ID:

rno-mir-30a

 Coordinate:

chr9:29542635-29542705 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-49.4 -48.5 -48.5

Sense Strand Reads

CAGGTCAGTAAGACAGAATGCTGAAGAAGACATATCAATGTTGACAGTGAGCAACTGTAAACATCCTCGACTGGAAGCTGTGAAGCCACAAATGGGCTTTCAGTCGGATGTTTGCAGCTGCCTACTGTCTCCAACTTCAAGGAGCAATTATCTTGTTGGCTGAAACCAATA
****************************************..(((((((.(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).))).)))))))....************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.......................................................TGTAAACATCCTCGACTGGAAGCT............................................................................................ 24 0 1 20654.00 20654 20168 419 67
.......................................................TGTAAACATCCTCGACTGGAAGC............................................................................................. 23 0 1 4100.00 4100 3670 406 24
.......................................................TGTAAACATCCTCGACTGGAAGCTT........................................................................................... 25 1 1 3097.00 3097 3004 74 19
.......................................................TGTAAACATCCTCGACTGGAAG.............................................................................................. 22 0 1 1147.00 1147 922 208 17
........................................................GTAAACATCCTCGACTGGAAGCT............................................................................................ 23 0 1 949.00 949 920 26 3
.......................................................TGTAAACATCCTCGACTGGAAGCTA........................................................................................... 25 1 1 812.00 812 810 1 1
.......................................................TGTAAACATCCTCGACTGGAAGCTTT.......................................................................................... 26 1 1 732.00 732 700 32 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAT.......................................................................................... 26 1 1 731.00 731 721 5 5
.......................................................TGTAAACATCCTCGACTGGAA............................................................................................... 21 0 1 640.00 640 324 316 0
.......................................................TGTAAACATCCTCGACTGGAAGCA............................................................................................ 24 1 1 528.00 528 522 5 1
................................................................................................CTTTCAGTCGGATGTTTGCAGC..................................................... 22 0 1 446.00 446 130 316 0
.......................................................TGTAAACATCCTCGACTGGA................................................................................................ 20 0 1 388.00 388 85 303 0
.......................................................TGTAAACATCCTCGACTGGAAGA............................................................................................. 23 1 1 297.00 297 283 14 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAA.......................................................................................... 26 2 1 295.00 295 295 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTT......................................................................................... 27 2 1 282.00 282 264 15 3
......................................................ATGTAAACATCCTCGACTGGAAGCT............................................................................................ 25 1 1 267.00 267 233 34 0
..............................................................ATCCTCGACTGGAAGC............................................................................................. 16 0 1 265.00 265 2 263 0
.......................................................TGTAAACATCCTCGACTGGAAGT............................................................................................. 23 1 1 232.00 232 222 9 1
........................................................GTAAACATCCTCGACTGGAAGC............................................................................................. 22 0 1 216.00 216 183 33 0
................................................................................................CTTTCAGTCGGATGTTTACAGTT.................................................... 23 2 2 193.00 386 356 2 28
........................................................GTAAACATCCTCGACTGGAAGCTT........................................................................................... 24 1 1 178.00 178 177 1 0
.......................................................TGTCAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 174.00 174 173 0 1
..............................................................ATCCTCGACTGGAAGCT............................................................................................ 17 0 1 168.00 168 3 165 0
.......................................................TGTAAACATCCTCGCCTGGAAGCT............................................................................................ 24 1 1 151.00 151 149 1 1
.......................................................TGTAAACATCCTCGACTGGAAGCTTAT......................................................................................... 27 3 1 140.00 140 140 0 0
.......................................................TGTAAACATCCTCGACTGGAAA.............................................................................................. 22 1 1 135.00 135 91 44 0
................................................................................................CTTTCAGTCGGATGTTTGCAG...................................................... 21 0 1 121.00 121 94 27 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTA.......................................................................................... 26 2 1 104.00 104 103 0 1
................................................................................................CTTTCAGTCGGATGTTTGCAGT..................................................... 22 1 1 102.00 102 65 27 10
.............................................................CATCCTCGACTGGAAGC............................................................................................. 17 0 1 100.00 100 8 92 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTTT........................................................................................ 28 3 1 88.00 88 82 5 1
......................................................TTGTAAACATCCTCGACTGGAAGC............................................................................................. 24 1 1 80.00 80 80 0 0
......................................................ATGTAAACATCCTCGACTGGAAGC............................................................................................. 24 1 1 79.00 79 59 20 0
.............................................................CATCCTCGACTGGAAGCT............................................................................................ 18 0 1 79.00 79 18 61 0
