ID:

rno-mir-30c-1

 Coordinate:

chr5:139699877-139699965 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.3 -34.3 -34.1
mature
  1. chr5:139699926-139699949 -
  2. chr9:29562389-29562412 +
star

Sense Strand Reads

TGAGATGCTGATCTCTAGGTGGTCAGAGGCCTACAAGCCCCTTGGCTATAACCATGTTGTAGTGTGTGTAAACATCCTACACTCTCAGCTGTGAGCTCAAGGTGGCTGGGAGAGGGTTGTTTACTCCTTCTGCCATGGAAAACGTCAGCTTGAAGAACAATCTCTTCACCCAACAGATCGGACAGAATG
***************************************************(((((..((((.....(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).....)))))))))....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528818
Adult_testes_Mili_IP		 GSM1528817
Adult_testes
..................................................................TGTAAACATCCTACACTCTCAGCT................................................................................................... 24 0 2 64355.50 128711 128239 393 79
..................................................................TGTAAACATCCTACACTCTCAGC.................................................................................................... 23 0 2 6073.00 12146 12029 61 56
..................................................................TGTAAACATCCTACACTCTCAGCTT.................................................................................................. 25 1 2 5361.00 10722 10687 31 4
..................................................................TGTAAACATCCTACACTCTCAGCTA.................................................................................................. 25 1 2 3448.00 6896 6860 32 4
...................................................................GTAAACATCCTACACTCTCAGCT................................................................................................... 23 0 2 2568.00 5136 5117 18 1
..................................................................TGTAAACATCCTACACTCTCAGCTAT................................................................................................. 26 1 2 2098.50 4197 4182 13 2
..................................................................TGTAAACATCCTACACTCTCAGCA................................................................................................... 24 1 2 1638.00 3276 3265 7 4
..................................................................TGTAAACATCCTACACTCTCAGCTTT................................................................................................. 26 1 2 1185.00 2370 2339 29 2
..................................................................TGTAAACATCCTACACTCTCAGCTAA................................................................................................. 26 2 2 1101.50 2203 2192 11 0
.................................................................ATGTAAACATCCTACACTCTCAGCT................................................................................................... 25 1 2 1074.50 2149 2125 3 21
..................................................................TGTAAACATCCTACACTCTCAG..................................................................................................... 22 0 2 900.00 1800 1763 13 24
..................................................................TGTAAACATCCTACACTCTCAGA.................................................................................................... 23 1 2 863.50 1727 1680 17 30
..................................................................TGTAAACATCCTACACTCTCA...................................................................................................... 21 0 2 850.50 1701 1661 7 33
..................................................................TGTCAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 657.00 1314 1306 8 0
..................................................................TGTAAACATCCTACCCTCTCAGCT................................................................................................... 24 1 2 519.50 1039 1039 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAA.................................................................................................. 25 2 2 502.50 1005 1001 4 0
..................................................................TGTAAACATCCTACACTCTCAGT.................................................................................................... 23 1 2 435.50 871 870 0 1
..................................................................TGTAAACATCCTAAACTCTCAGCT................................................................................................... 24 1 2 299.50 599 592 7 0
..................................................................TGTAAACATCCTACACTCTCAGCAT.................................................................................................. 25 2 2 296.00 592 579 13 0
...................................................................GTAAACATCCTACACTCTCAGC.................................................................................................... 22 0 2 211.50 423 421 0 2
..................................................................TGTAAACATCCTACACTCTCAGCTAAA................................................................................................ 27 3 2 209.00 418 418 0 0
...................................................................GTAAACATCCTACACTCTCAGCTT.................................................................................................. 24 1 2 204.00 408 408 0 0
..................................................................TGTAAACATCCTACACTCTCAACT................................................................................................... 24 1 2 197.50 395 393 2 0
..................................................................TGTAAACATCCTACACTCTCAGCTTA................................................................................................. 26 2 2 195.50 391 391 0 0
..................................................................TGTAAACATCCTACACTCTCACCT................................................................................................... 24 1 2 188.50 377 374 3 0
..................................................................TGTAAACATCATACACTCTCAGCT................................................................................................... 24 1 2 178.50 357 351 6 0
..................................................................TGTAAACATCCTACACTCTCAGAA................................................................................................... 24 2 2 150.50 301 300 0 1
..................................................................TGTAAACATCCTACACTCTCAGCTTTT................................................................................................ 27 2 2 148.50 297 296 0 1
..................................................................TGTAAACATCCTATACTCTCAGCT................................................................................................... 24 1 2 146.50 293 290 3 0
..................................................................TGTAAACATCCTACACTCTCAGCTTAT................................................................................................ 27 3 2 136.50 273 273 0 0
...................................................................GTAAACATCCTACACTCTCAGCTA.................................................................................................. 24 1 2 131.00 262 262 0 0
.................................................................ATGTAAACATCCTACACTCTCAGC.................................................................................................... 24 1 2 116.00 232 210 0 22
.................................................................ATGTAAACATCCTACACTCTCAGCTT.................................................................................................. 26 2 2 110.00 220 218 0 2
