ID:

rno-mir-3102

 Coordinate:

chr1:165921184-165921320 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-50.0 -49.9 -49.8

Sense Strand Reads

CAGACCTCATTGTCTGTACCACCCTGAAACGGAAGTCGGGCTCCCTGAGGCGCAGCTCCATGAGCCTGTGAGTGGCCAGGGTGGGGCTGGGTGGTGCAGGCAGGAGAGCCATTGATCTATTGCGGGCTCTACTCCCTGCCCCAGCCAGAGCACCCCATTGGCTACCCACAGGTACACAGCTGCCAGTGTCATTGATACAGCCAGCAAATACAAGATGCTGTGGAAGCTGCCATTGGA
**************************************************************************((((..((((((((((.(((.(((((.((.((((((..............)))))).)).))))).))).))))....))))))))))........((((......))))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGT................................................................. 25 1 1 450.00 450 450 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAG.................................................................. 24 0 1 419.00 419 419 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACA................................................................... 23 0 1 249.00 249 249 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGA................................................................. 25 1 1 160.00 160 160 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAA.................................................................. 24 1 1 78.00 78 78 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACACT................................................................. 25 2 1 71.00 71 71 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAC.................................................................. 24 1 1 44.00 44 44 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAC.................................................................... 22 0 1 35.00 35 35 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAT.................................................................. 24 1 1 35.00 35 35 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACAG.................................................................. 23 0 1 21.00 21 21 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAT............................................................................................................................. 23 0 1 20.00 20 20 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTAA............................................................... 27 2 1 16.00 16 16 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCA.............................................................................................................................. 22 0 1 15.00 15 14 1
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTT................................................................ 26 1 1 14.00 14 14 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCATT............................................................................................................................ 24 0 1 13.00 13 13 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACA................................................................... 24 0 1 13.00 13 13 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAT................................................................... 23 2 1 13.00 13 13 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACAGT................................................................. 24 1 1 12.00 12 12 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTTT............................................................................................................................ 24 1 1 12.00 12 12 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAAA............................................................................................................................ 24 2 1 11.00 11 11 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAA............................................................................................................................. 23 1 1 11.00 11 11 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTATT........................................................................................................................... 25 3 1 11.00 11 0 11
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAAT................................................................. 25 2 1 10.00 10 10 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAAT............................................................................................................................ 24 1 1 10.00 10 10 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAA.................................................................... 22 1 1 9.00 9 9 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAAG.................................................................. 24 1 1 8.00 8 8 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACA................................................................... 22 0 1 8.00 8 8 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCT.............................................................................................................................. 22 1 1 8.00 8 8 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTA............................................................................................................................. 23 2 1 7.00 7 7 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAAGT................................................................. 25 2 1 6.00 6 6 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACACC................................................................. 25 2 1 6.00 6 6 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTT............................................................................................................................. 23 1 1 6.00 6 6 0
.........................................................................................GGTGGTGCAGGCAGGAGAGC................................................................................................................................ 20 0 1 6.00 6 6 0
...............................................................................................................................................................................................................ATACAAGATGCTGTGGAAGCTGCCATT... 27 0 1 6.00 6 6 0
...................................................................................................................................................GAGCACCCCATTGACTACCCACAG.................................................................. 24 1 1 5.00 5 5 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTAT............................................................................................................................ 24 2 1 5.00 5 5 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACAGT................................................................. 26 1 1 5.00 5 5 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAA................................................................... 23 1 1 5.00 5 5 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTAT............................................................... 27 3 1 5.00 5 5 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAAA.................................................................. 24 2 1 5.00 5 5 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTTTT........................................................................................................................... 25 2 1 5.00 5 5 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTTAT........................................................................................................................... 25 3 1 4.00 4 4 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCTAT............................................................................................................................. 23 1 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTTAC.............................................................. 28 1 1 4.00 4 4 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGA................................................................. 22 1 1 4.00 4 4 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCC............................................................................................................................... 21 0 1 4.00 4 4 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCATA............................................................................................................................ 24 1 1 4.00 4 4 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGAT................................................................ 23 1 1 4.00 4 4 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACAGA................................................................. 26 1 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCACAG.................................................................. 24 1 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGAT................................................................ 26 1 1 4.00 4 4 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATTA....................................................................................... 24 3 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACT................................................................... 23 1 1 4.00 4 4 0