................................................................................................CTTTCAGTCGGATGTTTGCAGCA.................................................... 23 1 1 66.00 66 55 7 4
.......................................................TGTAAACATCCTCGACTGGAAGCAA........................................................................................... 25 2 1 60.00 60 60 0 0
.............................................................CATCCTCGACTGGAA............................................................................................... 15 0 1 60.00 60 1 59 0
.......................................................TGTAAACATCCTCGACTGGAAGCAT........................................................................................... 25 2 1 55.00 55 53 1 1
................................................................................................CTTTCAGTCGGATGTTTGCA....................................................... 20 0 1 54.00 54 28 26 0
........................................................GTAAACATCCTCGACTGGAAGCTA........................................................................................... 24 1 1 54.00 54 53 1 0
........................................................GTAAACATCCTCGACTGGAAG.............................................................................................. 21 0 1 51.00 51 36 15 0
.......................................................TGTAAACATCCTCGACTGGAACCT............................................................................................ 24 1 1 48.00 48 48 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTATT......................................................................................... 27 2 1 48.00 48 47 1 0
.......................................................TGTAAACATCATCGACTGGAAGCT............................................................................................ 24 1 1 46.00 46 45 1 0
.......................................................TGTAAACATCCACGACTGGAAGCT............................................................................................ 24 1 2 44.00 88 86 0 2
.......................................................TGTAAACATCCTCAACTGGAAGCT............................................................................................ 24 1 1 43.00 43 42 0 1
.......................................................TGTCAACATCCTCGACTGGAAGC............................................................................................. 23 1 1 42.00 42 42 0 0
.......................................................TGTAAACATCCTCGACTGGAAT.............................................................................................. 22 1 1 42.00 42 31 10 1
.......................................................TGTAAACATCCTCGACTGGAAACT............................................................................................ 24 1 1 42.00 42 42 0 0
.......................................................TGTCAACATCCTCGACTGGAAGCTT........................................................................................... 25 2 1 37.00 37 35 0 2
........................................................GTAAACATCCTCGACTGGAAGCTTT.......................................................................................... 25 1 1 36.00 36 32 1 3
.......................................................TGTAAACATCCTCGACTGGAAGCTAAT......................................................................................... 27 3 1 35.00 35 34 0 1
.......................................................TGTAAACATCCTCGACTGGAAGCC............................................................................................ 24 1 1 35.00 35 33 2 0
.......................................................TGTAAACATCCTCGACTGG................................................................................................. 19 0 1 33.00 33 15 18 0
......................................................ATGTAAACATCCTCGACTGGAAGCTT........................................................................................... 26 2 1 32.00 32 27 5 0
.......................................................TGTAAACATCCTCCACTGGAAGCT............................................................................................ 24 1 1 32.00 32 32 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAGCAT................................................... 24 2 1 32.00 32 28 4 0
.......................................................TGTAAACATCCTCGACTGGAAAA............................................................................................. 23 2 1 31.00 31 22 9 0
..............................................................ATCCTCGACTGGAAG.............................................................................................. 15 0 2 31.00 62 0 62 0
.............................................................CATCCTCGACTGGAAG.............................................................................................. 16 0 1 31.00 31 1 30 0
........................................................GTAAACATCCTCGACTGGAA............................................................................................... 20 0 1 30.00 30 14 16 0
......................................................ATGTAAACATCCTCGACTGGAA............................................................................................... 22 1 1 29.00 29 0 29 0
.......................................................TGTAAACATCCTCGACTGGAAGAA............................................................................................ 24 2 1 29.00 29 29 0 0
.......................................................TGTAAACATCCTCGACTGGACGCT............................................................................................ 24 1 1 27.00 27 25 1 1
................................................................................................CTTTCAGTCGGATGTTTGCAGTT.................................................... 23 1 1 27.00 27 26 1 0
........................................................GTAAACATCCTCGACTGGAAGCTAT.......................................................................................... 25 1 1 26.00 26 26 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTATTT........................................................................................ 28 3 1 26.00 26 26 0 0
................................................................................................CTTTCAGTCGGATGTTTGC........................................................ 19 0 1 25.00 25 5 20 0
.....................................................AATGTAAACATCCTCGACTGGAAGCT............................................................................................ 26 1 1 25.00 25 25 0 0
......................................................ATGTAAACATCCTCGACTGGAAG.............................................................................................. 23 1 1 24.00 24 7 17 0
.......................................................TGTAAACATCCTCGACTGGAAGCCT........................................................................................... 25 2 1 24.00 24 23 1 0