..................................................................TGTAAACATCCTACACTCTCAGCTG.................................................................................................. 25 0 2 102.50 205 205 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATT................................................................................................ 27 2 2 95.50 191 187 4 0
..................................................................TGTAAACATCTTACACTCTCAGCT................................................................................................... 24 1 2 90.50 181 179 1 1
.................................................................TTGTAAACATCCTACACTCTCAGC.................................................................................................... 24 1 2 89.00 178 178 0 0
..................................................................TGTAAACATCCTACACTCTCCGCT................................................................................................... 24 1 2 87.00 174 174 0 0
..................................................................TGTCAACATCCTACCCTCTCAGCT................................................................................................... 24 2 2 84.00 168 167 1 0
..................................................................TGTAAACATCCTACACTCTCATCT................................................................................................... 24 1 2 84.00 168 161 7 0
..................................................................TGTAAACATCCTACACTCTCAGCTTAA................................................................................................ 27 3 2 82.50 165 159 6 0
...................................................................GTAAACATCCTACACTCTCAGCTAT................................................................................................. 25 1 2 82.00 164 164 0 0
..................................................................TGTAAACATCCTACACTCT........................................................................................................ 19 0 2 79.50 159 157 0 2
..................................................................TGTAAACATCCTACACTCTCAGCTAAT................................................................................................ 27 3 2 79.50 159 159 0 0
...................................................................GTAAACATCCTACACTCTCAGCA................................................................................................... 23 1 2 76.50 153 153 0 0
..................................................................TGTAAACATCCCACACTCTCAGCT................................................................................................... 24 1 2 70.50 141 141 0 0
..................................................................TGTAAACATCCTACACTCTC....................................................................................................... 20 0 2 69.00 138 137 0 1
..................................................................TGTAAACATCGTACACTCTCAGCT................................................................................................... 24 1 2 68.50 137 136 0 1
..................................................................TGTAAACATCCTACACTCTCAGAT................................................................................................... 24 1 2 66.50 133 133 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCTA.................................................................................................. 26 2 2 63.00 126 126 0 0
..................................................................TGTCAACATCCTACACTCTCAGCTT.................................................................................................. 25 2 2 60.50 121 121 0 0
..................................................................TGTCAACATCCTACACTCTCAGC.................................................................................................... 23 1 2 60.50 121 121 0 0
..................................................................TGTAAACATCCAACACTCTCAGCT................................................................................................... 24 1 2 59.00 118 118 0 0
..................................................................TGTAAACATCCTACACTCTCAGTT................................................................................................... 24 1 2 58.50 117 117 0 0
..................................................................TGCAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 57.50 115 115 0 0
..................................................................TGTAAACATCCTACACTCTCAGCG................................................................................................... 24 1 2 56.50 113 111 1 1
..................................................................TGTAAACCTCCTACACTCTCAGCT................................................................................................... 24 1 2 56.00 112 112 0 0
..................................................................TGTAAACATCCTACACTCTCAA..................................................................................................... 22 1 2 55.00 110 109 0 1
...................................................................GTAAACATCCTACACTCTCAGCTTT................................................................................................. 25 1 2 55.00 110 110 0 0
..................................................................TGTAAACATCCTAGACTCTCAGCT................................................................................................... 24 1 2 55.00 110 109 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTAG................................................................................................. 26 2 2 54.00 108 108 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTGA................................................................................................. 26 1 2 54.00 108 107 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTTTAT............................................................................................... 28 3 2 52.50 105 105 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAGA................................................................................................ 27 3 2 50.50 101 101 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTGT................................................................................................. 26 0 2 49.50 99 99 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTT.................................................................................................. 25 2 2 48.00 96 96 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTTA................................................................................................ 27 2 2 44.50 89 89 0 0
..................................................................TGTAAACATCCTACCCTCTCAGC.................................................................................................... 23 1 2 43.00 86 85 1 0
..................................................................TGTAAACATCCTACACCCTCAGCT................................................................................................... 24 1 2 42.50 85 85 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTTTT............................................................................................... 28 3 2 41.50 83 83 0 0
..................................................................TGTAAACATCCTACACTCCCAGCT................................................................................................... 24 1 2 41.50 83 82 1 0