......................................................................................................................................................CACCCCATTGGCTACCCACA................................................................... 20 0 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCA..................................................................... 21 0 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCATA................................................................... 23 1 1 4.00 4 4 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATAT....................................................................................... 24 2 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGAA................................................................ 26 2 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCACAGT................................................................. 25 2 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAAGA................................................................. 25 2 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACACA................................................................. 25 2 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGCCTACCCACAGT................................................................. 25 2 1 4.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAT.................................................................... 22 1 1 3.00 3 3 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGAA................................................................ 23 2 1 3.00 3 3 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACATT................................................................. 25 2 1 3.00 3 3 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCATTT........................................................................................................................... 25 1 1 3.00 3 3 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGAAA............................................................... 24 2 1 3.00 3 3 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACATT................................................................. 24 2 1 3.00 3 3 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATAA....................................................................................... 24 2 1 3.00 3 3 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGT................................................................. 22 1 1 3.00 3 3 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGAGA............................................................... 27 2 1 3.00 3 3 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGAAT............................................................... 24 3 1 3.00 3 3 0
........................................................................................................................................................CCCCATTGGCTACCCACA................................................................... 18 0 1 3.00 3 3 0
...................................................................................................................................................GAGCACCCCATTGACTACCCACAGT................................................................. 25 2 1 3.00 3 3 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATT........................................................................................ 23 2 1 3.00 3 3 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACAG.................................................................. 25 0 1 3.00 3 3 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTTT............................................................... 27 2 1 3.00 3 3 0
.....................................................................................................................................................GCACCCCATTGGCTACCCACAGA................................................................. 23 1 1 3.00 3 3 0
...................................................................................................................................................GAGAACCCCATTGGCTACCCACAGT................................................................. 25 2 1 3.00 3 3 0
...................................................................................................................................................GAGCACCCCATTGACTACCCACA................................................................... 23 1 1 3.00 3 3 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACTA.................................................................. 24 2 1 3.00 3 3 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCAT.............................................................................................................................. 22 2 2 2.50 5 5 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGATA............................................................... 24 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACCGT................................................................. 25 2 1 2.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCATAA........................................................................................................................... 25 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAAA................................................................. 25 2 2 2.00 4 4 0
.....................................................................................................................................................GCACCCCATTGGCTACCCACA................................................................... 21 0 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCACA................................................................... 23 1 1 2.00 2 2 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACAC.................................................................. 25 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACATAA................................................................ 26 3 1 2.00 2 2 0
...................................................................................................................................................GATCACCCCATTGGCTACCCACAGT................................................................. 25 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAGAG.................................................................. 24 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACACTT................................................................ 26 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAGA................................................................... 23 1 1 2.00 2 2 0
..........TGTCTGTACCACCCTGAAACGGAAGTC........................................................................................................................................................................................................ 27 0 1 2.00 2 2 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACT................................................................... 24 1 1 2.00 2 2 0
...............................................................................................................................................GGGGGAGCACCCCATTGGCTACCCACAG.................................................................. 28 3 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTA................................................................ 26 2 1 2.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAAAAA.......................................................................................................................... 26 3 1 2.00 2 2 0
.......................................................................................................................................................ACCCCATTGGCTACCCACAGT................................................................. 21 1 1 2.00 2 2 0
..........................................................................................GTGGTGCAGGCAGGAGAGCCAA............................................................................................................................. 22 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACTT.................................................................. 24 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCTACAG.................................................................. 24 1 1 2.00 2 2 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCAC.................................................................... 23 0 1 2.00 2 2 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATTT....................................................................................... 24 3 4 2.00 8 8 0
....................................................................................................................................................AGCACCCAATTGGCTACCCACAG.................................................................. 23 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACTAA................................................................. 25 3 2 2.00 4 4 0
...................................................................................................................................................GAGCACCCCATTGGCTA......................................................................... 17 0 1 2.00 2 2 0
................................................................................................................................................AAAGAGCACCCCATTGGCTACCCACAGT................................................................. 28 3 1 2.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCTAA............................................................................................................................. 23 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGATACCCACAG.................................................................. 24 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACACACAGT................................................................. 25 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCAATGGCTACCCACAGT................................................................. 25 2 1 2.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTTA............................................................................................................................ 24 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGCCTACCCACA................................................................... 23 1 1 2.00 2 2 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATAAA...................................................................................... 25 3 1 2.00 2 2 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGTAA............................................................... 24 2 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCATAGT................................................................. 25 2 1 2.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCAA.............................................................................................................................. 22 1 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAGAA.................................................................. 24 2 1 2.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAG................................................................................................................................. 19 0 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACTTA................................................................. 25 3 1 2.00 2 2 0
