ID:

rno-mir-31a

 Coordinate:

chr5:107206515-107206620 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-39.4 -39.4 -39.2

Sense Strand Reads

AGGTGGAAGGAGAGATTGTGGAAAAGTAAAACAACAAAGAGGCGTGGTATTGCTCCTGAAACTTGGAACTGGAGAGGAGGCAAGATGCTGGCATAGCTGTTGAACTGAGAACCTGCTATGCCAACATATTGCCATCTTTCCTGTCTGACAGCAGCTTGGCCACCTCCATGCCATTCCTCCGTGTCCTGCTACAAGCAGTACGTGAT
**************************************************************((((.((.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).))))))...******************************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.............................................................................AGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 23 0 1 3343.00 3343 3310 31 2
.............................................................................AGGCAAGATGCTGGCATAGCTGA.......................................................................................................... 23 1 1 1040.00 1040 1039 1 0
.............................................................................AGGCAAGATGCTGGCATAGCTG........................................................................................................... 22 0 1 545.00 545 541 4 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAA........................................................................................................ 25 2 1 326.00 326 324 2 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTA......................................................................................................... 24 1 1 226.00 226 226 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTT......................................................................................................... 24 0 1 224.00 224 220 4 0
.............................................................................AGGCAAGATGCTGGCATAGCT............................................................................................................ 21 0 1 167.00 167 157 10 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAT........................................................................................................ 25 2 1 145.00 145 145 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAA......................................................................................................... 24 2 1 113.00 113 113 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTAA.......................................................................................................... 23 2 1 105.00 105 105 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTT........................................................................................................ 25 1 1 86.00 86 85 1 0
.................................................................................................................TGCTATGCCAACATATTGCCATC...................................................................... 23 0 1 85.00 85 80 5 0
.............................................................................AGGCAAGATGCTGGCATAGCTAT.......................................................................................................... 23 1 1 67.00 67 67 0 0
.................................................................................................................TGCTATGCCAACATATTGCCAT....................................................................... 22 0 1 66.00 66 65 1 0
.................................................................................................................TGCTATGCCAACATATTGCCA........................................................................ 21 0 1 60.00 60 60 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGT.......................................................................................................... 22 0 1 56.00 56 56 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTA........................................................................................................... 22 1 1 51.00 51 51 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATCA..................................................................... 24 1 1 45.00 45 45 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 24 1 1 43.00 43 42 1 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTA........................................................................................................ 25 1 1 42.00 42 42 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATA...................................................................... 23 1 1 42.00 42 42 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAT......................................................................................................... 24 1 1 37.00 37 37 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTT........................................................................................................... 22 1 1 36.00 36 33 3 0
.................................................................................................................TGCTATGCCAACATATTGCCATCT..................................................................... 24 0 1 29.00 29 29 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAAA....................................................................................................... 26 2 1 24.00 24 23 1 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTAT....................................................................................................... 26 2 1 20.00 20 20 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTTA.......................................................................................................... 23 2 1 18.00 18 18 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGA.......................................................................................................... 22 1 1 17.00 17 17 0 0
.............................................................................AGGCAAGATGATGGCATAGCTGT.......................................................................................................... 23 1 1 17.00 17 17 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAAT....................................................................................................... 26 3 1 16.00 16 16 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGG.......................................................................................................... 23 1 1 15.00 15 15 0 0
.............................................................................AGGCAAGATGCTGGCATAG.............................................................................................................. 19 0 1 15.00 15 15 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATAA..................................................................... 24 2 1 15.00 15 15 0 0
.............................................................................AGGCAAGATGCTGACATAGCTGT.......................................................................................................... 23 1 1 14.00 14 14 0 0
.............................................................................AGGAAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 14.00 14 14 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATT...................................................................... 23 1 1 13.00 13 12 1 0
..............................................................................GGCAAGATGCTGGCATAGCTG........................................................................................................... 21 0 1 13.00 13 13 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTCT.......................................................................................................... 23 1 1 12.00 12 12 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTA......................................................................................................... 23 1 1 12.00 12 12 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGC.......................................................................................................... 23 1 1 11.00 11 11 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAAT........................................................................................................ 25 3 1 11.00 11 11 0 0
.............................................................................AGGCAAGATGCAGGCATAGCTGT.......................................................................................................... 23 1 1 10.00 10 10 0 0
.............................................................................CGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 10.00 10 10 0 0
