ID:

rno-mir-320

Coordinate:

chr15:52134276-52134357 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-54.9

Sense Strand Reads

GGAAGTGACATCAAGGGGGCGTGATCGGACCATAGTATTTATCAGACGGTGCCTCGCTGTCCTCCGCCTTCTCTTCCCGGTTCTTCCCGGAGTCGGGAAAAGCTGGGTTGAGAGGGCGAAAAAGGATATGGGAGTGGATTCTGAACTGTGCGGGGGTGTGACTCGTGGGGGTGTGTCTCTGC
***********************************......(((((...(((((((.((((((.(((((((((..(((((((.((((((....)))))).)))))))..)))))))))....)))))))))).)))...)))))...***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528818
Adult_testes_Mili_IP
GSM1528817
Adult_testes
.................................................................................................AAAAGCTGGGTTGAGAGGGCGA............................................................... 22 0 1 3788.00 3788 3740 20 28
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAA.............................................................. 23 0 1 3060.00 3060 3035 11 14
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAT............................................................. 24 1 1 2866.00 2866 2848 8 10
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAA............................................................. 24 0 1 2580.00 2580 2566 9 5
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAT.............................................................. 23 1 1 2547.00 2547 2519 21 7
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATT............................................................. 24 2 1 1009.00 1009 1008 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAT............................................................ 25 1 1 541.00 541 539 1 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAA............................................................ 25 0 1 525.00 525 523 1 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATA............................................................. 24 1 1 452.00 452 452 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGT............................................................... 22 1 1 381.00 381 381 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAT............................................................ 25 2 1 307.00 307 306 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATT............................................................ 25 2 1 251.00 251 247 3 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGA............................................................. 24 1 1 220.00 220 220 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAA............................................................ 25 1 1 219.00 219 219 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTT............................................................. 24 3 1 195.00 195 194 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAG............................................................. 24 1 1 193.00 193 193 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAA............................................................. 24 1 1 187.00 187 187 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAA............................................................. 23 0 1 187.00 187 187 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAT............................................................. 24 2 1 181.00 181 181 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGT............................................................. 24 2 1 174.00 174 174 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGA............................................................... 23 0 1 167.00 167 166 1 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGA............................................................... 21 0 1 164.00 164 164 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAT............................................................. 23 1 1 155.00 155 155 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAGT............................................................ 25 2 1 139.00 139 139 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTT............................................................ 25 3 2 119.00 238 237 0 1
..................................................................................................AAAGCTGGGTTGAGAGGGCGAA.............................................................. 22 0 1 116.00 116 116 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTT.............................................................. 23 2 1 114.00 114 114 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAT.............................................................. 22 1 1 110.00 110 109 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCG................................................................ 21 0 1 108.00 108 106 1 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAAA........................................................... 26 0 1 90.00 90 90 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGA............................................................... 23 1 1 88.00 88 87 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTAT........................................................... 26 3 1 86.00 86 86 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAAT........................................................... 26 1 1 84.00 84 84 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATTT........................................................... 26 3 1 84.00 84 83 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTA............................................................. 24 2 1 78.00 78 77 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTA.............................................................. 23 1 1 76.00 76 76 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTA............................................................ 25 2 1 73.00 73 73 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAGA............................................................ 25 1 1 71.00 71 71 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTAT............................................................ 25 3 1 69.00 69 68 0 1
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAAA............................................................. 25 1 1 69.00 69 69 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAAT............................................................. 25 2 1 69.00 69 69 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAA.............................................................. 24 1 1 66.00 66 66 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAT.............................................................. 24 2 1 65.00 65 65 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAG.............................................................. 23 1 1 65.00 65 65 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATA............................................................ 25 1 1 61.00 61 56 5 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAAT............................................................ 24 1 1 57.00 57 57 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAAA............................................................ 24 0 1 55.00 55 55 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCAT............................................................. 24 2 1 53.00 53 53 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATAT........................................................... 26 2 1 52.00 52 52 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAAT........................................................... 26 2 1 49.00 49 49 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGC............................................................... 22 1 1 49.00 49 49 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGAT.............................................................. 24 1 1 47.00 47 47 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATT............................................................. 23 2 1 43.00 43 43 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAAA........................................................... 26 1 1 43.00 43 41 2 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAAA............................................................. 22 0 1 42.00 42 42 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAA.............................................................. 23 1 1 42.00 42 42 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAAT............................................................ 25 2 1 41.00 41 41 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTAA........................................................... 26 2 1 40.00 40 40 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAAA............................................................. 24 