.......................................................................................................................................................ACCCCATTGGCTACCCACAGATTGA............................................................. 25 3 1 2.00 2 2 0
...................................................................................................................................................GAGCACCCCATGGACTACCCACA................................................................... 23 2 1 1.00 1 1 0
...........................................................................................................................................................................................................GCAAATACAAGATGCTGTGGAGGCT......... 25 1 1 1.00 1 1 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACAA.................................................................. 25 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCATAA.................................................................. 24 2 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCCATA........................................................................................................................... 25 3 2 1.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCG.............................................................................................................................. 22 1 1 1.00 1 1 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCACACT................................................................. 26 2 1 1.00 1 1 0
...................................................................................................................................................GAGAACCCCATTGGCTACCCACACC................................................................. 25 3 1 1.00 1 1 0
.........................................................................................GGCGGTGCAGGCAGGAGAGCCTT............................................................................................................................. 23 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGCCTACGCACAGT................................................................. 25 3 1 1.00 1 1 0
........................................................................................................................................................CCCCATTGGCTACCCACAG.................................................................. 19 0 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCATACA................................................................. 25 3 1 1.00 1 1 0
...................................................................................................................................................GACAACCCCATTGGCTACCCACAG.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCTAAG.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATCGGCTACCCACAGAT................................................................ 26 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAGAGA................................................................. 25 2 1 1.00 1 1 0
...........................................................................................TGGTGCAGGCAGGAGAGCCTAT............................................................................................................................ 22 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGATACCCACAGAT................................................................ 26 2 1 1.00 1 1 0
...................................................................................................................................................GACCACCCCATTGGCTACCCACAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATAGGCTACCCACAT.................................................................. 24 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACCCT................................................................. 24 3 1 1.00 1 1 0
................................................................................................................................................ATCGAGCACCCCATTGGCTACCCACAG.................................................................. 27 3 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACAGTAA............................................................... 26 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACTCAAAG.................................................................. 24 2 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTCCCCACAGT................................................................. 22 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTAACCACAGT................................................................. 25 2 1 1.00 1 1 0
..........................................................................................GTGGTGCAGGCAGGAGAGCCAAT............................................................................................................................ 23 1 1 1.00 1 1 0
...................................................................................................................................................GCGCACCCCATTGGCTACCCACAGA................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCCCAGAGA............................................................... 27 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAAAT................................................................ 26 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACTGTTT............................................................... 27 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACGG.................................................................. 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGACTACCCATAGA................................................................. 25 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACCA.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GCGCACCCCATTGGCTACCCACA................................................................... 23 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATCGGCTACCCACAT.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GACCACCCCATTGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
.........................................................................................GGTGGTGCCGGCAGGAGAGCCAT............................................................................................................................. 23 1 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACAGA................................................................. 24 1 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGTA................................................................ 23 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCAACCCACAG.................................................................. 23 1 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGATAA.............................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGCCTACCCAC.................................................................... 22 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATCGGCTACCCACA................................................................... 23 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCACTGGCTACACACAG.................................................................. 24 2 1 1.00 1 1 0
..................................................................................................................................................AGAGCACCCCATTGGCTACCCCCAGT................................................................. 26 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGTTACCCACACT................................................................. 25 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCTGAGA................................................................. 25 3 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTTAA........................................................................................................................... 25 3 2 1.00 2 2 0
...................................................................................................................................................GACCACCCCATTGGCTACCCACAGTAA............................................................... 27 3 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCAGT............................................................................................................................. 23 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATAGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCCCAG.................................................................. 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGG................................................................. 25 0 1 1.00 1 1 0
.............................................................................................................................GCTCTACTCCCTGCCCCAGCCAT......................................................................................... 23 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTTA............................................................... 27 1 1 1.00 1 1 0
..................................................................................................................................................AGATCACCCCATTGGCTACCCACA................................................................... 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTATCCACAGA................................................................. 25 2 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCAAT............................................................................................................................. 23 1 1 1.00 1 1 0
.....................................................................................................................................................GCACCCCATTGGCTACCCACAGT................................................................. 23 1 1 1.00 1 1 0
