATTCATGTTTTGGT..................................................................................................... 24 1 2 5.00 10 10 0 0
............................................................................................................CAAAACATGAAGCGCTGCAACAC................................................................ 23 0 2 5.00 10 10 0 0
.............................................................................................................AAAACATGAAGCGCTGCAA................................................................... 19 0 2 5.00 10 8 2 0
..........................................................................GCAGCAATTCATGTTTTGGAA.................................................................................................... 21 1 2 5.00 10 10 0 0
........................................................................CAGCAGCAATTCATGTTTTT....................................................................................................... 20 1 2 5.00 10 10 0 0
........................................................................CAGCAGCAATTCATGTTTTGGAAC................................................................................................... 24 2 2 5.00 10 10 0 0
........................................................................CACCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 5.00 10 9 1 0
.............................................................................................................AAAACATGAAGCGCTGCAACACA............................................................... 23 1 2 5.00 10 10 0 0
........................................................................CAGCAGCAATTCATGTTTTTGA..................................................................................................... 22 1 2 4.50 9 9 0 0
.......................................................................GCAGCAGCAATTCATGTTTTGC...................................................................................................... 22 1 2 4.50 9 9 0 0
........................................................................CATCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 4.50 9 5 4 0
.........................................................................AGCAGCAATTCATGTTTTGGT..................................................................................................... 21 1 2 4.50 9 9 0 0
........................................................................CCGCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 4.50 9 6 3 0
............................................................................AGCAATTCATGTTTTGGA..................................................................................................... 18 0 2 4.50 9 2 0 7
.......................................................................ACAGCAGCAATTCCTGTTTTGGA..................................................................................................... 23 2 2 4.50 9 9 0 0
........................................................................CAGCAGCACTTCATGTTTTGGC..................................................................................................... 22 2 2 4.50 9 9 0 0
........................................................................AAGCAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 4.50 9 9 0 0
........................................................................CAGCAACAATTCATGTTTTGGA..................................................................................................... 22 1 2 4.00 8 8 0 0
.......................................................................ACAGCAGCAATTCATGTTTTGGT..................................................................................................... 23 2 2 4.00 8 8 0 0
......................................................................AACAGCAGCAATTCATGTTTTGGAA.................................................................................................... 25 3 3 4.00 12 12 0 0
........................................................................CAGCAGCACTTCATGTTTTG....................................................................................................... 20 1 2 4.00 8 7 0 1
............................................................................................................CAAAACATGAAGCGCTGCAACACT............................................................... 24 1 2 4.00 8 8 0 0
............................................................................................................CAAAACATGAAGCGCTGCAAT.................................................................. 21 1 2 4.00 8 8 0 0
........................................................................CAGCAGCAATTCATGTTTAGGA..................................................................................................... 22 1 2 4.00 8 8 0 0
......................................................................AGCAGCAGCAATTCCTGTTTTGGA..................................................................................................... 24 2 2 4.00 8 8 0 0
...........................................................................CAGCAATTCATGTTTTGGAA.................................................................................................... 20 1 2 4.00 8 8 0 0
.............................................................................................................AAAACATGAAGCGCTGCAACAT................................................................ 22 1 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCATGTTTTCGA..................................................................................................... 22 1 2 3.50 7 7 0 0
..............................................................................................................AAACATGAAGCGCTGCAACAAA............................................................... 22 2 2 3.50 7 7 0 0
........................................................................CAGCATCAATTCATGTTTTGGA..................................................................................................... 22 1 2 3.50 7 6 1 0
........................................................................CAGCAGCAATTCATGTTTTGGTTT................................................................................................... 24 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTGATGTTTTGGA..................................................................................................... 22 1 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCAGGTTTTGGA..................................................................................................... 22 1 2 3.50 7 7 0 0