1 1 40.00 40 40 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGT............................................................... 23 1 1 39.00 39 33 6 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAAT............................................................. 22 1 1 39.00 39 39 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGA............................................................... 22 1 1 37.00 37 37 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCA.............................................................. 23 1 1 37.00 37 37 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGA............................................................... 22 1 1 36.00 36 36 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCT.............................................................. 23 2 1 35.00 35 35 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAAA............................................................ 25 1 1 35.00 35 35 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAT.............................................................. 23 2 1 34.00 34 33 1 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAA............................................................... 22 1 1 34.00 34 34 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTAA............................................................ 25 2 1 33.00 33 33 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCAA............................................................. 24 1 1 31.00 31 31 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAG............................................................ 25 1 1 31.00 31 31 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATA............................................................. 23 1 1 31.00 31 31 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATAA........................................................... 26 1 1 30.00 30 30 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAAT............................................................. 24 2 1 30.00 30 30 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATAT............................................................ 24 2 1 29.00 29 28 0 1
.................................................................................................AAACGCTGGGTTGAGAGGGCGAA.............................................................. 23 1 1 28.00 28 28 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAC............................................................. 24 1 1 26.00 26 26 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAATT........................................................... 26 2 1 25.00 25 25 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAAT.............................................................. 23 2 1 24.00 24 24 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCTAT.............................................................. 23 2 1 24.00 24 24 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGATT............................................................. 25 3 1 24.00 24 24 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGAA............................................................ 25 1 1 23.00 23 23 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGG............................................................... 22 1 1 23.00 23 23 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATAA............................................................ 24 1 1 23.00 23 23 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAGA........................................................... 26 1 1 23.00 23 23 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGAAT............................................................. 24 2 1 22.00 22 22 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATGT............................................................ 25 3 1 21.00 21 21 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCTT............................................................. 24 3 1 20.00 20 20 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTTA........................................................... 26 3 1 20.00 20 20 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGAT.............................................................. 23 2 1 20.00 20 20 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATATT........................................................... 26 3 1 20.00 20 20 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAT.............................................................. 21 1 1 20.00 20 20 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAAAA............................................................. 24 1 1 20.00 20 20 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATG............................................................. 24 2 1 19.00 19 19 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGAAA............................................................. 24 1 1 19.00 19 19 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAGT........................................................... 26 2 1 19.00 19 19 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCG................................................................ 22 0 1 19.00 19 19 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAAAT............................................................ 23 1 1 18.00 18 14 4 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCAAT............................................................ 25 2 1 18.00 18 18 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATGA............................................................ 25 2 1 18.00 18 18 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGGAT............................................................. 24 2 1 18.00 18 18 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAC.............................................................. 23 1 1 17.00 17 17 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAAAA.......................................................... 27 1 1 17.00 17 17 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATTA........................................................... 26 2 1 16.00 16 16 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAA.............................................................. 21 0 1 16.00 16 16 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGGA.............................................................. 23 1 1 16.00 16 16 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAAAT.......................................................... 27 1 1 15.00 15 15 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAGA............................................................. 23 1 1 15.00 15 15 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAAA.............................................................. 23 1 1 14.00 14 14 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGATAT............................................................ 26 3 1 14.00 14 14 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAG............................................................ 25 2 1 14.00 14 14 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGAA.............................................................. 24 0 1 14.00 14 14 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAG............................................................. 23 1 1 14.00 14 14 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAAAA............................................................ 23 0 1 14.00 14 14 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAAAA........................................................... 25 0 1 14.00 14 13 1 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGGAA............................................................. 24 1 1 13.00 13 12 1 0
.................................................................................................AAAAGCTGGGTCGAGAGGGCGA............................................................... 22 1 1 13.00 13 13 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGTAT........................................................... 26 3 1 13.00 13 13 0 0
.................................................................................................AAAAGCTGGGTTGTGAGGGCGAAT............................................................. 24 2 1 13.00 13 13 0 0
.................................................................................................AAAAGCTGGGGTGAGAGGGCGA............................................................... 22 1 1 13.00 13 13 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAG............................................................. 24 2 1 13.00 13 13 0 0