.......................................................TGTAAACATCCTCGCCTGGAAGC............................................................................................. 23 1 1 24.00 24 23 1 0
.......................................................TGTAAACATCCTCGACTGGAAGCG............................................................................................ 24 1 1 24.00 24 24 0 0
.................................................................................................TTTCAGTCGGATGTTTGCAGT..................................................... 21 1 1 23.00 23 14 3 6
................................................................................................CTTTCAGTCGGATGTTTGCAGCAA................................................... 24 2 1 23.00 23 23 0 0
.......................................................TGCAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 23.00 23 19 4 0
.......................................................TGTAAACATCCTCGCCTGGAAGCTT........................................................................................... 25 2 1 23.00 23 22 0 1
.......................................................TGTAAACATCCTCGACTGGAAGCTGT.......................................................................................... 26 0 1 22.00 22 21 1 0
................................................................................................CTTTCAGTCGGATGTTTGCAGA..................................................... 22 1 1 22.00 22 8 14 0
................................................................................................CTTTCAGTCGGATGTTTGCAGCT.................................................... 23 0 1 22.00 22 20 2 0
.......................................................TGTCAACATCCTCGCCTGGAAGCT............................................................................................ 24 2 1 22.00 22 22 0 0
.......................................................TGTAAACATCCTCGGCTGGAAGCT............................................................................................ 24 1 1 22.00 22 21 1 0
.................................................................................................TTTCAGTCGGATGTTTGCAGC..................................................... 21 0 1 22.00 22 8 13 1
.......................................................TGTAAACATCCTCGACTGGAAGCTG........................................................................................... 25 0 1 21.00 21 21 0 0
............................................................ACATCCTCGACTGGAAGCT............................................................................................ 19 0 1 21.00 21 4 17 0
.......................................................TGTAAACATCCTCGACTGGAAGAT............................................................................................ 24 1 1 21.00 21 21 0 0
........................................................GTAAACATCCTCGACTGGAAGCA............................................................................................ 23 1 1 20.00 20 20 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAAA......................................................................................... 27 3 3 19.33 58 58 0 0
.......................................................TGTAAACATCCTCGACTGGAATCT............................................................................................ 24 1 1 19.00 19 16 2 1
........................................................GTAAACATCCTCGACTGGA................................................................................................ 19 0 1 19.00 19 4 15 0
.......................................................TGTAAACATCCTCGACTGGAAGCTGA.......................................................................................... 26 1 1 19.00 19 19 0 0
................................................................................................CTTTCAGTCGGATGTTTACAGCT.................................................... 23 1 2 18.50 37 34 3 0
................................................................................................CTTTCAGTCGGATGTTTACAGTTT................................................... 24 3 3 18.33 55 36 0 19
.......................................................TGTAAACATCTTCGACTGGAAGCT............................................................................................ 24 1 1 18.00 18 18 0 0
..........................................................AAACATCCTCGACTGGAAGCT............................................................................................ 21 0 1 18.00 18 12 6 0
.................................................................................................TTTCAGTCGGATGTTTGCAG...................................................... 20 0 1 18.00 18 18 0 0
........................................................GTAAACATCCTCGCCTGGAAGCT............................................................................................ 23 1 1 17.00 17 17 0 0
.......................................................TGTAAACATCGTCGACTGGAAGCT............................................................................................ 24 1 1 17.00 17 16 1 0
...........................................................AACATCCTCGACTGGAAGCT............................................................................................ 20 0 1 17.00 17 6 11 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTAT........................................................................................ 28 3 3 16.67 50 49 0 1
.....................................................AATGTAAACATCCCCGACTGGAAGCT............................................................................................ 26 2 2 16.50 33 33 0 0
.......................................................TGCCAACATCCTCGACTGGAAGCT............................................................................................ 24 2 1 16.00 16 16 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAG.......................................................................................... 26 2 1 16.00 16 16 0 0
......................................................ATGTAAACATCCTCGACTGGA................................................................................................ 21 1 1 16.00 16 0 16 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCAA................................................... 23 2 1 16.00 16 16 0 0
.....................................................GCTGTAAACATCCTCGACTGGAA............................................................................................... 23 1 1 16.00 16 15 1 0
.......................................................TGTAAACATCCTCGACTGGAACC............................................................................................. 23 1 1 16.00 16 15 0 1
.......................................................TGTAAACCTCCTCGACTGGAAGCT............................................................................................ 24 1 1 16.00 16 16 0 0