.....................................................................AAGCAGCAGCAATTCATGTTTTGGA..................................................................................................... 25 1 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCATGTTTCGGAA.................................................................................................... 23 2 2 3.50 7 7 0 0
......................................................................AACAGCAGCAATTCATGTTTTGG...................................................................................................... 23 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCACGTTTTG....................................................................................................... 20 1 2 3.50 7 7 0 0
........................................................................CAGCAACAATTCATGTTTTGGAA.................................................................................................... 23 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCATGTCTTGGA..................................................................................................... 22 1 2 3.50 7 7 0 0
......................................................................TGCAGCAGCAATTCATGTTTTGT...................................................................................................... 23 1 2 3.50 7 7 0 0
........................................................................CAGCAGTAATTCATGTTTTGGA..................................................................................................... 22 1 2 3.50 7 6 1 0
............................................................................................................AAAAACATGAAGCGCTGCAACACT............................................................... 24 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCCTGTTTTGGA..................................................................................................... 22 1 2 3.50 7 6 0 1
........................................................................CAGAAGCAATTCATGTTTTGGAT.................................................................................................... 23 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATCCATGTTTTGGAA.................................................................................................... 23 2 2 3.50 7 7 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACAT.............................................................. 23 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCATGTATTGGA..................................................................................................... 22 1 2 3.50 7 7 0 0
........................................................................CAACAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 3.50 7 7 0 0
..........................................................................GCAGCAATTCATGTTTTGG...................................................................................................... 19 0 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCATGTTTTGGTAT................................................................................................... 24 2 2 3.50 7 7 0 0
........................................................................CAGCAGAAATTCATGTTTTGGAA.................................................................................................... 23 2 2 3.50 7 7 0 0
........................................................................CAGCAGCAATTCATGTTTTGGATTTT................................................................................................. 26 2 2 3.00 6 6 0 0
.........................................................................AGCAGCAATTCCTGTTTTGGA..................................................................................................... 21 1 2 3.00 6 6 0 0
............................................................................................................CAAAACATGAAGCGCTGCAAAAA................................................................ 23 2 2 3.00 6 6 0 0
........................................................................CAGCAGCAATTCATGTTTTGTAT.................................................................................................... 23 2 2 3.00 6 6 0 0
........................................................................CAGCAGCAATACATGTTTTGGA..................................................................................................... 22 1 2 3.00 6 5 1 0
........................................................................CATCAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 3.00 6 4 2 0
...............................................................................................................AACATGAAGCGCTGCAACAC................................................................ 20 0 2 3.00 6 5 1 0
........................................................................CAGCAGCAATTCATGTTTGGAA..................................................................................................... 22 2 2 3.00 6 6 0 0
.......................................................................ACAGCAGCAATTCATGTTTTGGATT................................................................................................... 25 2 2 3.00 6 6 0 0
.......................................................................ACAGCAGCCATTCATGTTTTGGA..................................................................................................... 23 2 2 3.00 6 6 0 0
........................................................................CAGAAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 3 3.00 9 9 0 0
......................................................................AGCAGCAGCAATTCATGTTTTGGAA.................................................................................................... 25 2 2 3.00 6 6 0 0
........................................................................CAGCAGCCATTCATGTTTTGG...................................................................................................... 21 1 2 3.00 6 6 0 0
........................................................................CAGCAGCAATTCACGTTTTGG...................................................................................................... 21 1 2 3.00 6 6 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACTT.............................................................. 23 2 2 3.00 6 6 0 0
........................................................................CAGCAGCTATTCATGTTTTGGA..................................................................................................... 22 1 2 3.00 6 6 0 0
........................................................................CAGCAGCAATTCACGTTTTGGAT.................................................................................................... 23 2 2 3.00 6 6 0 0
........................................................................CAGCAGCAATTCATGTTTCGGA..................................................................................................... 22 1 2 3.00 6 5 0 1
