ID:

rno-mir-3075

 Coordinate:

chr16:1822805-1822917 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-54.0 -53.8 -53.7 -53.6

Sense Strand Reads

CCCTCCGCGATACCAAAGGCCTTTGAGGAAGAAAACAGTGCTTCTCAGACCTGCTATTTACTCTGCGGTTTGTACTGTCTGGGAGCAGCCAAGGACAAGTTACCTCTTGTCTTCTGTCCTTGGCCTTCCTAGGTGTCCAAGCTCACGCAGGCTGGGAGCCAGAGCAGAGGACACTAGCAAGTCTGAGTGGGTCAGGCACCATTCTCCTCTGTG
***********************************....(((((((....(((((.((((.(((((((((((.((..((((((((..((((((((((....((.....))....)))))))))).)))))))).)).)))))...)))))).))))))).))....))))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
...........................................................................TGTCTGGGAGCAGCCAAGGACAAGT................................................................................................................. 25 0 1 14.00 14 14
...........................................................................TGTCTGGGAGCAGCCAAGGACAA................................................................................................................... 23 0 1 5.00 5 5
...........................................................................TGTCTGGGAGCAGCCAAGGACAAT.................................................................................................................. 24 1 1 2.00 2 2
...........................................................................TGACTGGGAGCAGCCAAGGACAAGT................................................................................................................. 25 1 1 1.00 1 1
...........................................................................TGTCTGGGAGCAGCCAAGGACAAGA................................................................................................................. 25 1 1 1.00 1 1
...........................................................................TGTCTGGGAGCAGCCAAGGACAAG.................................................................................................................. 24 0 1 1.00 1 1
...........................................................................TGTCTGGGAGCAGCCAAGGACATA.................................................................................................................. 24 2 1 1.00 1 1
...........................................................................TGTCTGGGCGCAGCCAAGGACAAAA................................................................................................................. 25 3 2 0.50 1 1

Anti-sense strand reads

GGGAGGCGCTATGGTTTCCGGAAACTCCTTCTTTTGTCACGAAGAGTCTGGACGATAAATGAGACGCCAAACATGACAGACCCTCGTCGGTTCCTGTTCAATGGAGAACAGAAGACAGGAACCGGAAGGATCCACAGGTTCGAGTGCGTCCGACCCTCGGTCTCGTCTCCTGTGATCGTTCAGACTCACCCAGTCCGTGGTAAGAGGAGACAC
***********************************....(((((((....(((((.((((.(((((((((((.((..((((((((..((((((((((....((.....))....)))))))))).)))))))).)).)))))...)))))).))))))).))....))))).....))*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:36 PM