.......................................................TGTAAACATCCTCGACCGGAAGCT............................................................................................ 24 1 1 15.00 15 15 0 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCT.................................................... 22 0 1 15.00 15 13 2 0
........................................................GTAAACATCCTCGACTGGAAGT............................................................................................. 22 1 1 15.00 15 15 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTC.......................................................................................... 26 2 1 15.00 15 15 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTAA......................................................................................... 27 3 3 14.67 44 44 0 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCTT................................................... 23 1 1 14.00 14 14 0 0
......................................................ATGTAAACATCCTCGACTGGAAGCTTT.......................................................................................... 27 2 1 14.00 14 13 1 0
.......................................................TGTAAACATCCTTGACTGGAAGCTAAGA........................................................................................ 28 3 2 14.00 28 27 1 0
....................................................AAATGTAAACATCCCCGACTGGAAGCT............................................................................................ 27 2 1 14.00 14 14 0 0
............................................................ACATCCTCGACTGGAA............................................................................................... 16 0 1 14.00 14 0 14 0
........................................................GTAAACATCCTCGACTGGAAGCTTTT......................................................................................... 26 2 1 14.00 14 14 0 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCTA................................................... 23 1 1 14.00 14 14 0 0
........................................................GTAAACATCCTCGACTGGAAGCTTA.......................................................................................... 25 2 1 14.00 14 14 0 0
.............................................................CATCCTCGACTGGAAGCTCG.......................................................................................... 20 2 2 13.00 26 0 0 26
...........................................................AACATCCTCGACTGGAAGC............................................................................................. 19 0 1 13.00 13 0 13 0
.......................................................TGTAAACATCCTCGACTGGAAGTA............................................................................................ 24 2 1 13.00 13 13 0 0
.......................................................TGTCAACATCCTCGACAGGAAGCT............................................................................................ 24 2 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTC........................................................................................... 25 1 1 13.00 13 11 2 0
.......................................................TGTAAACATCCTCGCCTGGAAGCTA........................................................................................... 25 2 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTTA........................................................................................ 28 2 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGACTGGAAGTT............................................................................................ 24 1 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGACTGAAAGCT............................................................................................ 24 1 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGATTGGAAGCT............................................................................................ 24 1 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGACTCGAAGCT............................................................................................ 24 1 1 13.00 13 13 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTA......................................................................................... 27 2 3 12.00 36 36 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAGAA.................................................... 23 2 1 12.00 12 11 1 0
.......................................................TGTAAACATCCTTGACTGGAAGCTAAG......................................................................................... 27 3 2 12.00 24 24 0 0
........................................................GTAAACATCCTCGACTGGAAGA............................................................................................. 22 1 1 12.00 12 11 1 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCTAT.................................................. 24 2 1 12.00 12 12 0 0
................................................................................................CTTTCAGTCGGATGTTTACAGTTA................................................... 24 3 2 11.50 23 23 0 0
......................................................ATGTAAACATCCTCGACTGGAAGCTA........................................................................................... 26 2 1 11.00 11 10 1 0
................................................................................................CTTTCAGTCGGATGTTTGCAGTTT................................................... 24 2 1 11.00 11 11 0 0
.......................................................TGTCAACATCCTCGACTGGAAG.............................................................................................. 22 1 1 11.00 11 11 0 0
........................................................GTACACATCCTCGACTGGAAGCT............................................................................................ 23 1 1 11.00 11 11 0 0
.......................................................TCTAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 11.00 11 10 1 0
.............................................................CATCCTCGACTGGAAGCTGTAAA....................................................................................... 23 1 1 11.00 11 10 1 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCTTAT................................................. 25 3 1 11.00 11 1 0 10
.......................................................TGTAAACATCCTCGACTGGAAGGT............................................................................................ 24 1 1 11.00 11 11 0 0
.......................................................TGTCAACATCCACGACTGGAAGCT............................................................................................ 24 2 2 11.00 22 22 0 0
......................................................ATGTAAACATCCTCGACTGG................................................................................................. 20 1 1 11.00 11 1 10 0
.......................................................CGTAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 11.00 11 11 0 0