..................................................................................................................ATGAAGCGCTGCAACA................................................................. 16 0 2 3.00 6 5 1 0
........................................................................CAGCAGCAATTCATGTTTGGA...................................................................................................... 21 2 4 2.75 11 10 1 0
........................................................................TAGCAGCACTTCATGTTTTGGA..................................................................................................... 22 2 3 2.67 8 8 0 0
........................................................................AAGCAGCACTTCATGTTTTGGA..................................................................................................... 22 2 5 2.60 13 13 0 0
.......................................................................ACAGCAGCAATTCATGTTTTGAA..................................................................................................... 23 2 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTGATGTTTTGGAA.................................................................................................... 23 2 2 2.50 5 5 0 0
......................................................................TGCAGCAGCAATTCATGTTTTGGAT.................................................................................................... 25 1 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTCATGTTCTGGAA.................................................................................................... 23 2 2 2.50 5 5 0 0
........................................................................CAGCGGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 2.50 5 4 1 0
.......................................................................ACAGCAGCAATTCATGTTTTGGAG.................................................................................................... 24 1 2 2.50 5 5 0 0
.......................................................................GCAGCAGAAATTCATGTTTTGG...................................................................................................... 22 1 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTCCTGTTTTGGAA.................................................................................................... 23 2 2 2.50 5 5 0 0
......................................................................AGCAGCAGCAATTTATGTTTTGGA..................................................................................................... 24 2 2 2.50 5 5 0 0
......................................................................AGCAGCAGCAATTCATGTTTTGGT..................................................................................................... 24 2 2 2.50 5 5 0 0
............................................................................................................CAAAACATGAAGCGCTGCAACAAA............................................................... 24 2 2 2.50 5 5 0 0
.......................................................................GCAGCAGCAATTCATGTTTTGGAG.................................................................................................... 24 0 2 2.50 5 5 0 0
........................................................................CAGCAGCGATTCATGTTTTGGA..................................................................................................... 22 1 2 2.50 5 5 0 0
.......................................................................GAAGCAGCAATTCATGTTTTGGA..................................................................................................... 23 1 2 2.50 5 5 0 0
.........................................................................AGCAGCAATTCATGTTTTGGAG.................................................................................................... 22 0 2 2.50 5 5 0 0
.......................................................................GCAGCAGCAATACATGTTTTGGA..................................................................................................... 23 1 2 2.50 5 4 0 1
........................................................................CAGCAGCAATTCATGTTTTGAAT.................................................................................................... 23 2 2 2.50 5 5 0 0
.............................................................................................................AAAACATGAAGCGCTGCAACACC............................................................... 23 0 2 2.50 5 5 0 0
.......................................................................GCAGCAGCAATTCATGTTTTGAT..................................................................................................... 23 2 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTCATGCTTTGGAA.................................................................................................... 23 2 2 2.50 5 5 0 0
........................................................................CGGCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 2.50 5 1 4 0
.......................................................................GCAGCAGCAATTCATGTTTTGCA..................................................................................................... 23 1 2 2.50 5 5 0 0
.......................................................................GCAGCAGCACTTCATGTTTTGGA..................................................................................................... 23 1 2 2.50 5 5 0 0
......................................................................AGCCGCAGCAATTCATGTTTTGGA..................................................................................................... 24 2 2 2.50 5 5 0 0
.......................................................................GCAGCAGCAATTCATGTTTTGGAAA................................................................................................... 25 2 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTCATGTTTTGGATAA.................................................................................................. 25 2 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTCATTTTTTGGAA.................................................................................................... 23 2 2 2.50 5 5 0 0
......................................................................AGCAGCAGCAATTAATGTTTTGGA..................................................................................................... 24 2 2 2.50 5 5 0 0
.....................................................................AAACAGCAGCAATTCATGTTTTGGAA.................................................................................................... 26 3 2 2.50 5 5 0 0