...............................................................................GCAAGATGCTGGCATAGCTGT.......................................................................................................... 21 0 1 10.00 10 10 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTAA........................................................................................................ 24 2 1 10.00 10 10 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTTT.......................................................................................................... 23 1 1 10.00 10 9 1 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAG........................................................................................................ 25 1 1 10.00 10 10 0 0
.............................................................................AGGCAAGATGCTGGAATAGCTGT.......................................................................................................... 23 1 1 10.00 10 10 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTGT........................................................................................................ 25 2 1 10.00 10 10 0 0
.............................................................................AGGCAAGATGCTGGCATAGC............................................................................................................. 20 0 1 9.00 9 9 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTGA........................................................................................................ 25 2 1 9.00 9 9 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTT......................................................................................................... 23 0 1 9.00 9 9 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTAAA......................................................................................................... 24 3 4 8.50 34 33 0 1
.............................................................................AGGCAAGATGCTGGCATAGCTGTAAAA...................................................................................................... 27 2 1 8.00 8 8 0 0
.............................................................................AGGCAAGATGCCGGCATAGCTGT.......................................................................................................... 23 1 1 8.00 8 8 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTAAT...................................................................................................... 27 2 1 8.00 8 8 0 0
.............................................................................AGGAAAGATGCTGGCATAGCTGA.......................................................................................................... 23 2 1 8.00 8 8 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAAA........................................................................................................ 25 3 8 7.13 57 57 0 0
.............................................................................AGGCAAGATGCTGCCATAGCTGT.......................................................................................................... 23 1 1 7.00 7 7 0 0
.............................................................................AGGCAAGATGCTGGCATAGA............................................................................................................. 20 1 1 7.00 7 7 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTAA....................................................................................................... 26 1 1 6.00 6 6 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGA.......................................................................................................... 24 2 1 6.00 6 6 0 0
.............................................................................AGGCAAGATGTTGGCATAGCTGT.......................................................................................................... 23 1 1 6.00 6 6 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTG........................................................................................................... 23 1 1 5.00 5 5 0 0
..........................................................................AAAAGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 26 2 1 5.00 5 5 0 0
.................................................................................................................TGCTATGCCAACATATTGCCAAA...................................................................... 23 2 1 5.00 5 5 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAAAA....................................................................................................... 26 3 1 5.00 5 4 1 0
.............................................................................AGGTAAGATGCTGGCATAGCTGA.......................................................................................................... 23 2 1 4.00 4 4 0 0
.............................................................................AGGCAAGAAGCTGGCATAGCTGT.......................................................................................................... 23 1 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTATA......................................................................................................... 24 2 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAAAT...................................................................................................... 27 3 1 4.00 4 4 0 0
.............................................................................AGGCAAGATACTGGCATAGCTGT.......................................................................................................... 23 1 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCACAGCTGT.......................................................................................................... 23 1 1 4.00 4 3 1 0
............................................................................AAGGCAAGATGCTGGCATAGCTGTAA........................................................................................................ 26 3 1 4.00 4 4 0 0
.............................................................................AGGCAAGCTGCTGGCATAGCTGT.......................................................................................................... 23 1 1 4.00 4 3 1 0
.............................................................................AGGCAAGATGCTGGCATAGCTGATA........................................................................................................ 25 2 1 4.00 4 4 0 0
.............................................................................AGGTAAGATGCTGGCATAGCTGTAA........................................................................................................ 25 3 1 4.00 4 4 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGAA......................................................................................................... 23 2 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTG......................................................................................................... 24 1 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGGTGGCATAGCTGT.......................................................................................................... 23 1 1 4.00 4 4 0 0
.................................................................................................................TGCTATGCCAACATATTGCC......................................................................... 20 0 1 4.00 4 4 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGTAT........................................................................................................ 26 3 1 4.00 4 4 0 0
.............................................................................TGGCAAGATGCTGGCATAGCTG........................................................................................................... 22 1 1 4.00 4 4 0 0
.............................................................................TGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAACTGT.......................................................................................................... 23 1 1 4.00 4 4 0 0
.............................................................................AGACAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGGA......................................................................................................... 24 2 1 4.00 4 4 0 0