.................................................................................................AAAAGCTGGGTAGAGAGGGCGA............................................................... 22 1 1 13.00 13 13 0 0
.................................................................................................AAAAGCTGGGCTGAGAGGGCGA............................................................... 22 1 1 12.00 12 11 1 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGT............................................................... 21 1 1 12.00 12 12 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTAAA........................................................... 26 2 1 12.00 12 12 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTGA............................................................. 24 2 1 12.00 12 12 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGATT............................................................. 24 3 1 12.00 12 12 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGTAA............................................................. 23 1 1 12.00 12 12 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAAAT............................................................. 24 2 1 11.00 11 11 0 0
.................................................................................................AAAAGCTGGGATGAGAGGGCGA............................................................... 22 1 1 11.00 11 11 0 0
.................................................................................................AAAAGCTGGGCTGAGAGGGCGAT.............................................................. 23 2 1 11.00 11 10 1 0
.................................................................................................AAAAGCTGGGTTGAGAGGACGAAA............................................................. 24 1 1 11.00 11 11 0 0
.................................................................................................AAAAGCTGGGTTGTGAGGGCGA............................................................... 22 1 1 11.00 11 11 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGAAA............................................................. 25 0 1 11.00 11 11 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATAAT........................................................... 25 2 1 10.00 10 10 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAAAT............................................................ 25 2 1 10.00 10 10 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGAT............................................................ 25 2 1 10.00 10 10 0 0
.................................................................................................AAAAGCTGGGCTGAGAGGGCGAA.............................................................. 23 1 1 10.00 10 10 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAAAA............................................................ 26 1 1 10.00 10 10 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATT............................................................ 24 2 1 10.00 10 10 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAGA............................................................ 24 1 1 10.00 10 10 0 0
.................................................................................................AAAAGCTGGGCTGAGAGGGCGAAA............................................................. 24 1 1 10.00 10 10 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGTAA........................................................... 26 2 1 9.00 9 9 0 0
.................................................................................................CAACGCTGGGTTGAGAGGGCGA............................................................... 22 2 1 9.00 9 9 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGAAT............................................................. 25 1 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCAAA............................................................ 25 1 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGTGAGGGCGAA.............................................................. 23 1 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGATGAGAGGGCGAAA............................................................. 24 1 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGGT.............................................................. 23 2 1 9.00 9 9 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAGT............................................................ 24 2 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGACGAAT............................................................. 24 2 1 9.00 9 9 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGATA............................................................. 25 2 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCTA............................................................. 24 2 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAATTT.......................................................... 27 3 1 9.00 9 9 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATGT........................................................... 26 3 1 8.00 8 8 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATAT........................................................... 25 2 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCTAA.............................................................. 23 1 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGGTGAGAGGGCGAT.............................................................. 23 2 1 8.00 8 7 0 1
.................................................................................................AAAAGCTGGGATGAGAGGGCGAT.............................................................. 23 2 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCTAT............................................................ 25 3 1 8.00 8 8 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAGT............................................................. 23 2 1 8.00 8 8 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGATAT............................................................ 23 2 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAAAT.......................................................... 27 2 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCTTAA............................................................. 24 2 1 8.00 8 8 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAATT............................................................ 26 3 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGC................................................................. 20 0 1 8.00 8 7 0 1
................................................................................................AAAAAGCTGGGTTGAGAGGGCGATAA............................................................ 26 2 1 8.00 8 8 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATTAT.......................................................... 27 3 1 8.00 8 8 0 0
...............................................................................................AAAAAAGCTGGGTTGAGAGGGCGA............................................................... 24 2 1 8.00 8 8 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGA............................................................... 20 0 1 8.00 8 7 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGAAA........................................................... 26 1 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTTA............................................................ 25 3 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGACT............................................................. 24 2 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGGGAGGGCGA............................................................... 22 1 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTTAAT........................................................... 26 3 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCTTAAA............................................................ 25 2 1 7.00 7 7 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGATT............................................................. 22 2 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGCCGAT.............................................................. 23 2 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAT............................................................... 22 2 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGAAAAA............................................................. 24 2 1 7.00 7 7 0 0
......................................................................................................CTGGGTTGAGAGGGCGA............................................................... 17 0 1 7.00 7 5 0 2
