ID:

rno-mir-3068

 Coordinate:

chr6:111468732-111468807 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-29.6 -29.6 -29.6

Sense Strand Reads

TAGACCTTGCTTGACTCTGCCTGTGGCCAAGCAAGGGGGACAGCGTATGCAAGAGTAATTGGAGTTCATGCAAGTTCTAACCAGTTTAACCAGTAGCTGGGTGAATTGCAGTACTCCAACATTCTGCTTCTATCCTCTTACAGTTCCCATGCTGCAGCGTGGTGGTATTTAACCTG
*******************************************.....(((.((((..(((((((...(((((.(((...((((((........))))))..))))))))..))))))).))))))).........**************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
..........................................................TTGGAGTTCATGCAAGTTCTAAC............................................................................................... 23 0 1 751.00 751 737 13 1
..........................................................TTGGAGTTCATGCAAGTTCTAACC.............................................................................................. 24 0 1 704.00 704 703 0 1
..........................................................TTGGAGTTCATGCAAGTTCTAACCA............................................................................................. 25 0 1 643.00 643 641 1 1
..........................................................TTGGAGTTCATGCAAGTTCTAA................................................................................................ 22 0 1 565.00 565 549 12 4
..........................................................TTGGAGTTCATGCAAGTTCTAACCAT............................................................................................ 26 1 1 239.00 239 238 1 0
..........................................................TTGGAGTTCATGCAAGTTCTAAA............................................................................................... 23 1 1 85.00 85 84 1 0
.........................................................ATTGGAGTTCATGCAAGTTCTAAC............................................................................................... 24 0 1 77.00 77 77 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACA.............................................................................................. 24 1 1 61.00 61 61 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACC.............................................................................................. 25 0 1 49.00 49 49 0 0
..........................................................TTGGAGTTCATGCAAGTTCTA................................................................................................. 21 0 1 49.00 49 45 4 0
...........................................................TGGAGTTCATGCAAGTTCTAACCAT............................................................................................ 25 1 1 48.00 48 48 0 0
...........................................................TGGAGTTCATGCAAGTTCTAACCA............................................................................................. 24 0 1 43.00 43 42 1 0
...........................................................TGGAGTTCATGCAAGTTCTAACC.............................................................................................. 23 0 1 35.00 35 35 0 0
...........................................................TGGAGTTCATGCAAGTTCTAAC............................................................................................... 22 0 1 34.00 34 32 2 0
..........................................................TTGGAGTTCATGCAAGTTCT.................................................................................................. 20 0 1 31.00 31 18 13 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCATT........................................................................................... 27 1 1 27.00 27 27 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACT.............................................................................................. 24 1 1 22.00 22 22 0 0
...........................................................TGGAGTTCATGCAAGTTCTAA................................................................................................ 21 0 1 22.00 22 22 0 0
..........................................................TTGGAGTTCATGCAAGTTCTCG................................................................................................ 22 2 1 19.00 19 0 0 19
.........................................................ATTGGAGTTCATGCAAGTTCTAACCA............................................................................................. 26 0 1 17.00 17 17 0 0
....................................................................................................GTGAATTGCAGTACTCCAACA....................................................... 21 0 1 17.00 17 16 1 0
.........................................................ATTGGAGTTCATGCAAGTTCTAA................................................................................................ 23 0 1 17.00 17 17 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCT............................................................................................. 25 1 1 16.00 16 16 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTA................................................................................................. 22 0 1 16.00 16 16 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAAC............................................................................................... 23 1 1 15.00 15 15 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCAA............................................................................................ 26 1 1 13.00 13 13 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAAT............................................................................................... 23 1 1 13.00 13 13 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAAAA.............................................................................................. 24 2 2 11.00 22 22 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAACC.............................................................................................. 24 1 1 11.00 11 11 0 0
....................................................................................................GTGAATTGCAGTACTCCAACAT...................................................... 22 0 1 10.00 10 10 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAT................................................................................................ 22 1 1 10.00 10 10 0 0
..........................................................TTGGAGTTCATGCACGTTCTAAC............................................................................................... 23 1 1 9.00 9 9 0 0
..........................................................TTGGAGTTCATGCAAGTTC................................................................................................... 19 0 1 9.00 9 7 2 0
..........................................................TTGGAGTTCATGCAAGTTCTAG................................................................................................ 22 1 1 9.00 9 9 0 0
...........................................................TGGAGTTCATGCAAGTTCTA................................................................................................. 20 0 1 9.00 9 8 0 1