..................................................................TGCCAACATCCTACACTCTCAGCT................................................................................................... 24 2 2 40.00 80 80 0 0
..................................................................CGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 39.50 79 79 0 0
..................................................................TGTAAACATCCTACACTCTCAGCC................................................................................................... 24 1 2 38.00 76 76 0 0
.................................................................ATGTAAACATCCTACACTCTCAG..................................................................................................... 23 1 2 37.00 74 45 0 29
..................................................................TGTCAACATCCTACACTCTCAGCTA.................................................................................................. 25 2 2 36.50 73 73 0 0
...................................................................GTAAACATCCTACCCTCTCAGCT................................................................................................... 23 1 2 36.50 73 73 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATA................................................................................................ 27 2 2 36.50 73 73 0 0
..................................................................TGTACACATCCTACACTCTCAGCT................................................................................................... 24 1 2 35.50 71 71 0 0
..................................................................TGTAAACATCCTACACTCACAGCT................................................................................................... 24 1 2 35.50 71 71 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCTAT................................................................................................. 27 2 2 35.00 70 70 0 0
..................................................................TGAAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 35.00 70 70 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAC................................................................................................. 26 2 2 34.00 68 62 6 0
..................................................................TGTAAACATCCTACACTCTCAGAAA.................................................................................................. 25 3 3 34.00 102 102 0 0
..................................................................TGTAAACATCCTACACTCTCAGTA................................................................................................... 24 2 2 33.50 67 67 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAAAA............................................................................................... 28 3 2 33.50 67 67 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAG.................................................................................................. 25 1 2 33.50 67 67 0 0
..................................................................TGTCAACATCCTACACTCTCAGCTAT................................................................................................. 26 2 2 33.00 66 66 0 0
...................................................................GTAAACATCCTACACTCTCAGAT................................................................................................... 23 1 2 32.50 65 62 3 0
..................................................................TGGAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 32.50 65 65 0 0
..................................................................TGTAAACATCCTACGCTCTCAGCT................................................................................................... 24 1 2 31.50 63 63 0 0
..................................................................TGTAAACATCCTACACTCTCAGCGA.................................................................................................. 25 2 2 31.50 63 63 0 0
.................................................................ATGTAAACATCCTACACTCTCAGA.................................................................................................... 24 2 2 31.00 62 32 0 30
..................................................................TGTAAACATCCTACACACTCAGCT................................................................................................... 24 1 2 31.00 62 62 0 0
..................................................................TGTAAAAATCCTACACTCTCAGCT................................................................................................... 24 1 2 31.00 62 62 0 0
..................................................................TGTAAACACCCTACACTCTCAGCT................................................................................................... 24 1 2 30.50 61 60 1 0
..................................................................TGTAAACATCCTACACTCTCAGGT................................................................................................... 24 1 2 30.50 61 61 0 0
.....................................................................AAACATCCTACACTCTCAGCT................................................................................................... 21 0 2 30.00 60 59 0 1
.........................................................................ATCCTACACTCTCAGCT................................................................................................... 17 0 2 28.50 57 45 0 12
..................................................................TGTAAACATCCTAAACTCTCAGCTT.................................................................................................. 25 2 2 28.50 57 56 1 0
....................................................................TAAACATCCTACACTCTCAGCT................................................................................................... 22 0 2 28.00 56 56 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTA.................................................................................................. 25 2 2 28.00 56 56 0 0
...................................................................GTAAACATCCTACACTCTCAGCTAA................................................................................................. 25 2 3 28.00 84 84 0 0
..................................................................CGTCAACATCCTACACTCTCAGCT................................................................................................... 24 2 2 28.00 56 56 0 0
.......................................................................ACATCCTACACTCTCAGCT................................................................................................... 19 0 2 27.00 54 53 0 1
........................................................................CATCCTACACTCTCAGCT................................................................................................... 18 0 2 26.50 53 48 1 4
.................................................................ATGTAAACATCCTACACTCTCA...................................................................................................... 22 1 2 26.50 53 29 0 24
..................................................................TGTAAACATCCTACACTCTCAGCTATTT............................................................................................... 28 3 2 26.50 53 53 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATAT............................................................................................... 28 3 2 26.50 53 53 0 0
..................................................................TGACAACATCCTACACTCTCAGCT................................................................................................... 24 2 2 26.50 53 53 0 0