.......................................................TGTAAAAATCCTCGACTGGAAGCT............................................................................................ 24 1 1 11.00 11 11 0 0
.......................................................CGTCAACATCCTCGACTGGAAGCT............................................................................................ 24 2 1 11.00 11 11 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTTAT....................................................................................... 29 3 1 11.00 11 11 0 0
..........................................................AAACATCCTCGACTGGAAGC............................................................................................. 20 0 1 11.00 11 6 5 0
....................................................AAATGTAAACATCCTTGACTGGAAGCT............................................................................................ 27 2 2 10.00 20 20 0 0
.........................................................TAAACATCCTCGACTGGAAGCT............................................................................................ 22 0 1 10.00 10 10 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAGTA.................................................... 23 2 1 10.00 10 10 0 0
.......................................................TGTAAACATCCTCGACTGGGAGCT............................................................................................ 24 1 1 10.00 10 10 0 0
.......................................................TGTAAACATCCTCGACTTGAAGCT............................................................................................ 24 1 1 10.00 10 10 0 0
........................................................GTAAACATCCTCGACTGGAAGCTAAT......................................................................................... 26 3 1 10.00 10 10 0 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCA.................................................... 22 1 1 10.00 10 10 0 0
.......................................................TGTCAACATCCTCGACTGGAAGCTTT.......................................................................................... 26 2 1 10.00 10 10 0 0
.......................................................TGTAAACATCATCGACTGGAAGCTT........................................................................................... 25 2 1 10.00 10 10 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCCA........................................................................................... 25 2 1 10.00 10 10 0 0
.......................................................TGGAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 10.00 10 8 2 0
......................................................TTGTAAACATCCTCGACTGGAAGCT............................................................................................ 25 1 1 10.00 10 9 1 0
................................................................................................CTTTCAGTCGGATGTTTG......................................................... 18 0 1 10.00 10 1 1 8
.......................................................TGTAAACATCCACGCCTGGAAGCT............................................................................................ 24 2 2 9.50 19 19 0 0
.......................................................TGAAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 9.00 9 8 1 0
................................................................................................CTTTCAGTCGGATGTTTGCAGCTT................................................... 24 1 1 9.00 9 8 1 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAC.......................................................................................... 26 2 1 9.00 9 8 0 1
............................................................ACATCCTCGACTGGAAGC............................................................................................. 18 0 1 9.00 9 1 8 0
.......................................................TGTCAACATCCTCGACTGGAAGCA............................................................................................ 24 2 1 9.00 9 9 0 0
.......................................................TGACAACATCCTCGACTGGAAGCT............................................................................................ 24 2 1 9.00 9 9 0 0
......................................................ATGTAAACATCCTCGACTGGAAGCTAT.......................................................................................... 27 2 1 9.00 9 8 1 0
.................................................................................................TTTCAGTCGGATGTTTACAGTT.................................................... 22 2 2 9.00 18 18 0 0
.......................................................TGTAAACATCATCGACTGGAAGC............................................................................................. 23 1 1 9.00 9 9 0 0
...........................................................AACATCCTCGACTGGAA............................................................................................... 17 0 1 9.00 9 0 9 0
.............................................................CATCCTCGACTGGAAGCTT........................................................................................... 19 1 2 9.00 18 6 12 0
.......................................................TGTAAACATCCTCGACTGGAAACTT........................................................................................... 25 2 1 9.00 9 9 0 0
.......................................................TATAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 9.00 9 8 1 0
.......................................................TGTAAACATACTCGACTGGAAGCT............................................................................................ 24 1 1 9.00 9 8 1 0
.......................................................TGTAAACATTCTCGACTGGAAGCT............................................................................................ 24 1 1 9.00 9 8 0 1
........................................................GTAAACATCCTCGACTGGCAGCT............................................................................................ 23 1 1 9.00 9 9 0 0
.......................................................TGTAAACATCCTCGACTGGAATC............................................................................................. 23 1 1 9.00 9 7 2 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTAA........................................................................................ 28 2 3 8.67 26 26 0 0
.......................................................TGTAAACATCCTAGACTGGAAGCT............................................................................................ 24 1 2 8.50 17 17 0 0
..............................................................ATCCTCGACTGGAAGCTT........................................................................................... 18 1 3 8.33 25 2 23 0
..............................................................ATCCTCGACTGGAAGCTCG.......................................................................................... 19 2 3 8.33 25 0 0 25