..........................................................TTGGAGTTCATGCACGTTCTAACCA............................................................................................. 25 1 1 8.00 8 8 0 0
..........................................................TTGGAGTTCATGCACGTTCTAACC.............................................................................................. 24 1 1 7.00 7 7 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAA................................................................................................ 22 1 1 7.00 7 7 0 0
..........................................................TTGGAGTTCATGCAAGTTCTACC............................................................................................... 23 1 1 6.00 6 6 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCATTT.......................................................................................... 28 1 1 6.00 6 5 1 0
...........................................................TGGAGTTCATGCAAGTTCTAACA.............................................................................................. 23 1 1 6.00 6 6 0 0
...............................................................GTTCATGCAAGTTCTAACCT............................................................................................. 20 1 1 6.00 6 6 0 0
...........................................................TGGAGTTCATGCAAGTTCTAACCATT........................................................................................... 26 1 1 6.00 6 6 0 0
.........................................................ATTGGAGTTCATGCAAGTTCT.................................................................................................. 21 0 1 6.00 6 4 2 0
....................................................................................................GTGAATTGCAGTACTCCAA......................................................... 19 0 1 6.00 6 4 2 0
..........................................................TTGGAGTTCATGCAAGTTCTACCC.............................................................................................. 24 1 1 6.00 6 5 0 1
...................................................................................................GGTGAATTGCAGTACTCCAA......................................................... 20 0 1 6.00 6 2 4 0
.....................................................................................................TGAATTGCAGTACTCCAACAT...................................................... 21 0 1 6.00 6 6 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCAGT........................................................................................... 27 0 1 5.00 5 5 0 0
..........................................................TTGGAGTTCATGCAAGTTCTACCCA............................................................................................. 25 1 1 5.00 5 5 0 0
..........................................................TTGGAGTTCATGCACGTTCTAA................................................................................................ 22 1 1 5.00 5 5 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAC................................................................................................ 22 1 2 4.50 9 9 0 0
..........................................................TTGGAGTTCATGTAAGTTCTAACC.............................................................................................. 24 1 1 4.00 4 4 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCACT........................................................................................... 27 1 1 4.00 4 4 0 0
..........................................................TTGGAGTTCATGCAAGTT.................................................................................................... 18 0 1 4.00 4 4 0 0
..........................................................TTGGAGTTCATGCAAGTTCCG................................................................................................. 21 2 1 4.00 4 0 0 4
.........................................................CTTGGAGTTCATGCAAGTTCTAAC............................................................................................... 24 1 1 4.00 4 4 0 0
..........................................................CTGGAGTTCATGCAAGTTCTAA................................................................................................ 22 1 1 4.00 4 4 0 0
..........................................................TTGGAGTTCATGCTAGTTCTAACC.............................................................................................. 24 1 1 4.00 4 4 0 0
..........................................................TTGGAGTTCATGCAAGTTCTATCCA............................................................................................. 25 1 1 4.00 4 4 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAACCA............................................................................................. 25 1 1 4.00 4 4 0 0
..........................................................ATGGAGTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 4.00 4 4 0 0
..........................................................TTGGCGTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 4.00 4 4 0 0
..........................................................TTGGAGTTCAAGCAAGTTCTAA................................................................................................ 22 1 1 4.00 4 4 0 0
.......................................................AAATTGGAGTTCATGCAAGTTCTAAA............................................................................................... 26 2 1 3.00 3 3 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAGCCA............................................................................................. 25 1 1 3.00 3 3 0 0
..........................................................TTGGAGTTCATGCGAGTTCTAACC.............................................................................................. 24 1 1 3.00 3 3 0 0
....................................................................................................GTGAATTGCAGTACTCCAAC........................................................ 20 0 1 3.00 3 3 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACA.............................................................................................. 25 1 1 3.00 3 3 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAGCCAT............................................................................................ 26 2 1 3.00 3 3 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAT................................................................................................ 23 1 1 3.00 3 3 0 0
.....................................................ACCATTTGGAGTTCATGCAAGTTCTA................................................................................................. 26 3 1 3.00 3 3 0 0
..........................................................TTGGGGTTCATGCAAGTTCTAA................................................................................................ 22 1 1 3.00 3 3 0 0
..............................................................AGTTCATGCAAGTTCTAACCATTGG......................................................................................... 25 3 1 3.00 3 3 0 0