........................................................................CAGCAGCAATTCATGTTTTGTC..................................................................................................... 22 2 3 2.33 7 6 0 1
........................................................................CAGCAGCAATTCATGTTTTGGTAA................................................................................................... 24 3 7 2.29 16 16 0 0
........................................................................TAGCAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 4 2.25 9 9 0 0
........................................................................CAGCAGCAATTCATGTTCTGGA..................................................................................................... 22 1 2 2.00 4 4 0 0
........................................................................CAGCAGCAATTCATCTTTTGGAA.................................................................................................... 23 2 2 2.00 4 3 1 0
............................................................................................................CAAAACATGAAGCGCTGCAATT................................................................. 22 2 3 2.00 6 2 0 4
............................................................................AGCAATTCATGTTTTGGAA.................................................................................................... 19 1 6 2.00 12 12 0 0
........................................................................CAGCAGCAATTCATGTTTTGGAAGA.................................................................................................. 25 2 2 2.00 4 4 0 0
.......................................................................GCAGCAGCAATTCTTGTTTTGGA..................................................................................................... 23 1 2 2.00 4 4 0 0
........................................................................CAGCAGCAATGCATGTTTTGGA..................................................................................................... 22 1 2 2.00 4 1 3 0
.......................................................................GCAGCAGAAATTCATGTTTTGGA..................................................................................................... 23 1 2 2.00 4 3 1 0
.......................................................................GCAGCAGCAATTCTTGTTTTGG...................................................................................................... 22 1 2 2.00 4 4 0 0
........................................................................CCGCAGCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 2.00 4 4 0 0
.........................................................................AGCAGCACTTCATGTTTTGGA..................................................................................................... 21 1 2 2.00 4 4 0 0
............................................................................AGCAATTCATGTTTTGG...................................................................................................... 17 0 3 2.00 6 5 1 0
........................................................................CAGCAGCAATTCATGTTTTGGACA................................................................................................... 24 2 3 2.00 6 6 0 0
........................................................................CAGCAGCAATTTATGTTTTGGAT.................................................................................................... 23 2 2 2.00 4 4 0 0
........................................................................CAGCAGCAATTAATGTTTTGGAG.................................................................................................... 23 1 2 2.00 4 4 0 0
......................................................................TGCAGCAGCAATTCATGTTTTGTA..................................................................................................... 24 1 2 2.00 4 4 0 0
........................................................................CAGCACCAATTCATGTTTTGGA..................................................................................................... 22 1 2 2.00 4 4 0 0
.......................................................................GCAGCAGCAATTCATGTTTTGGG..................................................................................................... 23 1 2 2.00 4 4 0 0
.......................................................................ACAGCAGCAATTCTTGTTTTGGA..................................................................................................... 23 2 2 2.00 4 4 0 0
........................................................................CTGCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 2.00 4 1 3 0
........................................................................CAGCAGCAATTTATGTTTTGG...................................................................................................... 21 1 2 2.00 4 3 1 0
........................................................................CAGCAGCAATTCATGTTTTGGATAT.................................................................................................. 25 3 2 2.00 4 4 0 0
........................................................................CAGGAGCACTTCATGTTTTGGA..................................................................................................... 22 2 2 2.00 4 4 0 0
.........................................................................AGCAGCAATTCATATTTTGGA..................................................................................................... 21 1 2 2.00 4 3 0 1
........................................................................CAGCAGCAATTAATGTTTTGGAC.................................................................................................... 23 2 2 2.00 4 4 0 0
......................................................................TGCAGCAGCAATTCATGTTTT........................................................................................................ 21 0 2 2.00 4 4 0 0
........................................................................CAGCAGCAATTCATGTTTTAGA..................................................................................................... 22 1 3 2.00 6 6 0 0
........................................................................CAGCAGCAGTTCATGTTTTGGAT.................................................................................................... 23 2 2 2.00 4 4 0 0
........................................................................CAGAAGCAATTCATGTTTTGG...................................................................................................... 21 1 2 2.00 4 4 0 0
........................................................................CAGCAGCAATTCATGTT.......................................................................................................... 17 0 2 2.00 4 3 1 0