...................................................................GTAAACATCCTACACTCTCAG..................................................................................................... 21 0 3 25.67 77 76 0 1
..................................................................TGTAAACATACTACACTCTCAGCT................................................................................................... 24 1 2 25.50 51 50 1 0
..................................................................TGTAAACATCCTAAACTCTCAGC.................................................................................................... 23 1 2 25.00 50 49 0 1
..................................................................TGTAAACATCCTACACTCTCAGCTAAGA............................................................................................... 28 2 2 24.50 49 49 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAAA................................................................................................. 26 3 2 24.50 49 49 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTTAA............................................................................................... 28 2 2 24.50 49 49 0 0
..................................................................TGTAAACATCCTCCACTCTCAGCT................................................................................................... 24 1 2 24.00 48 48 0 0
..................................................................TGTAAACATCCTACTCTCTCAGCT................................................................................................... 24 1 2 24.00 48 47 1 0
......................................................................AACATCCTACACTCTCAGCT................................................................................................... 20 0 2 24.00 48 48 0 0
..................................................................TGTAACCATCCTACACTCTCAGCT................................................................................................... 24 1 2 24.00 48 48 0 0
...................................................................GTAAACATCCTACACTCTCAGCAA.................................................................................................. 24 2 2 23.50 47 47 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTAT................................................................................................. 26 2 2 23.50 47 47 0 0
..................................................................TGTTAACATCCTACCCTCTCAGCT................................................................................................... 24 2 2 23.00 46 46 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATAA............................................................................................... 28 2 2 23.00 46 46 0 0
..................................................................TGTCAACATCCTACACTCTCAGCA................................................................................................... 24 2 2 23.00 46 46 0 0
..................................................................TGTAAACATCCTACACTTTCAGCT................................................................................................... 24 1 2 22.50 45 45 0 0
..................................................................TGTAAACAACCTACACTCTCAGCT................................................................................................... 24 1 2 22.50 45 44 1 0
..................................................................GGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 22.50 45 44 0 1
..................................................................TGTCAACATCCTACACACTCAGCT................................................................................................... 24 2 2 21.50 43 43 0 0
..................................................................AGTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 21.50 43 42 0 1
..................................................................AGTCAACATCCTACACTCTCAGCT................................................................................................... 24 2 2 21.00 42 42 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAAT................................................................................................. 26 2 2 21.00 42 42 0 0
..................................................................TGTAAACATCCTACACTCTCAAA.................................................................................................... 23 2 3 20.67 62 61 0 1
..................................................................TGTAAATATCCTACACTCTCAGCT................................................................................................... 24 1 2 20.50 41 41 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAGT................................................................................................ 27 3 2 20.00 40 40 0 0
..................................................................TATAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 19.50 39 39 0 0
..................................................................TGTGAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 19.50 39 39 0 0
..................................................................TGTAAACATCCTACACTCTCAAC.................................................................................................... 23 1 2 19.00 38 38 0 0
..................................................................TGTAAACATCCTACACTCTTAGCT................................................................................................... 24 1 2 19.00 38 38 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCTTT................................................................................................. 27 2 2 19.00 38 38 0 0
...................................................................GTACACATCCTACACTCTCAGCT................................................................................................... 23 1 2 19.00 38 38 0 0
..................................................................TGTAAACATCCTACACTCTCAGCATT................................................................................................. 26 2 2 18.50 37 37 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCTAA................................................................................................. 27 3 2 18.50 37 37 0 0
..................................................................TGTAAACATCCTACACTCTCAT..................................................................................................... 22 1 2 18.00 36 36 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTC................................................................................................. 26 2 2 18.00 36 36 0 0
..................................................................TGTAAACATCCTAAACTCTCAGCTA.................................................................................................. 25 2 2 17.50 35 35 0 0
..................................................................TGTAGACATCCTACACTCTCAGCT................................................................................................... 24 1 2 17.50 35 35 0 0
..................................................................TGTAAACATCCTACACTATCAGCT................................................................................................... 24 1 2 17.00 34 34 0 0
..................................................................TGTAAACATCCTACACTCTCAAT.................................................................................................... 23 2 2 17.00 34 34 0 0