...........................................................TTGTGTTCATGCAAGTTCTAACCA............................................................................................. 24 2 1 3.00 3 3 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACT.............................................................................................. 25 1 1 3.00 3 2 1 0
..........................................................TTGGAGTTCATGCAAGTTCTAGC............................................................................................... 23 1 1 3.00 3 3 0 0
...........................................................TGGAGTTCATGCAAGTTCTAACT.............................................................................................. 23 1 1 3.00 3 3 0 0
........................................................AATTGGAGTTCATGCAAGTTCTA................................................................................................. 23 0 1 3.00 3 3 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACCAT............................................................................................ 27 1 1 3.00 3 3 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAACCAT............................................................................................ 26 2 1 3.00 3 3 0 0
............................................................GGAGTTCATGCAAGTTCTAACC.............................................................................................. 22 0 1 2.00 2 2 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAAA............................................................................................... 24 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCAGGTTCTAACC.............................................................................................. 24 1 1 2.00 2 2 0 0
...........................................................TGGAGTTCATGCAAGTTCTAAA............................................................................................... 22 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCACGTTCTAACCAT............................................................................................ 26 2 1 2.00 2 2 0 0
...................................................................................................GGTGAATTGCAGTACTCCAACAAT..................................................... 24 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCGAGTTCTAACCAT............................................................................................ 26 2 1 2.00 2 2 0 0
..........................................................TTGGAGGTCATGCAAGTTCTAAC............................................................................................... 23 1 1 2.00 2 2 0 0
...........................................................TGGAGTTCATGCAAGTTCTAAACA............................................................................................. 24 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACG.............................................................................................. 24 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAACA.............................................................................................. 24 2 1 2.00 2 2 0 0
........................................................AATTGGAGTTCATGCAAGTTCTAAC............................................................................................... 25 0 1 2.00 2 2 0 0
...................................................................................................GGTGAATTGCAGTACTCCAAC........................................................ 21 0 1 2.00 2 2 0 0
..........................................................TTGGAGTTCCTGCAAGTTCTAACCAT............................................................................................ 26 2 1 2.00 2 2 0 0
...................................................................................................GGTGAATTGCAGTACTCCAGTAAT..................................................... 24 3 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCTAGTTCTAACCA............................................................................................. 25 1 1 2.00 2 2 0 0
..........................................................TTGAAGTTCATGCACGTTCTAACC.............................................................................................. 24 2 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAAG............................................................................................... 23 1 1 2.00 2 2 0 0
..........................................................CTGGAGTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAGCC.............................................................................................. 24 1 1 2.00 2 2 0 0
....................................................................................................GTGCATTGCAGTACTCCAACAT...................................................... 22 1 1 2.00 2 2 0 0
...........................................................TGGAGTTCATGCAAGTTCTAAAT.............................................................................................. 23 2 1 2.00 2 2 0 0
..........................................................GTGGAGTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 2.00 2 2 0 0
..........................................................TTCGAGTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCTAGTTCTAAC............................................................................................... 23 1 1 2.00 2 2 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAAGC.............................................................................................. 24 1 1 2.00 2 2 0 0
..........................................................TTGAAGTTCATGCACGTTCTAAC............................................................................................... 23 2 1 2.00 2 2 0 0
..........................................................TTTGAGTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 2.00 2 1 1 0
...........................................................TGGAGTTCATGCAAGTTCTAACCAA............................................................................................ 25 1 1 2.00 2 2 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACCATT........................................................................................... 28 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCCTGCAAGTTCTAAC............................................................................................... 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTAATGCAAGTTCTATCC.............................................................................................. 24 2 1 1.00 1 1 0 0
..........................................................TTCGAGTTCATGCAAGTTCTAAC............................................................................................... 23 1 1 1.00 1 1 0 0