........................................................................GAGCAGCAATTCATGTTTTGGA..................................................................................................... 22 1 2 2.00 4 4 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACTTT............................................................. 24 3 2 2.00 4 4 0 0
........................................................................CAGCAGCAATTCATGGTTTGGA..................................................................................................... 22 1 2 2.00 4 2 2 0
......................................................................AGCAGCAGCAATTCATGTTTTAGA..................................................................................................... 24 2 3 2.00 6 6 0 0
.......................................................................GCAGCAGCCATTCATGTTTTGAA..................................................................................................... 23 2 2 2.00 4 4 0 0
........................................................................CAGCAGCAATTCAAGTTTTGGAT.................................................................................................... 23 2 5 1.80 9 9 0 0
.......................................................................ACAGCAGCAATTCCTGTTTTGGAA.................................................................................................... 24 3 4 1.75 7 7 0 0
........................................................................CAGCAGCCATTCATGTTTTGGAT.................................................................................................... 23 2 3 1.67 5 5 0 0
............................................................................................................CAAAACATGAAGCGCTGCAACT................................................................. 22 1 3 1.67 5 5 0 0
.......................................................................GCAGCAGCCATTCATGTTTTGGAA.................................................................................................... 24 2 2 1.50 3 3 0 0
........................................................................CAGCAGCAATTCATGTTTTGGCG.................................................................................................... 23 1 2 1.50 3 3 0 0
.........................................................................AGCAGCAATTAATGTTTTGGA..................................................................................................... 21 1 2 1.50 3 3 0 0
.......................................................................GCAGCAGCAGTTCATGTTTTGGA..................................................................................................... 23 1 2 1.50 3 3 0 0
............................................................................................................CAAAACATGAAGCGCTGCAACATT............................................................... 24 2 2 1.50 3 3 0 0
........................................................................CAGCAGCAATTCATCTTTTGG...................................................................................................... 21 1 2 1.50 3 2 1 0
........................................................................CAGCAGCCATTCATGTTTTG....................................................................................................... 20 1 4 1.50 6 5 0 1
........................................................................CAGCAGCAATTCCTGTTTTGGAT.................................................................................................... 23 2 2 1.50 3 3 0 0
........................................................................CAGCAGCAATTAATCTTTTGGA..................................................................................................... 22 2 2 1.50 3 3 0 0
.......................................................................ACAGCAGCACTTCATGTTTTGGA..................................................................................................... 23 2 2 1.50 3 3 0 0
......................................................................TGCAGCAGCAATTCATGTTTTGAA..................................................................................................... 24 1 2 1.50 3 3 0 0
......................................................................AGCAGCAGCAATTCATGTTTTCGA..................................................................................................... 24 2 2 1.50 3 3 0 0
.............................................................................................................AAAACATGAAGCGCTGCAAAA................................................................. 21 1 2 1.50 3 3 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACCA.............................................................. 23 1 2 1.50 3 3 0 0
........................................................................CAGCAGCAATTCATGTTTTGGGT.................................................................................................... 23 2 2 1.50 3 3 0 0
.........................................................................AGCCGCAATTCATGTTTTGGAA.................................................................................................... 22 2 2 1.50 3 3 0 0
.......................................................................GCCGCAGCAATTCATGTTTTGGA..................................................................................................... 23 1 2 1.50 3 3 0 0
...........................................................................................................ACAAAACATGAAGCGCTGCAACA................................................................. 23 1 2 1.50 3 3 0 0
........................................................................CAGCATCAATTCATGTTTTGGAA.................................................................................................... 23 2 2 1.50 3 3 0 0
..............................................................................................................AAACATGAAGCGCTGCAACACCTT............................................................. 24 2 2 1.50 3 3 0 0
.......................................................................CCAGCAGCCATTCATGTTTTGGA..................................................................................................... 23 2 2 1.50 3 3 0 0

Anti-sense strand reads

GATGAGTGTCTCTGAAAGAAGTAAGCGTCCATGGGGTCTCGCCGGGGGTGGGAGCGACTGAGGCTTCCCTACGTCGTCGTTAAGTACAAAACCTCATAACGGTTCCAAGTTTTGTACTTCGCGACGTTGTGGGGAAGCACCCTTTATCTCTCCACCCCAGGACGTGTTGTCTGGACACACCCAAGATGATTTCGT
*************************************************..((((((((((.((..(((((..(((((((((((((............)))))))))))))..)))))..)).))))))).)))....********************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:53 PM