ID:

rno-mir-3064

 Coordinate:

chr10:94982051-94982117 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-27.5 -27.2 -27.2

Sense Strand Reads

TTTTCAGCCCGTACCTTCTTGGGAATACAATTGTCTAACTTTTTATTTTTGGTCTGGCTGTTGTGGTGTGCAAAACTCCGTACATTGCTATTTTGCCACACTGCAACACCTTACAGATGTGGAAGATGTGAAATTTGTCATCAATTATGACTACCCTAACTCCTCAG
*************************************..(((((((.((((....((.(((((((((((((((((...((.....))...))))).))))))))))))))...)))).))))))).....************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
............................................................................................TTGCCACACTGCAACACCTTACA.................................................... 23 0 1 4.00 4 4 0 0
...........................................................................................TTTGCCACACTGCAACACCTTAAGA................................................... 25 3 1 2.00 2 2 0 0
.......................................................................................................................TGGAAGATGTGAAATTTGTCATCAATT..................... 27 0 1 2.00 2 2 0 0
.............................................................................................TGCCACACTGCAACACCTTACAGT.................................................. 24 1 1 2.00 2 2 0 0
........................................................................................TATTTTGCCACACTGCAACACCT........................................................ 23 0 1 2.00 2 2 0 0
....................................................TCTGGCTGTTGTGGTGTGCAAAA............................................................................................ 23 0 1 2.00 2 2 0 0
.....................................................................................................................TGTGGAAGATGTGAAATTTGTCATCAATTT.................... 30 1 1 2.00 2 0 2 0
...........................................................................................TTTGCCACACTGCAACACCTTA...................................................... 22 0 1 2.00 2 2 0 0
...........................................................................................TTTGCCACACTGCAACACCTGA...................................................... 22 1 1 1.00 1 0 1 0
....................................................TCTAGCTGTTGTGGTGTGCAAAA............................................................................................ 23 1 1 1.00 1 1 0 0
...................TGGGAATACAATTGTCTAACTTTTTATTTT...................................................................................................................... 30 0 1 1.00 1 0 1 0
.......................................................................................................................TGGAAGATGTGAACTTTGTCATCAATT..................... 27 1 1 1.00 1 1 0 0
....................................................TCTGGCTGTTGTGGTGTGCAAA............................................................................................. 22 0 1 1.00 1 1 0 0
......................................................TGGCTGTTGTGGTGTGCAA.............................................................................................. 19 0 1 1.00 1 1 0 0
..................................................GGTCTGGCTGTTGTGGTGTGCAAT............................................................................................. 24 1 1 1.00 1 1 0 0
...........................................................................................TTTGCCACACTGCAACACCTTAA..................................................... 23 1 1 1.00 1 1 0 0
.........................................................CTGTTGTGGTGTGCAAAACT.......................................................................................... 20 0 1 1.00 1 1 0 0
........................................................................................TATTTTTCCACACTTCAACACCT........................................................ 23 2 1 1.00 1 1 0 0
...........................................................................................TTTGCCACACTGCAACACCTTAT..................................................... 23 1 1 1.00 1 1 0 0
...........................................................................................TTTGCCACACTGCAACACCTTTAA.................................................... 24 2 1 1.00 1 1 0 0
........................................................................................TATTTTGCCACACTTCAACACCT........................................................ 23 1 1 1.00 1 1 0 0
...........................................................................................TTTGCCACACTGCAACACCTT....................................................... 21 0 1 1.00 1 1 0 0
................................................TTGGTCTGGCTGTTG........................................................................................................ 15 0 11 0.09 1 0 0 1

Anti-sense strand reads

AAAAGTCGGGCATGGAAGAACCCTTATGTTAACAGATTGAAAAATAAAAACCAGACCGACAACACCACACGTTTTGAGGCATGTAACGATAAAACGGTGTGACGTTGTGGAATGTCTACACCTTCTACACTTTAAACAGTAGTTAATACTGATGGGATTGAGGAGTC
*************************************..(((((((.((((....((.(((((((((((((((((...((.....))...))))).))))))))))))))...)))).))))))).....************************************* 		Read size # Mismatch Hit Count Total Norm Total

Generated: 04/30/2015 at 05:33 PM