.......................................................TGTAAACATCCTCGACTGGAAC.............................................................................................. 22 1 1 8.00 8 6 2 0
...............................................................................................ACTTTCAGTCGGATGTTTGCAGC..................................................... 23 1 1 8.00 8 2 6 0
...............................................................................................ACTTTCAGTCGGATGTTTGCAGT..................................................... 23 2 1 8.00 8 5 3 0
.......................................................TGTAAACATCCTCGACTGTAAGCT............................................................................................ 24 1 1 8.00 8 8 0 0
................................................................................................CTTTCAGTCGGATGTTTACAGAT.................................................... 23 2 2 8.00 16 16 0 0
........................................................GTAAACATCCTCGACTGGAAA.............................................................................................. 21 1 1 8.00 8 4 4 0
.......................................................TGTAAACATCCTCGAATGGAAGCT............................................................................................ 24 1 1 8.00 8 8 0 0
............................................................ACATCCTCGACTGGA................................................................................................ 15 0 1 8.00 8 0 8 0
......................................................ATGTAAACATCCTCGACTGGAAGCTTTT......................................................................................... 28 3 1 8.00 8 7 1 0
....................................................GCTTGTAAACATCCTCGACTGGAA............................................................................................... 24 3 2 8.00 16 16 0 0
........................................................GTAAACATCCTCGACTGGAAGCTATT......................................................................................... 26 2 1 8.00 8 8 0 0
........................................................GTAAACATCCTCGACTGGAAGAT............................................................................................ 23 1 1 8.00 8 8 0 0
.......................................................TGTCAACATCCTCGACTGGAAGCTAT.......................................................................................... 26 2 1 8.00 8 8 0 0
.......................................................TGTAACCATCCTCGACTGGAAGCT............................................................................................ 24 1 1 8.00 8 8 0 0
.......................................................TGTACACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 8.00 8 8 0 0
..............................................................ATCCTCGACTGGAAGCTGTAAAC...................................................................................... 23 2 3 7.67 23 14 9 0
.......................................................TGTAAACATCCTCGACTGGAAGCTATA......................................................................................... 27 2 3 7.33 22 22 0 0
.......................................................TGTAAACATCCTCGACTGGCAGCT............................................................................................ 24 1 1 7.00 7 7 0 0
..........................................................AAACATCCTCGACTGGAA............................................................................................... 18 0 1 7.00 7 0 7 0
........................................................GTAAACATCCTCGACTGGAAGATT........................................................................................... 24 2 1 7.00 7 7 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAA...................................................... 21 1 1 7.00 7 5 2 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAAGA........................................................................................ 28 2 1 7.00 7 6 1 0
.......................................................TGTAAACACCCTCGACTGGAAGCT............................................................................................ 24 1 1 7.00 7 7 0 0
.......................................................TGTCAACATCCTCGCCTGGAAGC............................................................................................. 23 2 1 7.00 7 7 0 0
........................................................GTAAACATCCTCGACTGGAAGCTAA.......................................................................................... 25 2 1 7.00 7 7 0 0
.......................................................TGTAAACATCCTCGACTAGAAGCT............................................................................................ 24 1 1 7.00 7 7 0 0
......................................................ATGTAAACATCCTCGACTGGAAA.............................................................................................. 23 2 1 7.00 7 0 7 0
........................................................GTAAACATCCTCGACTGGAAGTT............................................................................................ 23 1 1 7.00 7 7 0 0
..............................................................ATCCTCGACTGGAAGCTTT.......................................................................................... 19 1 1 7.00 7 1 6 0
.......................................................TGTAAACATCCTCGACTGGAAAC............................................................................................. 23 1 1 7.00 7 7 0 0
..........................................................AAACATCCTCGACTGGAAGCTTT.......................................................................................... 23 1 1 7.00 7 6 1 0
.......................................................TGTAAACATCCTCGCCTGGAAGCTAT.......................................................................................... 26 2 1 7.00 7 7 0 0
.......................................................TGCAAACATCCTCGACTGGAAGC............................................................................................. 23 1 1 7.00 7 6 1 0
.......................................................TGTAAACATCCTCGACTGGAAGCTCT.......................................................................................... 26 1 1 7.00 7 7 0 0
.......................................................TGTCAACATCCTCGACTGGAA............................................................................................... 21 1 1 7.00 7 7 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAGCTA................................................... 24 1 1 7.00 7 7 0 0
...................................................AAAATGTAAACATCCTCGACTGGAAGCT............................................................................................ 28 2 1 7.00 7 7 0 0
.......................................................TGTAAACAACCTCGACTGGAAGCT............................................................................................ 24 1 1 7.00 7 7 0 0
...............................................................TCCTCGACTGGAAGCT............................................................................................ 16 0 1 7.00 7 0 7 0
............................................................ACATCCTCGACTGGAAG.............................................................................................. 17 0 1 7.00 7 1 6 0
.......................................................TGTAAACATCCTCGACTGGAAGAAA........................................................................................... 25 3 1 7.00 7 5 2 0
....................................................AAATGTAAACATCCTTGACTGGAA............................................................................................... 24 2 2 7.00 14 14 0 0
.......................................................TGTAAACATCCTCGACCGGAAGC............................................................................................. 23 1 1 7.00 7 6 1 0
.......................................................TGTAAACATCCTCGACTGGAAGTAA........................................................................................... 25 3 1 7.00 7 7 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAAAA........................................................................................ 28 3 3 6.67 20 20 0 0
.......................................................TGTAAACATCCACGACTGGAAGCTT........................................................................................... 25 2 2 6.50 13 13 0 0
.......................................................TGTAAACATCCGCGACTGGAAGCT............................................................................................ 24 1 2 6.50 13 13 0 0
.......................................................TGTCAACATCCTCGACTGGAAGCTAA.......................................................................................... 26 3 1 6.00 6 6 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTATTAT....................................................................................... 29 3 1 6.00 6 6 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTAAGT........................................................................................ 28 3 1 6.00 6 5 1 0
.......................................................TGTAAACATCCTCGACTGGAACCTA........................................................................................... 25 2 1 6.00 6 6 0 0
.......................................................TTTAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 6.00 6 5 1 0
.........................................................TAAACATCCTCGACTGGAAGCTT........................................................................................... 23 1 1 6.00 6 5 1 0
.......................................................TGTAAACATCCTCGCCTGGAA............................................................................................... 21 1 1 6.00 6 5 1 0
.......................................................TGTAAACATCCTCGCCTGGAAG.............................................................................................. 22 1 1 6.00 6 5 0 1
.......................................................TGTTAACATCCTCGCCTGGAAGCT............................................................................................ 24 2 1 6.00 6 6 0 0
.................................................................................................TTTCAGTCGGATGTTTGCAGCAT................................................... 23 2 1 6.00 6 6 0 0
.......................................................TGTAAACATCTTCGACTGGAAGC............................................................................................. 23 1 1 6.00 6 4 2 0
.......................................................GGTAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 6.00 6 6 0 0
.......................................................TGTCAACATCCTCGACTGGAAGCTA........................................................................................... 25 2 1 6.00 6 6 0 0
........................................................GTAAACATCCTCGACTGGAAGCTTTTT........................................................................................ 27 3 1 6.00 6 6 0 0
......................................................ATGTAAACATCCTCGACTGGAAGCA............................................................................................ 25 2 1 6.00 6 5 1 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTG......................................................................................... 27 1 1 6.00 6 5 1 0
...................................................AAAATGTAAACATCCCCGACTGGAAGCT............................................................................................ 28 3 1 6.00 6 6 0 0
.......................................................TGTAAACATCCTCGCCTGGAAGCTTT.......................................................................................... 26 2 1 6.00 6 6 0 0
.......................................................TGTAAACATCCTCTACTGGAAGCT............................................................................................ 24 1 1 6.00 6 6 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTAG......................................................................................... 27 2 1 6.00 6 6 0 0
.......................................................TGTAAACATCCTCGACTGGAACCTT........................................................................................... 25 2 1 6.00 6 6 0 0
.......................................................TGTAAACATCCACGACTGGAAGC............................................................................................. 23 1 2 5.50 11 10 0 1
........................................................GTAAACATCCTCGACTGGAAT.............................................................................................. 21 1 1 5.00 5 4 1 0
........................................................GTAAACATCCTCGACTGGAAGCCT........................................................................................... 24 2 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCGACTGCAAGCT............................................................................................ 24 1 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCAACTGGAAGC............................................................................................. 23 1 1 5.00 5 3 0 2
.......................................................TGTAAACATCCTCGACTGAAAGC............................................................................................. 23 1 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTGT......................................................................................... 27 3 1 5.00 5 5 0 0
.......................................................TGTAAACAGCCTCGACTGGAAGCT............................................................................................ 24 1 1 5.00 5 5 0 0
.....................................................CTTGTAAACATCCTCGACTGGAAG.............................................................................................. 24 2 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCGACTGTAAGC............................................................................................. 23 1 1 5.00 5 1 4 0
.......................................................TGTAAACATCATCGACTGGAAGCTTT.......................................................................................... 26 2 1 5.00 5 5 0 0
......................................................ATGTAAACATCCTCGACTGGACGCT............................................................................................ 25 2 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCGA........................................................................................... 25 2 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTATAT........................................................................................ 28 3 3 5.00 15 15 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAGTAT................................................... 24 3 1 5.00 5 5 0 0
...........................................................AACATCCTCGACTGGAAGCTT........................................................................................... 21 1 1 5.00 5 2 3 0
.............................................................CATCCTCGACTGGAAGCTAT.......................................................................................... 20 1 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTCGACTGGAAGAAT........................................................................................... 25 3 1 5.00 5 5 0 0
................................................................................................CTGTCAGTCGGATGTTTGCAGC..................................................... 22 1 1 5.00 5 0 5 0
........................................................GTAAACATCCTCGACTGGAAGCAA........................................................................................... 24 2 1 5.00 5 5 0 0
...............................................................TCCTCGACTGGAAGC............................................................................................. 15 0 1 5.00 5 0 5 0
.......................................................TGTGAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 5.00 5 5 0 0
.......................................................AGTAAACATCCTCGACTGGAAGCT............................................................................................ 24 1 1 5.00 5 5 0 0
......................................................ATGTAAACATCCTCGACTGGAAGA............................................................................................. 24 2 1 5.00 5 3 2 0
.......................................................TGTGAACATCCTCGCCTGGAAGCT............................................................................................ 24 2 1 5.00 5 5 0 0
......................................................GTGTAAACATCCTCGACTGGAA............................................................................................... 22 1 1 5.00 5 5 0 0
.......................................................TGTAAACATCCTTGACTGGAAGCTTAGA........................................................................................ 28 3 2 5.00 10 10 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCATT.......................................................................................... 26 2 1 5.00 5 4 1 0
...........................................................AACATCCTCGACTGGA................................................................................................ 16 0 1 5.00 5 0 5 0
.......................................................TGTAAACATCCTCGTCTGGAAGCT............................................................................................ 24 1 1 5.00 5 3 2 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTTCT........................................................................................ 28 3 1 5.00 5 4 1 0
.......................................................TGTAAACATCCTCGACTGGACGCTT........................................................................................... 25 2 1 5.00 5 4 0 1
.......................................................TGTAAACATCCTCGACTGGAAGCTAGA......................................................................................... 27 3 3 4.67 14 14 0 0
.....................................................AATGTAAACATCCCCGACTGGAAGC............................................................................................. 25 2 2 4.50 9 6 3 0
.......................................................TGTAAACATCCACGACTGGAAGAT............................................................................................ 24 2 2 4.50 9 9 0 0
.......................................................TGTAAACATCCACGACTGGAAGGT............................................................................................ 24 2 2 4.50 9 9 0 0
........................................................GTAAACATCCTAGACTGGAAGCT............................................................................................ 23 1 2 4.50 9 9 0 0
.......................................................TGTAAACATCCACGACTGGAAG.............................................................................................. 22 1 2 4.50 9 9 0 0
.......................................................TGTAAACATCCTCGACTGGAAGCTTAAA........................................................................................ 28 3 3 4.33 13 13 0 0
.......................................................TGTAAACATCCTCGACTGGAACCTAT.......................................................................................... 26 2 1 4.00 4 4 0 0
.......................................................TGTAAACATCGTCGACTGGAAGC............................................................................................. 23 1 1 4.00 4 2 2 0
.......................................................TGTAAACATCCTCGAC.................................................................................................... 16 0 1 4.00 4 0 4 0
........................................................GTAAACATCCACGACTGGAAGCT............................................................................................ 23 1 2 4.00 8 8 0 0
................................................................................................CTTTCAGTCGGATGTTTGCAGTTA................................................... 24 2 1 4.00 4 4 0 0
.......................................................TGTAAACATCCTCGACAGGAAGCT............................................................................................ 24 1 1 4.00 4 4 0 0

Anti-sense strand reads

GTCCAGTCATTCTGTCTTACGACTTCTTCTGTATAGTTACAACTGTCACTCGTTGACATTTGTAGGAGCTGACCTTCGACACTTCGGTGTTTACCCGAAAGTCAGCCTACAAACGTCGACGGATGACAGAGGTTGAAGTTCCTCGTTAATAGAACAACCGACTTTGGTTAT
**************************************..(((((((.(((.((((((((((((..((((((((((((((....))).....))))))))))))))))))))))).))).)))))))....**************************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:50 PM