..................................................................................................................GCTATGCCAACATATTGCCATCA..................................................................... 23 1 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGACATAGCTGA.......................................................................................................... 23 2 1 4.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCAA........................................................................................................... 22 2 3 3.67 11 11 0 0
.................................................................................................................TGCTATGCCAACATATTGC.......................................................................... 19 0 1 3.00 3 3 0 0
...........................................................................AAAGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 25 2 1 3.00 3 3 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTTTAA........................................................................................................ 25 3 1 3.00 3 3 0 0
.............................................................................AGGCAGGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGGT......................................................................................................... 24 1 1 3.00 3 3 0 0
.............................................................................AGTCAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATTT..................................................................... 24 1 1 3.00 3 3 0 0
.............................................................................AGGCAAGATGTTGGCATAGCTGA.......................................................................................................... 23 2 1 3.00 3 2 1 0
.............................................................................AGGTAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
..................................................................................................................GCTATGCCAACATATTGCCATC...................................................................... 22 0 1 3.00 3 3 0 0
.............................................................................AGGCAAGAGGCTGGCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
.............................................................................AGGCAAGATGCTGTCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 2 1 0
.............................................................................AGGCAAGATGCTGGGATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
.............................................................................AGCCAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
............................................................................AAGGCAAGATGCTGGCATCGCTGT.......................................................................................................... 24 2 1 3.00 3 3 0 0
..................................................................................................................GCTATGCCAACATATTGCCAT....................................................................... 21 0 1 3.00 3 3 0 0
.............................................................................AGGCCAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 3.00 3 3 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTTT........................................................................................................ 24 1 1 3.00 3 3 0 0
..............................................................................GGCAAGATGCTGGCATAGCT............................................................................................................ 20 0 1 3.00 3 3 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAAGA....................................................................................................... 26 2 1 3.00 3 3 0 0
.............................................................................AGGCAAGATGATGGCATAGCTGTT......................................................................................................... 24 1 1 3.00 3 3 0 0
.............................................................................AGGGAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTAG.......................................................................................................... 23 2 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTATAA........................................................................................................ 25 3 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTAGA......................................................................................................... 24 3 2 2.00 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTGA....................................................................................................... 26 0 1 2.00 2 2 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGTAG........................................................................................................ 26 2 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCAGTT......................................................................................................... 24 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCGTAGCTGT.......................................................................................................... 23 1 1 2.00 2 2 0 0
.............................................................................AGGAAAGATGCTGGCATAGCT............................................................................................................ 21 1 1 2.00 2 2 0 0
.................................................................................................................TGCTATGCCAACATATTG........................................................................... 18 0 1 2.00 2 2 0 0
................................................................................................................ATGCTATGCCAACATATTGCCATC...................................................................... 24 1 1 2.00 2 1 1 0
.............................................................................AGGCAAGATGCCGGCATAGCTGA.......................................................................................................... 23 2 3 2.00 6 6 0 0
.............................................................................CGGCAAGATGCTGGCATAGCT............................................................................................................ 21 1 1 2.00 2 2 0 0
.............................................................................CGGCAAGATGCTGGCATAGCTGA.......................................................................................................... 23 2 1 2.00 2 2 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGTA......................................................................................................... 25 2 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTTT....................................................................................................... 26 2 1 2.00 2 1 1 0
.................................................................................................................TGCTATGCCAACATATTGCA......................................................................... 20 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGTATAGCTGT.......................................................................................................... 23 1 1 2.00 2 2 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATAT..................................................................... 24 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCAAAGCTGTT......................................................................................................... 24 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCAGT.......................................................................................................... 23 1 1 2.00 2 2 0 0
..................................................................................................................GCTATGCCAACATATTGCCA........................................................................ 20 0 1 2.00 2 2 0 0
.............................................................................AGGAAAGATGCTGGCATAGCTG........................................................................................................... 22 1 1 2.00 2 2 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATGA..................................................................... 24 2 1 2.00 2 2 0 0