......................................................................................TAACCAGTAGCTGGGTGAATTGCAGTACTCCT.......................................................... 32 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATATAAGTTCTAAC............................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCTAAT............................................................................................... 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGATCTAAC............................................................................................... 23 1 1 1.00 1 1 0 0
..........................................................TTAGAGTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................CTGGAGTTCATGCTAGTTCTAACC.............................................................................................. 24 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCCTGCAAGTTCTAAC............................................................................................... 23 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAGGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCACGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
...........................................................TGGCGTTCATGCAAGTTCTAACCAT............................................................................................ 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGCTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACAAA............................................................................................ 26 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCATAC.......................................................................................... 28 3 1 1.00 1 1 0 0
..........................................................TTGGAGTTCACGCAAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
..........................................................TTTGAGTTCATGCCAGTTCTAAC............................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAACTTCTAACA.............................................................................................. 24 2 1 1.00 1 1 0 0
..........................................................TTGGGGTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTGGAATTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTAATGCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTCGAGTTCATGCAAGTTCTAACA.............................................................................................. 24 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCACA........................................................................................... 27 2 1 1.00 1 1 0 0
...................................................................................................GGTGAATTGCAGTACTCCAACA....................................................... 22 0 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATACAAGTTCTAAACA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTCCATGCAAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTTACC.............................................................................................. 25 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCAAGCCAGTTCTAAC............................................................................................... 24 2 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCTACCC.............................................................................................. 23 1 1 1.00 1 1 0 0
..........................................................ATGGAGTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTTATGCAAGTTCTAAC............................................................................................... 23 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTATAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
.........................................................AATGGAGTTCATGCAAGTTCTAACC.............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................GTGGAGTTCATGCAAGTTCTAAACA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTATC............................................................................................... 23 1 1 1.00 1 1 0 0
....................................................................................................GTGAATTGCAGTATTCCAACA....................................................... 21 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTTATGCAAGTTCTACCCA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATCCAAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCC.................................................................................................. 20 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGAAAGTTCTAACCA............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTATAACT.............................................................................................. 24 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTTTAAA............................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................TTCGAGTTCATGCCAGTTCTAAA............................................................................................... 23 3 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATTCACGTTCTAACC.............................................................................................. 24 2 1 1.00 1 1 0 0
.........................................................................................................TTGCAGTACTCCAACATTC.................................................... 19 0 1 1.00 1 0 1 0
..........................................................TTGGAGTTAATGCACGTTCTAACCA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAACCAA............................................................................................ 26 2 1 1.00 1 1 0 0
....................................................................................................GTGAATTGAAGTACTCCAACAT...................................................... 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAACTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCAAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGCTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
...........................................................TGGCGTTCCTGCAAGTTCTAACCA............................................................................................. 24 2 1 1.00 1 1 0 0
......................................................CCATTTGGAGTTCATGCAAGTTCTAA................................................................................................ 26 3 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAATT.............................................................................................. 24 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTTTAAC............................................................................................... 24 1 1 1.00 1 1 0 0
..........................................................TTGAAGTTCATGCAAGTTCTAACCAT............................................................................................ 26 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAATTCTCACC.............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGCTCTCACC.............................................................................................. 24 2 1 1.00 1 1 0 0