..................................................................TCTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 17.00 34 34 0 0
.................................................................ATGTAAACATCCTCCACTCTCAGCT................................................................................................... 25 2 2 16.50 33 33 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCA................................................................................................... 25 2 2 16.50 33 33 0 0
..................................................................TGTGAACATCCTACCCTCTCAGCT................................................................................................... 24 2 2 16.50 33 33 0 0
..................................................................TGTAAACATCCTACACTCTAAGCT................................................................................................... 24 1 2 16.00 32 31 1 0
..................................................................TGTAAACATCCTACACTCTCACCTT.................................................................................................. 25 2 2 16.00 32 32 0 0
...................................................................GTAAACATCCTACACTCTCAGA.................................................................................................... 22 1 3 16.00 48 48 0 0
..................................................................TGTAAACATCCTACAATCTCAGCT................................................................................................... 24 1 2 16.00 32 32 0 0
..................................................................TGTAAACATCCTACACTCTCAACTT.................................................................................................. 25 2 2 16.00 32 32 0 0
..................................................................TGTAAACATCCTATACTCTCAGCTT.................................................................................................. 25 2 2 16.00 32 32 0 0
..................................................................TGTAAACATTCTACACTCTCAGCT................................................................................................... 24 1 2 16.00 32 32 0 0
..................................................................TGTAAACATCCTGCACTCTCAGCT................................................................................................... 24 1 2 15.50 31 31 0 0
..................................................................TGTAAACATCCTACACTCTCGGCT................................................................................................... 24 1 2 15.50 31 31 0 0
..................................................................TGTAAACATCCTACACTCTCACC.................................................................................................... 23 1 2 15.50 31 31 0 0
..................................................................TGTAAACATCCTACACTCTCAGAAT.................................................................................................. 25 3 3 15.00 45 45 0 0
..................................................................TGTCAACATCCTAAACTCTCAGCT................................................................................................... 24 2 2 14.50 29 29 0 0
..................................................................TGTAAACGTCCTACACTCTCAGCT................................................................................................... 24 1 2 14.00 28 28 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTC.................................................................................................. 25 1 2 14.00 28 28 0 0
..................................................................TGTAAACATCCTACATTCTCAGCT................................................................................................... 24 1 2 14.00 28 28 0 0
..................................................................TGTAAACATCCTATACTCTCAGC.................................................................................................... 23 1 2 13.50 27 26 1 0
..................................................................TGTAAACATCCTAAACTCTCAGCTAT................................................................................................. 26 2 2 12.50 25 25 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAAG................................................................................................ 27 2 2 12.50 25 25 0 0
..................................................................TGTAAACATCCTACACTCTCAGCGT.................................................................................................. 25 2 2 12.00 24 24 0 0
..................................................................TTTAAACATCCTACACTCTCAGCT................................................................................................... 24 1 2 12.00 24 24 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCA................................................................................................... 24 2 2 12.00 24 24 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTAAGT............................................................................................... 28 3 2 12.00 24 24 0 0
...................................................................GTAAACATCCTACACTCTCA...................................................................................................... 20 0 3 12.00 36 34 0 2
..................................................................TGTAAACATCTTACACTCTCAGC.................................................................................................... 23 1 2 12.00 24 22 2 0
...................................................................GTAAACATCCTCCACTCTCAGCT................................................................................................... 23 1 2 12.00 24 24 0 0
............................................................GCTGAGTGTAAACATCCTACACTCTCAGCT................................................................................................... 30 3 1 12.00 12 12 0 0
..................................................................TGTAAACTTCCTACACTCTCAGCT................................................................................................... 24 1 2 11.50 23 23 0 0
.................................................................ATGTAAACATCCTACACTCTCCGCT................................................................................................... 25 2 2 11.00 22 22 0 0
..................................................................TGTCAACATCCTACACTCTCAGCTTT................................................................................................. 26 2 2 11.00 22 22 0 0
..................................................................TGTAAACATCCTACACTCTCACCTA.................................................................................................. 25 2 2 11.00 22 22 0 0
...................................................................GTAAACATCCTACACTCTCAGCAT.................................................................................................. 24 2 2 11.00 22 22 0 0
................................................................CTTGTAAACATCCTACACTCTCAG..................................................................................................... 24 2 2 11.00 22 22 0 0
.................................................................ATGTAAACATCATACACTCTCAGCT................................................................................................... 25 2 2 11.00 22 22 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTAAA............................................................................................... 28 3 2 11.00 22 22 0 0