.................................................................................................AAAAGCTGGGGTGAGAGGGCGAAA............................................................. 24 1 1 7.00 7 7 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATA............................................................ 24 1 1 7.00 7 7 0 0
....................................................................................................AGCTGGGTTGAGAGGGCGAA.............................................................. 20 0 1 7.00 7 7 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGTAA............................................................. 25 2 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAACT............................................................ 25 2 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTAAT.......................................................... 27 3 1 7.00 7 7 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAAAT........................................................... 25 1 1 7.00 7 7 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGACA............................................................. 24 1 1 6.00 6 6 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGTAT............................................................. 23 2 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAC............................................................ 25 1 1 6.00 6 6 0 0
.................................................................................................AACAGCTGGGTTGAGAGGGCGAAA............................................................. 24 1 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCC.............................................................. 23 2 1 6.00 6 6 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGAAAA............................................................ 25 1 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTATT............................................................ 25 3 1 6.00 6 6 0 0
.................................................................................................AACCGCTGGGTTGAGAGGGCGA............................................................... 22 2 1 6.00 6 6 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAAG............................................................. 25 2 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGA................................................................. 20 1 1 6.00 6 6 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATTT........................................................... 25 3 1 6.00 6 4 2 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGTT.............................................................. 24 2 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGGGAGGGCGAA.............................................................. 23 1 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGGTGAGAGGGCGAAT............................................................. 24 2 1 6.00 6 6 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAAGT............................................................ 26 3 1 6.00 6 6 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAATAT........................................................... 24 2 1 6.00 6 6 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCAA............................................................... 21 1 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGTGAGGGCGAT.............................................................. 23 2 1 6.00 6 6 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAG.............................................................. 22 1 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCTTA............................................................ 25 3 1 6.00 6 6 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGTAT............................................................. 25 3 1 6.00 6 6 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGATT............................................................. 24 3 1 6.00 6 6 0 0
...............................................................................................AAAAAAGCTGGGTTGAGAGGGCGAAA............................................................. 26 2 1 6.00 6 6 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAGAT............................................................ 24 2 1 6.00 6 6 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGTAA............................................................... 22 2 3 6.00 18 18 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAGA............................................................. 24 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAAAGGGCGAA.............................................................. 23 1 1 5.00 5 5 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGAAAT............................................................ 26 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAAAA............................................................ 25 1 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGGTGAGAGGGCGAA.............................................................. 23 1 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATAAT.......................................................... 27 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAATAT.......................................................... 27 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAGT............................................................ 25 3 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGGGAGGGCGAAT............................................................. 24 2 1 5.00 5 5 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATAAAT.......................................................... 26 2 1 5.00 5 5 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGAGT............................................................. 25 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGG.................................................................. 19 0 1 5.00 5 4 0 1
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAAAA........................................................... 26 1 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCGT............................................................. 24 3 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAGTT............................................................ 25 3 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAAGA............................................................. 24 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAAGA.......................................................... 27 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAGA............................................................ 25 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAATT.......................................................... 27 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGATGAGAGGGCGAAT............................................................. 24 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGAGTTGAGAGGGCGA............................................................... 22 1 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGATA............................................................. 24 2 1 5.00 5 5 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAAG............................................................. 22 1 1 5.00 5 5 0 0
.................................................................................................AAAAGCCGGGTTGAGAGGGCGA............................................................... 22 1 1 5.00 5 2 0 3
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAAAA.......................................................... 27 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAATAAA.......................................................... 27 2 1 5.00 5 5 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAAG........................................................... 26 2 1 5.00 5 5 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGTT.............................................................. 24 3 1 5.00 5 5 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGATT............................................................. 25 2 1 4.00 4 4 0 0