...................................................................................................AGTGAATTGCAGTACTCCAACA....................................................... 22 1 1 1.00 1 1 0 0
.........................................................ATTCGAGTTCATGCCAGTTCTAACC.............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCGAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................CTGAAGTTCATGCAAGTTCTAACCA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGGTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTAGAGTTCATGCAAGTTCTAAC............................................................................................... 23 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCTAAAA.............................................................................................. 23 2 2 1.00 2 2 0 0
..........................................................TTGGAGCTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTATCA.............................................................................................. 24 2 1 1.00 1 1 0 0
........................................................TATTGGAGTTCATGCAAGTTCTGAC............................................................................................... 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCTAGTTCTA................................................................................................. 21 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATACAAGTTCTAAACA............................................................................................. 24 2 1 1.00 1 1 0 0
.........................................................ATTTGAGTTCGTGCAAGTTCTAA................................................................................................ 23 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCTAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAGGTTCTAAC............................................................................................... 23 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGAAAGTTCTAACCA............................................................................................. 26 1 1 1.00 1 1 0 0
..........................................................TTCGAGTTCATGCAAGTTCTAACCAT............................................................................................ 26 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTGACC.............................................................................................. 25 1 1 1.00 1 1 0 0
........................................................AATTGGAGTTCATGCAAGTTCTAACC.............................................................................................. 26 0 1 1.00 1 1 0 0
..........................................................TTGGAGTTCAAGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCAAT........................................................................................... 27 1 1 1.00 1 1 0 0
...........................................................TGGAGTTTATGCAAGTTCTAACCAT............................................................................................ 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTACATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCGAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTAATGCAAGTTCTAACA.............................................................................................. 24 2 1 1.00 1 1 0 0
.........................................................TTTGGAGTTCATGCAAGTTC................................................................................................... 20 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCTAATCAT............................................................................................ 25 2 1 1.00 1 1 0 0
..........................................................TTGCAGTTAATGCACGTTCTAACCA............................................................................................. 25 3 1 1.00 1 1 0 0
..........................................................TTGAAGTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
........................................................AATTGGAGTTTATGCAAGTTCTA................................................................................................. 23 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCACGTTCTAACCA............................................................................................. 24 1 1 1.00 1 1 0 0
.....................................................CGGAATTGGAGTTCATGCAAGTTCT.................................................................................................. 25 2 1 1.00 1 0 1 0
.......................................................AAATTGGAGTTCATGCAAGTTCTAACCAT............................................................................................ 29 2 1 1.00 1 1 0 0
............................................................GGAGTTCCTGCAAGTTCTAACCAT............................................................................................ 24 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCACGCAAGTTCTAACC.............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTATAAC............................................................................................... 23 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTATCCAT............................................................................................ 26 2 1 1.00 1 1 0 0
..........................................................GTGGAGTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
...........................................................TGGCGTTCATGCAAGTTCTAACCATT........................................................................................... 26 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCAAAC............................................................................................... 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAATCA............................................................................................. 25 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACCC............................................................................................. 26 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGGAAGTTCTAACCA............................................................................................. 24 1 1 1.00 1 1 0 0
...........................................................AGGAGTTCCTGCAAGTTCTAACCA............................................................................................. 24 2 1 1.00 1 1 0 0
...........................................................AGGAGTTCATGCAAGTTCTAACCAT............................................................................................ 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTACATGCAAGTTCTAACCATT........................................................................................... 27 2 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCTAACCAAT........................................................................................... 26 1 1 1.00 1 1 0 0
..........................................................TTGGACTTCATGCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