...............................................................................GCAAGATGCTGGCATAGCTGA.......................................................................................................... 21 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAGAAA...................................................................................................... 27 3 1 2.00 2 2 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGTT......................................................................................................... 25 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTC........................................................................................................... 22 1 1 2.00 2 2 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATCTT.................................................................... 25 0 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCCGGCATAGCTGTT......................................................................................................... 24 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGATGGCATAGCTGTAA........................................................................................................ 25 3 1 2.00 2 2 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATTA..................................................................... 24 2 1 2.00 2 2 0 0
................................................................................................................ATGCTATGCCAACATATTGCCATCT..................................................................... 25 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTTAA......................................................................................................... 24 3 2 2.00 4 4 0 0
..............................................................................................................AAATGCTATGCCAACATATTGCCATCT..................................................................... 27 2 1 2.00 2 2 0 0
..............................................................................GGCAAGATGCTGGCATAGCTAT.......................................................................................................... 22 1 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTTTT......................................................................................................... 24 1 1 2.00 2 1 1 0
.............................................................................AGGCAAGATGCCGGCATAGCTGC.......................................................................................................... 23 2 1 2.00 2 2 0 0
.............................................................................AGGCACGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 2.00 2 2 0 0
..................................................................................................................GCTATGCCAACATATTGCCAA....................................................................... 21 1 1 2.00 2 2 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATCG..................................................................... 24 1 1 2.00 2 2 0 0
..............................................................................GGCAAGATGCTGGCATAGCTATC......................................................................................................... 23 2 1 2.00 2 2 0 0
............................................................................AAGGCAAGATGCTGGCATAGCTGTTT........................................................................................................ 26 2 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTAATA........................................................................................................ 25 3 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAGA....................................................................................................... 26 1 1 2.00 2 2 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTTA........................................................................................................ 24 1 1 2.00 2 2 0 0
.............................................................................AGGCCAGATGCTGGCATAGCTGTAT........................................................................................................ 25 3 1 2.00 2 2 0 0
.................................................................................................................TCCTATGCCAACATATTGCCATC...................................................................... 23 1 1 2.00 2 0 2 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTTTT...................................................................................................... 27 3 1 2.00 2 2 0 0
.........................................................................AAAAAGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 27 3 1 2.00 2 2 0 0
.............................................................................AGGCAAGATGATGGCATAGCTGA.......................................................................................................... 23 2 3 1.67 5 5 0 0
.............................................................................AGGCAAGATGCTGGCATAACTGA.......................................................................................................... 23 2 4 1.50 6 6 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTAAT....................................................................................................... 25 3 2 1.50 3 3 0 0
.................................................................................................................TGCTATGCCAACATATTGCCAAAA..................................................................... 24 3 2 1.50 3 3 0 0
.............................................................................CGGAAAGATGCTGGCATAGCTGT.......................................................................................................... 23 2 2 1.50 3 3 0 0
.............................................................................AGGCAAGATGCTGGCATAA.............................................................................................................. 19 1 3 1.33 4 4 0 0
.................................................................................................................TGCTATGCCAACATATTGA.......................................................................... 19 1 3 1.33 4 4 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAG......................................................................................................... 24 2 6 1.17 7 7 0 0
.............................................................................AGGCAAGAAGCTGGCATAGCTTT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGT............................................................................................................. 20 1 2 1.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTAAT......................................................................................................... 24 2 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTAGCATAGCTGT.......................................................................................................... 22 1 1 1.00 1 0 1 0
.............................................................................AGGCAAGATGGTGGCATAGCTGTTT........................................................................................................ 25 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCACCATATTGCCAT....................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGATAA....................................................................................................... 26 2 1 1.00 1 1 0 0
................................................................................................................CTGCTATGCCAACCTATTGCCAT....................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................CGGCAAGATGCTGGCATAGCTAT.......................................................................................................... 23 2 1 1.00 1 1 0 0
............................................................................AAGGCAAGATGCTGGCATAGCT............................................................................................................ 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGACGCTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATCTTGCCATCA..................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTATAAA....................................................................................................... 26 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATGGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGCCAAGATGCTGGCATAGCTGTAA........................................................................................................ 25 3 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTAT........................................................................................................ 24 2 2 1.00 2 2 0 0
.............................................................................AGGCAAGATGCTGTCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCGTAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTATCATAGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................CGGCAAGATGCTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTG........................................................................................................ 25 0 1 1.00 1 1 0 0
.............................................................................GGGCAAGAAGCTGGCATAGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATCGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................................................................TGGTATGCCAACATATTGCCATCC..................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCCTT.......................................................................................................... 23 2 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTGT........................................................................................................ 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTATT......................................................................................................... 24 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTAAA...................................................................................................... 27 1 1 1.00 1 1 0 0
................................................................................................................CTGCTATGCCAACATATTGCCCT....................................................................... 23 1 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATAGA.................................................................... 25 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGACGCTGGCATAGCTGTA......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCAGGCATAGCTTT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAGCATATTGCCAT....................................................................... 22 1 1 1.00 1 1 0 0
............................................................................AAGGCAAGACGCTGGCATAGCTGT.......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGATGGCATAACTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
..............................................................................GGCAAGATTCTGGCATAGCTGT.......................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCCAGATGCTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAAAAA...................................................................................................... 27 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGTATAGCTGA.......................................................................................................... 23 2 2 1.00 2 2 0 0
.............................................................................AGGCAAGATGGTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGGTGTT...................................................................................................... 27 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCAGGCATAGCTGTTT........................................................................................................ 25 2 1 1.00 1 1 0 0
...............................................................................................................AATGCTATGCCAACATATTGCCATCA..................................................................... 26 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCAGGCATAGCTGTA......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATACTGGCATAGCTGTG......................................................................................................... 24 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATATTGCCATCAA.................................................................... 25 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGATGGCATAGCTG........................................................................................................... 22 1 2 1.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCCGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGAAAGATGCCGGCATAGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTGAAA...................................................................................................... 27 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCCGGCATAGCTA........................................................................................................... 22 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGCCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAAC....................................................................................................... 26 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTGAA....................................................................................................... 26 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGTTGGCATAGCTGTT......................................................................................................... 24 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTCTA......................................................................................................... 24 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATATTGCCAACT..................................................................... 24 1 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTGGCATAGCTAGTGA....................................................................................................... 25 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGAGGCTGCCATAGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGAAAGATGCTGGCATAGCTGTT......................................................................................................... 24 1 1 1.00 1 1 0 0
.............................................................................AGGCAATATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGACATAGATGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGATGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGAAGTTGGCATAGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGCTGCTGGCACAGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATATTGTCAT....................................................................... 22 1 1 1.00 1 0 1 0
...................................................................................................................CTATGCCAACATATTGCCATCA..................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTATTAT....................................................................................................... 26 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATCCTGGCATAGCTGTAAAA...................................................................................................... 27 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAC......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGCTGCTGGCATAGCTT........................................................................................................... 22 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCCGGCATAGCTGTTT........................................................................................................ 25 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTAGCATAGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................................................................TGATATGCCAACATATTGCCAT....................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCAGTA......................................................................................................... 24 2 1 1.00 1 1 0 0
............................................................................AAGGCAAGATGCTGGCATAGCCGT.......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTTAT...................................................................................................... 27 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATATTTCCATA...................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGCCATAGCTGA.......................................................................................................... 23 2 2 1.00 2 2 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAGTA...................................................................................................... 27 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGTCATAGCTCTT......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGGTGCTGGCATCGCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGAATAGCTGTT......................................................................................................... 24 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGAAG........................................................................................................ 25 2 1 1.00 1 1 0 0