..................................................................TGTCAACATCCTACACTCTCAGA.................................................................................................... 23 2 2 10.50 21 21 0 0
..................................................................TGTAAACATCCTACACTCTCAGTAA.................................................................................................. 25 3 4 10.50 42 42 0 0
.................................................................TTGTAAACATCCTACACTCTCAGCT................................................................................................... 25 1 2 10.50 21 21 0 0
..................................................................TGTCAACAACCTACACTCTCAGCT................................................................................................... 24 2 2 10.50 21 20 1 0
...................................................................GTAAACATCCTACACTCTCAGCTTTT................................................................................................ 26 2 2 10.00 20 20 0 0
................................................................TTTGTAAACATCCTACACTCTCAGC.................................................................................................... 25 1 1 10.00 10 10 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCC.............................................................. 22 0 1 10.00 10 10 0 0
..................................................................TGTCAACATCCTACACTCTCAGCTAA................................................................................................. 26 3 3 9.67 29 29 0 0
..................................................................TGTAAACATCCTACCCTCTCAG..................................................................................................... 22 1 2 9.50 19 16 3 0
..................................................................TGTAAACATCATACACTCTCAGCTAT................................................................................................. 26 2 2 9.50 19 19 0 0
..................................................................TGTAAACATCGTACACTCTCAGCTT.................................................................................................. 25 2 2 9.50 19 19 0 0
..................................................................TGTAAGCATCCTACACTCTCAGCT................................................................................................... 24 1 2 9.00 18 18 0 0
..................................................................TGTAAACATCCAACACTCTCAGCTT.................................................................................................. 25 2 2 9.00 18 18 0 0
..................................................................TGTAAACATCATACACTCTCAGC.................................................................................................... 23 1 2 9.00 18 18 0 0
..................................................................TGTCAACATCCTACACCCTCAGCT................................................................................................... 24 2 2 9.00 18 18 0 0
................................................................TTTGTAAACATCCTACACTCTCAGCT................................................................................................... 26 1 1 9.00 9 9 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTTTAT.............................................................................................. 29 3 2 9.00 18 18 0 0
..................................................................TGTAAACATCCTACACTCTCACCTAT................................................................................................. 26 2 2 9.00 18 18 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTTT................................................................................................. 26 2 2 9.00 18 16 2 0
..................................................................TGTAAACATCCTACACTCTCATCTA.................................................................................................. 25 2 2 9.00 18 18 0 0
..................................................................TGTATACATCCTACACTCTCAGCT................................................................................................... 24 1 2 8.50 17 17 0 0
..................................................................TGTAAACATCATACACTCTCAGCTT.................................................................................................. 25 2 4 8.50 34 34 0 0
..................................................................TGTAAACATCCTACACTCTCAACTAT................................................................................................. 26 2 2 8.50 17 16 1 0
..................................................................TGTAAACATCCTAAACTCTCAGCTTT................................................................................................. 26 2 2 8.50 17 16 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTGAA................................................................................................ 27 2 2 8.50 17 17 0 0
..................................................................TGTAAACATCCTACACTCTCAACTA.................................................................................................. 25 2 2 8.00 16 15 1 0
..................................................................TGGCAACATCCTACACTCTCAGCT................................................................................................... 24 2 2 8.00 16 15 1 0
..................................................................TGTAAACATCCTACACTCTCCGCTT.................................................................................................. 25 2 2 8.00 16 16 0 0
..................................................................TGTAAACATCCTACCCTCTCA...................................................................................................... 21 1 2 8.00 16 15 0 1
..................................................................TGTAAACAGCCTACACTCTCAGCT................................................................................................... 24 1 2 8.00 16 16 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTACA................................................................................................ 27 3 2 8.00 16 16 0 0
...................................................................GTAAACATCCTACACTCTCAGT.................................................................................................... 22 1 4 8.00 32 32 0 0
..................................................................TGTAAACATCATACACTCTCAGCTA.................................................................................................. 25 2 2 8.00 16 16 0 0
.........................................................................................................CTGGGAGAGGGTTGTTTACTCT.............................................................. 22 1 1 8.00 8 8 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCAA.................................................................................................. 26 3 2 8.00 16 16 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTGA................................................................................................ 27 3 2 8.00 16 16 0 0
..................................................................TGTAAACATCCTACACTCTCAGCCA.................................................................................................. 25 2 2 8.00 16 16 0 0
.............................................................GTGTATGTAAACATCCTACACTCTCAGCT................................................................................................... 29 1 1 8.00 8 8 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAC.................................................................................................. 25 2 2 7.50 15 15 0 0