.......................................................AAATTGGAGTTCATGCAAGTTCTAACC.............................................................................................. 27 1 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAGGTTCTAACC.............................................................................................. 23 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCCTGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
...........................................................TTGAGTTCATGCAAGTTCTAACCA............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGCGTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAAAAA............................................................................................. 25 2 2 1.00 2 2 0 0
..........................................................TTGGAGTCCATGCAAGTTCTAACCAT............................................................................................ 26 2 1 1.00 1 1 0 0
....................................................................................................GGGAATTGCAGTACTCCAACA....................................................... 21 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCGAGTTCTT................................................................................................. 22 2 1 1.00 1 1 0 0
....................................................................................................GTGCATTGCAGTACTCCAA......................................................... 19 1 1 1.00 1 0 1 0
............................................................GGAGTTCATGCTAGTTCTAACCAT............................................................................................ 24 2 1 1.00 1 1 0 0
......................................................AAAATTGGAGTTCATGCAAGTTCTAAC............................................................................................... 27 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTATAAA............................................................................................... 23 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCACGTTCTAACA.............................................................................................. 24 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAATCATT........................................................................................... 27 2 1 1.00 1 1 0 0
............................................................GGAGTTCATGCAAGTTCTAACAAT............................................................................................ 24 2 1 1.00 1 1 0 0
..........................................................CTGGAGTTCATGCAAGTTCTAATC.............................................................................................. 24 2 1 1.00 1 1 0 0
............................................................GGAGTTCATGCAAGTTCTAACCA............................................................................................. 23 0 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCTT............................................................................................ 26 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGCTCTATCCA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCG.................................................................................................. 20 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATCCAAGTTCTAACCA............................................................................................. 25 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCACGCAAGTTCTAT................................................................................................ 23 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTCACC.............................................................................................. 25 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATACAAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCATA........................................................................................... 27 2 1 1.00 1 1 0 0
........................................................CATTGGAGTTCATGCAAGTTCTAAC............................................................................................... 25 1 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTCAC............................................................................................... 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTCCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
............................................................GGAGTTCATGCAAGTTCTAACCATT........................................................................................... 25 1 1 1.00 1 1 0 0
...........................................................TGGCGTTCATGGAAGTTCTAACC.............................................................................................. 23 2 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCT.................................................................................................. 19 0 1 1.00 1 0 1 0
..........................................................TTGGCGTTCATGCAAGGTCTAACCA............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGATCATGCAAGTTCTAA................................................................................................ 22 1 1 1.00 1 1 0 0
.......................................................AAATTGGAGTTCATGCAAGTT.................................................................................................... 21 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTCCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
...................................................................................................GGTGAATTGCAGTACTCCAACC....................................................... 22 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTCAC............................................................................................... 23 1 1 1.00 1 1 0 0
...................................................................................................GGTGAATTGCAGTACTCCAACAA...................................................... 23 1 1 1.00 1 1 0 0
.....................................................................................................TGAATTGCAGTACTCCAACATT..................................................... 22 0 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAAAC.............................................................................................. 24 1 1 1.00 1 1 0 0
............................................................GGAGTTCATGCAAGTTCTAACCAT............................................................................................ 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCCAGTTCTAAA............................................................................................... 23 2 1 1.00 1 1 0 0
...........................................................TCGAGTTCATGCAAGTTCTAACCAT............................................................................................ 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTCCC............................................................................................... 23 2 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTAACCT............................................................................................. 26 1 1 1.00 1 1 0 0