............................................................................AAGGCAAGCTGCTGGCATAGCTGT.......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTTAAG...................................................................................................... 27 2 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGG.......................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTGTAACA...................................................................................................... 27 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCCGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCCGGCATAGCTAT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGTATAGCTGTAG........................................................................................................ 25 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCCTAGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................................................................TGCTAAGCCAACATATTGCCATC...................................................................... 23 1 1 1.00 1 1 0 0
.................................................................................AAGATGCTGGCATAGCTG........................................................................................................... 18 0 1 1.00 1 0 1 0
..............................................................................GGCAAGATGCTGGCATAGCTGC.......................................................................................................... 22 1 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCACCATATTGC.......................................................................... 19 1 1 1.00 1 1 0 0
.............................................................................ACGCAAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGGATAGCTGTA......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGCCATACCTGT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACATATTGCCAAG...................................................................... 23 2 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGAT......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCGAGATGCTGGCATAGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................CGGCAAGATGCTGGCATAGCTGTAA........................................................................................................ 25 3 1 1.00 1 1 0 0
.............................................................................AGGCCAGATGCTGGCATAGCTGTTT........................................................................................................ 25 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGACATAGCTGAT......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGCAATATGCTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
..................................................................................................................GCTATGCCAACATATTGCCATCAA.................................................................... 24 2 1 1.00 1 1 0 0
.................................................................................................................TGCTTTGCCAACATATTGCCATCT..................................................................... 24 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATCGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
................................................................................................................TTGCTATGCCAACATATTGCCAT....................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTCTAA........................................................................................................ 25 3 3 1.00 3 3 0 0
.............................................................................AGGCAAGATGGTGGCATAGCTAT.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTTTA......................................................................................................... 24 2 1 1.00 1 1 0 0
.............................................................................AGGGAAGATGCTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGACATAGCTGTAT........................................................................................................ 25 3 2 1.00 2 2 0 0
.................................................................................................................TGCTATACCAACATATTGCCATC...................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGTTGCTGGCATAGCTGTT......................................................................................................... 24 1 1 1.00 1 1 0 0
.....................................................................................................................ATGCCAACATATTGCCATCT..................................................................... 20 0 1 1.00 1 1 0 0
................................................................................................................CTGCTATGCCAACATATTGCCAT....................................................................... 23 0 1 1.00 1 1 0 0
.............................................................................AGGCGAGATGCTGGCATAGCT............................................................................................................ 21 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGCTGCTGGCATAGCTAT.......................................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................................CAAAGGCAAGATGCTGGCATAGCTGT.......................................................................................................... 26 3 1 1.00 1 1 0 0
.............................................................................CGGCAAGACGCTGGCATAGCTTT.......................................................................................................... 23 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGTTGGCATAGCTG........................................................................................................... 22 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGGTGGCATAGCTGAT......................................................................................................... 24 2 1 1.00 1 1 0 0
.................................................................................................................TGCTATGCCAACACATTGCCA........................................................................ 21 1 1 1.00 1 1 0 0
..............................................................................GGCAAGATGCTGGCATAGCTGTTATT...................................................................................................... 26 3 1 1.00 1 1 0 0
.............................................................................AGGCAAGCTGCTGGCATAGCTGA.......................................................................................................... 23 2 1 1.00 1 1 0 0
.................................................................................................................TGTTATGCCAACATATTGCCA........................................................................ 21 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATTGCTGT.......................................................................................................... 23 1 1 1.00 1 1 0 0
.............................................................................AGGCAAGATGCTGGCATAGCTCA.......................................................................................................... 23 2 1 1.00 1 1 0 0
.............................................................................TGGCAAGATGCTGGCATAGCTGG.......................................................................................................... 23 2 1 1.00 1 1 0 0

Anti-sense strand reads

TCCACCTTCCTCTCTAACACCTTTTCATTTTGTTGTTTCTCCGCACCATAACGAGGACTTTGAACCTTGACCTCTCCTCCGTTCTACGACCGTATCGACAACTTGACTCTTGGACGATACGGTTGTATAACGGTAGAAAGGACAGACTGTCGTCGAACCGGTGGAGGTACGGTAAGGAGGCACAGGACGATGTTCGTCATGCACTA
*******************************************************((((.((.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).))))))...************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:45 PM