..................................................................TGTCAACATCCTACACTCTCA...................................................................................................... 21 1 2 7.50 15 15 0 0
..................................................................TGTAAACATCCAACCCTCTCAGCT................................................................................................... 24 2 2 7.50 15 15 0 0
...................................................................GTAAACATCCTACACTCTCAGCTTAA................................................................................................ 26 3 2 7.50 15 15 0 0
..................................................................TGTAAACATCCTACACTCTCAGCAGA................................................................................................. 26 2 2 7.50 15 15 0 0
..................................................................TGTCAACATCCTACCCTCTCAGC.................................................................................................... 23 2 2 7.50 15 14 1 0
...................................................................GTAAACATCCTACACTCTCAGTT................................................................................................... 23 1 3 7.33 22 22 0 0
..................................................................TGTAAACATCCTACACTCTCAGTAT.................................................................................................. 25 3 3 7.33 22 22 0 0
..................................................................TGTAAACATCCTAAACTCTCAGCTAA................................................................................................. 26 3 2 7.00 14 14 0 0
..................................................................TGTAAACCTCCTACACTCTCAGC.................................................................................................... 23 1 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTATACTCTCAGCTA.................................................................................................. 25 2 2 7.00 14 14 0 0
...................................................................GTAAACATCCTACACTCTCAGCTTAT................................................................................................ 26 3 2 7.00 14 14 0 0
..................................................................TGTAAACATCCCACACTCTCAGCTA.................................................................................................. 25 2 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTACACTCTCCGC.................................................................................................... 23 1 2 7.00 14 14 0 0
..................................................................TGTCAACATCCTACACTCTCAGCAA.................................................................................................. 25 3 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTAAACTCTCAACT................................................................................................... 24 2 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTCT................................................................................................. 26 1 2 7.00 14 14 0 0
...................................................................GTAAACATCCTACACTCTCAGCTG.................................................................................................. 24 0 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTTCACTCTCAGCT................................................................................................... 24 1 2 7.00 14 14 0 0
..................................................................TGTAAAAATCCTACACTCTCAGCTT.................................................................................................. 25 2 2 7.00 14 13 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTTTAAT.............................................................................................. 29 3 2 7.00 14 14 0 0
...................................................................GTAAACATCCTACTCTCTCAGCT................................................................................................... 23 1 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTACACTCTCCGCTA.................................................................................................. 25 2 2 7.00 14 14 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTGT................................................................................................ 27 3 2 6.50 13 13 0 0
..................................................................TGTAAACATCCTACACTCTCATCTT.................................................................................................. 25 2 2 6.50 13 13 0 0
..................................................................TGTAAACATCCTACACTCTCAGTTT.................................................................................................. 25 2 2 6.50 13 13 0 0
..................................................................TGTAAACATCCTACACTCTCAGATT.................................................................................................. 25 2 2 6.50 13 13 0 0
..................................................................TGTAAACATCCTACACTCTCAGATA.................................................................................................. 25 2 2 6.50 13 13 0 0
..................................................................TGTAAACCTCCTACACTCTCAGCTT.................................................................................................. 25 2 2 6.50 13 13 0 0
..................................................................TGTCAACATCCTACACTCTCAG..................................................................................................... 22 1 2 6.50 13 13 0 0
..................................................................TGTAAACATCTTACACTCTCAGCTT.................................................................................................. 25 2 2 6.50 13 13 0 0
.................................................................ATGTAAACATCCTACACTCTCAGT.................................................................................................... 24 2 2 6.00 12 8 0 4
..................................................................TGTAAACATCCTACCCTCTCAGCAA.................................................................................................. 25 3 2 6.00 12 12 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTG................................................................................................. 26 2 2 6.00 12 11 0 1
.................................................................ATGTAAACATCCTACACTCTCGGCT................................................................................................... 25 2 2 6.00 12 12 0 0
..................................................................TGTAAACATCCTACACTCTCAGCCT.................................................................................................. 25 2 2 6.00 12 12 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTTAG................................................................................................ 27 2 2 6.00 12 12 0 0
...................................................................GTAAACATCCTACACTCTCAGCG................................................................................................... 23 1 2 6.00 12 12 0 0
..................................................................TGTCAACATCCCACACTCTCAGCT................................................................................................... 24 2 2 6.00 12 12 0 0