.................................................................................................................................TACTCCCTGCCCCAGCCAGAGCACC................................................................................... 25 0 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATAGGCTACCCACTGT................................................................. 25 3 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGTT................................................................ 23 1 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACAT.................................................................. 23 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGCCTACCCACATT................................................................. 25 3 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAATT........................................................................................................................... 25 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCCCAGA................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGGTACCCACAGT................................................................. 25 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTCGCTACCCACAG.................................................................. 23 1 1 1.00 1 1 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATAAT...................................................................................... 25 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATCGGCTACCCACAGA................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GCGCACCCCATTGGCTACCCACAA.................................................................. 24 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATCGGCTACCCACAGT................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCAA.................................................................... 22 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGTTACCCACAGT................................................................. 25 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACACC................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACATAT................................................................ 26 2 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCACAT........................................................................................................................... 25 3 1 1.00 1 1 0
.............................................................................................................................GCTCTACTCCCTACCCCAGCCAT......................................................................................... 23 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATCGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGACTACCCACAGA................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCAATGGCTACCCACAGA................................................................. 25 2 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAGTAAT......................................................................................................................... 27 2 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCACACT................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCAATTGGCTACCCACA................................................................... 23 1 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCCTA............................................................................................................................ 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGGACCCCATTGGCTACCCACAA.................................................................. 24 2 1 1.00 1 1 0
........................TGAAACGGAAGTCGGGCTCCCTGAGGC.......................................................................................................................................................................................... 27 0 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCAAAGT................................................................. 24 2 1 1.00 1 1 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCAT......................................................................................... 22 1 1 1.00 1 1 0
...................................................................GTGAGTGGCCAGGGTGGGGCTGTAA................................................................................................................................................. 25 3 2 1.00 2 2 0
...................................................................................................................................................GAGAACCCCATTGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGCAA............................................................... 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCACTGGCTACCCACAGAGA............................................................... 27 3 1 1.00 1 1 0
...............................................................................................................................TCTACTCCCTGCCCCAGCCAT......................................................................................... 21 1 2 1.00 2 2 0
.........................................................................................GGTGGTGCAGGCAGGAGACCCTTTT........................................................................................................................... 25 3 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTTTA........................................................................................................................... 25 2 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAGT............................................................................................................................ 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGCCCCCCATTGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
.......................................................................................................................................................ACCCCATTGGATACCCACAGT................................................................. 21 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGATACCCACAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAGAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGGACCCCATTGGCTACCCACA................................................................... 23 1 1 1.00 1 1 0
.........................................................................................AGTGGTGCAGGCAGGAGAGCCTTT............................................................................................................................ 24 2 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAG.................................................................. 21 0 1 1.00 1 1 0
....................................................................................................................................................AGCACCCCATTGGCTACCCAC.................................................................... 21 0 1 1.00 1 1 0
.........................................................................................GGTGGTGCCGGCAGGAGAGCCTTT............................................................................................................................ 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACACACAC.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGC................................................................. 25 1 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTAA............................................................................................................................ 24 3 6 1.00 6 6 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCACAGAGA............................................................... 27 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCTCATTGGCTACCCACAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCTCATTGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGATT............................................................... 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATAGGCTACCCACAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACGCCATTGGCTACCCACAA.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GTGCACCCCATTGGCTACCCACA................................................................... 23 1 1 1.00 1 1 0
...................................................................................................................................................GACCACCCCATTGGCTACCCACAT.................................................................. 24 2 1 1.00 1 1 0
.................................................................................................................................................AAGAGCACCCCATTGGCTACCCACAC.................................................................. 26 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCCCAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCCTTGGCTACCCAAAGT................................................................. 25 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACCT.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGATACCCAAAG.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GGGCACCCCATTGGCTACCCAC.................................................................... 22 1 1 1.00 1 1 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATA........................................................................................ 23 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACTCACAG.................................................................. 24 1 1 1.00 1 1 0
......................................................................................................................................................CACCCCATTGGCTACCCACAGTTA............................................................... 24 1 1 1.00 1 1 0