.................................................................................................AAACGCTGGGTTGCGAGGGCGAAC............................................................. 24 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATATA........................................................... 26 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGGAAT............................................................ 25 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGCGGGCGAT.............................................................. 23 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTCGAGAGGGCGATT............................................................. 24 3 1 4.00 4 4 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCG................................................................ 20 0 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGACGA............................................................... 22 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGACAGGGCGAA.............................................................. 23 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTAGAGAGGGCGAAA............................................................. 24 1 1 4.00 4 4 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAAATT........................................................... 25 2 1 4.00 4 4 0 0
.................................................................................................CAACGCTGGGTTGAGAGGGCGAA.............................................................. 23 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGGGAGGGCGAAA............................................................. 24 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGACGAA.............................................................. 23 1 1 4.00 4 4 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAAC............................................................. 22 1 1 4.00 4 4 0 0
.................................................................................................AAATGCTGGGTTGAGAGGGCGAT.............................................................. 23 2 1 4.00 4 4 0 0
...................................................................................................AAGCTGGGTTGAGAGGGCGAATTT........................................................... 24 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTAGGTTGAGAGGGCGA............................................................... 22 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGCCGAAA............................................................. 24 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGG................................................................... 18 0 1 4.00 4 3 0 1
................................................................................................GAAAAGCTGGGTTGAGAGGGCTAT.............................................................. 24 2 1 4.00 4 4 0 0
.................................................................................................TAACGCTGGGTTGAGAGGGCGA............................................................... 22 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAAAGGGCGAT.............................................................. 23 2 1 4.00 4 4 0 0
.....................................................................................................GCTGGGTTGAGAGGGCGA............................................................... 18 0 1 4.00 4 4 0 0
.................................................................................................ACAAGCTGGGTTGAGAGGGCGAA.............................................................. 23 1 1 4.00 4 4 0 0
.................................................................................................CAAAGCTGGGTTGAGAGGGCGAAA............................................................. 24 1 1 4.00 4 4 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATAA........................................................... 25 1 1 4.00 4 4 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGATATT........................................................... 25 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGGGAGGGCGAT.............................................................. 23 2 1 4.00 4 4 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAGTAT........................................................... 25 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAGTT........................................................... 26 3 1 4.00 4 4 0 0
................................................................................................AAAAAGCTGGGTTGAGAGGGCGT............................................................... 23 2 1 4.00 4 4 0 0
...............................................................................................AAAAAAGCTGGGTTGAGAGGGCGAT.............................................................. 25 3 1 4.00 4 4 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATAAT.......................................................... 26 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAAAC........................................................... 26 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATATAT.......................................................... 27 3 1 4.00 4 4 0 0
.................................................................................................CAAAGCTGGGTTGAGAGGGCGA............................................................... 22 1 1 4.00 4 4 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGTA.............................................................. 24 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCAGT............................................................ 25 3 1 4.00 4 4 0 0
.................................................................................................AAACGCTGGGTTGAGAGGGCGTAA............................................................. 24 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATGTA........................................................... 26 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGAAAA.............................................................. 23 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTCGAGAGGGCGAAA............................................................. 24 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGTAAAT........................................................... 26 2 1 4.00 4 4 0 0
.................................................................................................AAAAGATGGGTTGAGAGGGCGAAA............................................................. 24 1 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATTAAA.......................................................... 27 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGAAGTAT.......................................................... 27 3 1 4.00 4 4 0 0
................................................................................................GAAAAGCTGGGTTGAGAGGGCGTAT............................................................. 25 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGATAATT.......................................................... 27 3 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCAATA............................................................. 24 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAAAGGGCGAAT............................................................. 24 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTAGAGAGGGCGATA............................................................. 24 2 1 4.00 4 4 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGAAA............................................................... 22 2 9 3.56 32 32 0 0
.................................................................................................AAATGCTGGGTTGAGAGGGCGA............................................................... 22 1 1 3.00 3 3 0 0
.................................................................................................AAGCGCTGGGTTGCGAGGGCGAA.............................................................. 23 3 1 3.00 3 3 0 0
..................................................................................................AAAGCTGGGTTGAGAGGGCGAATTA........................................................... 25 2 1 3.00 3 3 0 0
.................................................................................................AAAAGCTGGGTTGAGAGGGCGCTTAA........................................................... 26 3 1 3.00 3 3 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGAAGT............................................................ 25 3 1 3.00 3 3 0 0
.................................................................................................AAAAGCTGGGTTGCGAGGGCGATAA............................................................ 25 2 1 3.00 3 3 0 0
.................................................................................................AAAAGCTGGGTAGAGAGGGCGAA.............................................................. 23 1 1 3.00 3 3 0 0

Anti-sense strand reads

CCTTCACTGTAGTTCCCCCGCACTAGCCTGGTATCATAAATAGTCTGCCACGGAGCGACAGGAGGCGGAAGAGAAGGGCCAAGAAGGGCCTCAGCCCTTTTCGACCCAACTCTCCCGCTTTTTCCTATACCCTCACCTAAGACTTGACACGCCCCCACACTGAGCACCCCCACACAGAGACG
***********************************......(((((...(((((((.((((((.(((((((((..(((((((.((((((....)))))).)))))))..)))))))))....)))))))))).)))...)))))...***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM