ID:

rno-mir-3085

Coordinate:

chr1:261524235-261524323 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-41.5 -41.3

Sense Strand Reads

CTCCAGTGCACCGTGGAGAGTCCCATACCCGGTCACCTCCATCACCAACAGTCCCTACTCTGGGAAGGTGCCATTCTGAAGGCCAGGAGTCTGAATATGAGTCACTCTGGCTGCTATGGCCCCCTCCCAGGGCTTGGGCATCACATCCCGACCAACAAGACTGGACCAAGCAAGAACTCCACCACAGCC
***********************************...............((((...((((((((.((.(((((......((((((((.((.......)).))...))))))...))))).)).))))))))...))))...............***********************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
.................................................................AGGTGCCATTCTGAAGGCCAGGAGT................................................................................................... 25 0 1 3.00 3 2 1
.........................................................................................................TCTGGCTGCTATGGCCCCCTCT.............................................................. 22 1 1 1.00 1 1 0
.........................................................................................................TCTGGCTGCTATGGCCCCCTCTAAGT.......................................................... 26 3 2 0.50 1 1 0
..........................................................................................................CTGGCTGCTATGGCCCCCTCTTAT........................................................... 24 3 3 0.33 1 1 0

Anti-sense strand reads

GAGGTCACGTGGCACCTCTCAGGGTATGGGCCAGTGGAGGTAGTGGTTGTCAGGGATGAGACCCTTCCACGGTAAGACTTCCGGTCCTCAGACTTATACTCAGTGAGACCGACGATACCGGGGGAGGGTCCCGAACCCGTAGTGTAGGGCTGGTTGTTCTGACCTGGTTCGTTCTTGAGGTGGTGTCGG
***********************************...............((((...((((((((.((.(((((......((((((((.((.......)).))...))))))...))))).)).))))))))...))))...............***********************************
Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:31 PM