..................................................................TGTAAACATCCAACACTCTCAGC.................................................................................................... 23 1 2 6.00 12 12 0 0
..................................................................TGTAAACATCCTACACTCTCACCTTT................................................................................................. 26 2 2 6.00 12 11 1 0
..................................................................TGTAAACATCCTACACTCTCAGCTTCT................................................................................................ 27 3 2 6.00 12 12 0 0
..................................................................TGTAAACATCCCACACTCTCAGCTT.................................................................................................. 25 2 2 6.00 12 12 0 0
...............................................................GCTTGTAAACATCCTACACTCTCA...................................................................................................... 24 2 1 6.00 6 6 0 0
..................................................................TGTAAACATCCCACACTCTCAGTT................................................................................................... 24 2 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACACCCTCCGCT................................................................................................... 24 2 2 5.50 11 11 0 0
..................................................................TGTAAACAACCTACCCTCTCAGCT................................................................................................... 24 2 2 5.50 11 11 0 0
.................................................................ATGTAAACATCCTACACTCTCAGCAT.................................................................................................. 26 3 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACACTCTCAACA................................................................................................... 24 2 2 5.50 11 11 0 0
.................................................................ATGTAAACATCCTACACTCTCAGTA................................................................................................... 25 3 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTAAACTCTCAGCA................................................................................................... 24 2 2 5.50 11 11 0 0
..................................................................TGTAAACATCCCACACTCTCAGAT................................................................................................... 24 2 2 5.50 11 11 0 0
..................................................................TGTAAACATCCAACACTCTCAGCTAT................................................................................................. 26 2 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACCCTCTCAGCTAA................................................................................................. 26 3 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACACTCTCT...................................................................................................... 21 1 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACACTCTCAGCATTT................................................................................................ 27 3 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACACTCTCATC.................................................................................................... 23 1 2 5.50 11 11 0 0
...................................................................GTAAACATCCTACACTCTCAGCTTA................................................................................................. 25 2 2 5.50 11 11 0 0
..................................................................TGTAAACATCCCACACTCTCAGC.................................................................................................... 23 1 2 5.50 11 11 0 0
...................................................................GTAAACATCCTACACTCTCAGCTTTA................................................................................................ 26 2 2 5.50 11 11 0 0
..................................................................TGTAAACATCCTACCCTCTCAGA.................................................................................................... 23 2 3 5.33 16 16 0 0
...................................................................GTAAACATCCTACACTCTCAGCTAAA................................................................................................ 26 3 3 5.33 16 16 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATAAT.............................................................................................. 29 3 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTACACTCACAGCTT.................................................................................................. 25 2 2 5.00 10 10 0 0
.................................................................TTGTAAACATCCTACACTCTCAGCTA.................................................................................................. 26 2 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTACACTCTCACCA................................................................................................... 24 2 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTACACTCTCAGAG................................................................................................... 24 2 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTGTAT............................................................................................... 28 2 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTACACTCTCAGCTATTAT.............................................................................................. 29 3 2 5.00 10 10 0 0
.........................................................................ATCCTACACTCTCAGCTGTAAAC............................................................................................. 23 2 2 5.00 10 8 0 2
..................................................................TGTAAACATCTTACACTCTCAGCTA.................................................................................................. 25 2 2 5.00 10 10 0 0
..................................................................TGCCAACATCCTACACTCTCAGCTT.................................................................................................. 25 3 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTACACTCTCAACTTT................................................................................................. 26 2 2 5.00 10 10 0 0
.............................................................GAGTGTGTAAACATCCTACACTCTCAGCT................................................................................................... 29 1 1 5.00 5 5 0 0
..................................................................CGTAAACATCCTACACTCTCAGC.................................................................................................... 23 1 2 5.00 10 10 0 0
..................................................................TGTAAACATCCTATACTCTCAGCTAT................................................................................................. 26 2 2 5.00 10 10 0 0

Anti-sense strand reads

ACTCTACGACTAGAGATCCACCAGTCTCCGGATGTTCGGGGAACCGATATTGGTACAACATCACACACATTTGTAGGATGTGAGAGTCGACACTCGAGTTCCACCGACCCTCTCCCAACAAATGAGGAAGACGGTACCTTTTGCAGTCGAACTTCTTGTTAGAGAAGTGGGTTGTCTAGCCTGTCTTAC
***********************************************(((((..((((.....(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).....)))))))))....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:46 PM