...................................................................................................................................................GAGAACCCCATTGGCTACCCACAC.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCTACAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................TAGCACCCCATTGGCTACCCACAGA................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GCGCACCCCATTGGCTACCCACACT................................................................. 25 3 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAATTAA......................................................................................................................... 27 3 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTTGCTACCCACAGT................................................................. 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAAT.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................CAGCACCCCATTGGCTACCCACAG.................................................................. 24 1 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGAAGAGCCAT............................................................................................................................. 23 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCAATGACTACCCACAGT................................................................. 25 3 1 1.00 1 1 0
........................................................................................................................................................CCCCATTGGCTACCCACAGT................................................................. 20 1 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGACTACCCACAA.................................................................. 24 2 1 1.00 1 1 0
...................................................................................................................................................GACCACCCCATTGGCTACCCACAAT................................................................. 25 3 1 1.00 1 1 0
.........................................................................................GGGGGTGCAGGCAGGAGAGCCATTT........................................................................................................................... 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACAGTTTT.............................................................. 28 3 1 1.00 1 1 0
.................................................................................................................................................CAGAGCACCCCATTGGCTACCCATT................................................................... 25 2 1 1.00 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCATAG.................................................................. 24 1 1 1.00 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAAAA........................................................................................................................... 25 3 6 0.83 5 5 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAAAT........................................................................................................................... 25 3 2 0.50 1 1 0
....................................................................................................................................................AGCCCCCCCTTGGCTACCCACAGA................................................................. 24 3 2 0.50 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAAAC........................................................................................................................... 25 3 2 0.50 1 1 0
.........................................................................................GGGGGTGCAGGCAGGAGAGCCAA............................................................................................................................. 23 2 2 0.50 1 1 0
.........................................................................................................................................................CCCATTGGCTACCCACA................................................................... 17 0 2 0.50 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCATGA........................................................................................................................... 25 2 2 0.50 1 1 0
..........................................................................................GTGGTGCAGGCCGGAGAGCCAATT........................................................................................................................... 24 3 2 0.50 1 1 0
...................................................................................................................................................GAGCCCACCATTGGCTACCCACAGT................................................................. 25 3 2 0.50 1 1 0
...................................................................................................................................................GAGCACCCCATCGGCTACCCACTT.................................................................. 24 3 2 0.50 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCACTTT................................................................. 25 3 2 0.50 1 1 0
...................................................................................................................................................GACCACCCCATTGGCTACCCACAAA................................................................. 25 3 2 0.50 1 1 0
...........................................................................................TGGTGCAGGCAGGAGAGCCAAA............................................................................................................................ 22 2 2 0.50 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCAAAAA................................................................. 25 3 2 0.50 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAG............................................................................................................................. 23 1 2 0.50 1 1 0
...................................................................................................................................................GCGCACCCCATTGGCTACCCAAT................................................................... 23 3 2 0.50 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTATA........................................................................................................................... 25 3 2 0.50 1 1 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCATTGT...................................................................................... 25 3 2 0.50 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTACCCCCT................................................................... 23 2 2 0.50 1 1 0
...............................................................................................................................TCTACTCCCTGCCCCAGCCATTA....................................................................................... 23 3 3 0.33 1 1 0
...................................................................................................................................................CAGCACCCAATTGGCTACCCACAC.................................................................. 24 3 3 0.33 1 1 0
..............................................................................................................................CTCTACTCCCTGCCCCAGCCACTGT...................................................................................... 25 3 3 0.33 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCAAAA............................................................................................................................ 24 3 6 0.33 2 2 0
...................................................................................................................................................GGGCACCCCATTGGCTACCCAAAC.................................................................. 24 3 3 0.33 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCAGA............................................................................................................................ 24 2 3 0.33 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCAAA............................................................................................................................. 23 2 3 0.33 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCCTAG............................................................................................................................ 24 3 7 0.29 2 2 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCAAAA.................................................................. 24 3 4 0.25 1 1 0
...................................................................................................................................................GAGCACCCCATTGGCTCCCCTAA................................................................... 23 3 4 0.25 1 1 0
........................................................................................AGGTGGTGCAGGCAGGAGAGCCAAA............................................................................................................................ 25 3 4 0.25 1 1 0
...........................................................................................................................TATCTCTACTCCCTGCCCCAGCCA.......................................................................................... 24 3 4 0.25 1 1 0
.........................................................................................GGTGGTGCAGGCAGGAGAGCTTA............................................................................................................................. 23 3 9 0.22 2 2 0
..........................................................................................GTGGTGCAGGCAGGAGAGCCTTAT........................................................................................................................... 24 3 5 0.20 1 1 0
.....................................................................................................................................................GCAGCCCATTGGCTCCCCACAGT................................................................. 23 3 5 0.20 1 1 0

Anti-sense strand reads

GTCTGGAGTAACAGACATGGTGGGACTTTGCCTTCAGCCCGAGGGACTCCGCGTCGAGGTACTCGGACACTCACCGGTCCCACCCCGACCCACCACGTCCGTCCTCTCGGTAACTAGATAACGCCCGAGATGAGGGACGGGGTCGGTCTCGTGGGGTAACCGATGGGTGTCCATGTGTCGACGGTCACAGTAACTATGTCGGTCGTTTATGTTCTACGACACCTTCGACGGTAACCT
***************************************************((((..((((((((((.(((.(((((.((.((((((..............)))))).)).))))).))).))))....))))))))))........((((......))))..************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:31 PM