..........................................................TTGGATTTCATGCAAGTTCTAACC.............................................................................................. 24 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCTAGTTCTAACCT............................................................................................. 25 2 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATACACGTTCTAAC............................................................................................... 23 2 1 1.00 1 1 0 0
...........................................................TGGAGTTCATGCAAGTTCTAACCAGTTTA........................................................................................ 29 0 1 1.00 1 1 0 0
.........................................................ATTGGAGTTCATGCAAGTTCTGA................................................................................................ 23 1 1 1.00 1 1 0 0
....................................................................................................GTGAATTGCAGTACTCCAACT....................................................... 21 1 1 1.00 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTAACCATTTC......................................................................................... 29 2 1 1.00 1 1 0 0
.....................................................TCTAATTGGAGTTCATGCAAGT..................................................................................................... 22 2 2 0.50 1 1 0 0
..........................................................TTGGAGTTCATGCACGTTCTAAA............................................................................................... 23 2 2 0.50 1 1 0 0
..........................................................TTGGAGTTCATGCAAGATCTAA................................................................................................ 22 1 2 0.50 1 1 0 0
...........................................................TGGAGTTCATGCAAGGTCTAAT............................................................................................... 22 2 2 0.50 1 1 0 0
..........................................................TTGGAGTACATGCAAGTTCTAA................................................................................................ 22 1 2 0.50 1 1 0 0
..........................................................TTGAAGTTCATGCAAGTTCTAA................................................................................................ 22 1 2 0.50 1 1 0 0
...........................................................TGGAGTTCCTGCAAGTTCTAAACAT............................................................................................ 25 3 2 0.50 1 1 0 0
..........................................................TTGGAGTTCATGCAGGTTCTAAA............................................................................................... 23 2 2 0.50 1 1 0 0
...........................................................TGGAGTTCATGCATGTTCTAA................................................................................................ 21 1 2 0.50 1 1 0 0
..........................................................TTGGAGTGTATGCAAGTTCTAAC............................................................................................... 23 2 2 0.50 1 1 0 0
..........................................................TTGGAGTTCATTCAAGTTC................................................................................................... 19 1 2 0.50 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTACCA.............................................................................................. 24 2 2 0.50 1 1 0 0
..........................................................TTGGAGTTCATGCAAGCTCTACC............................................................................................... 23 2 2 0.50 1 1 0 0
......................................................AAAATTGGAGTTCATGCAAGTTCT.................................................................................................. 24 2 2 0.50 1 0 1 0
..........................................................TTGGAGTTCATGCAAGTTCTATA............................................................................................... 23 2 2 0.50 1 1 0 0
........................................................................................................ATTGCAGTACTCCAA......................................................... 15 0 3 0.33 1 0 1 0
..........................................................TTGGAGTTCATGCAAGTTCTCTCCT............................................................................................. 25 3 3 0.33 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTTCTCC................................................................................................ 22 2 4 0.25 1 1 0 0
..........................................................TTGGAATTCATGCAAGTTCTAC................................................................................................ 22 2 4 0.25 1 1 0 0
.........................................................CTTGGAGCTCATGCAAGTTCTCAC............................................................................................... 24 3 6 0.17 1 1 0 0
..........................................................TTGGAGTTCATGCACGTTCTCG................................................................................................ 22 3 7 0.14 1 0 0 1
..................................................................................................AAGTGAATTGCAGTACTCCAAAA....................................................... 23 3 7 0.14 1 1 0 0
......................................................AAAATTGGAGTTCATGCAAGTTA................................................................................................... 23 3 9 0.11 1 1 0 0
..........................................................TTGGAGTTCATTCAAGTTCTCAA............................................................................................... 23 3 9 0.11 1 1 0 0
..........................................................TTGGAGTTCATGCAAGTCCTCG................................................................................................ 22 3 10 0.10 1 0 0 1
...............................................................GATCATGCAAGTTCTAACCT............................................................................................. 20 2 15 0.07 1 1 0 0
................................................................TTCATGCAAGTTCTAAA............................................................................................... 17 1 20 0.05 1 1 0 0

Anti-sense strand reads

ATCTGGAACGAACTGAGACGGACACCGGTTCGTTCCCCCTGTCGCATACGTTCTCATTAACCTCAAGTACGTTCAAGATTGGTCAAATTGGTCATCGACCCACTTAACGTCATGAGGTTGTAAGACGAAGATAGGAGAATGTCAAGGGTACGACGTCGCACCACCATAAATTGGAC
****************************************.....(((.((((..(((((((...(((((.(((...((((((........))))))..))))))))..))))))).))))))).........******************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:46 PM