ID:

rno-mir-29b-3

 Coordinate:

chr13:113782057-113782137 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-35.3 -35.3 -35.0
mature
  1. chr1:38238427-38238450 +
  2. chr13:113782108-113782131 +
star
  1. chr1:38238386-38238409 +
  2. chr13:113782067-113782090 +

Sense Strand Reads

GACTGGTTCTTCTGACTGCACTTCTCTGCTTTCTTCAGTGAGATCCTCTTCTTCTGGAAGCTGGTTTCACATGGTGGCTTAGATTTTTCCATCTTTGTATCTAGCACCATTTGAAATCAGTGTTTTAGGAGTAAGAATTGCAGCACAGCAGAGGGTAGACTGCAGAGGAACAGCTGTACCC
*********************************************.(((((((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))))))).))))....***************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes		 GSM1528817
Adult_testes		 GSM1528818
Adult_testes_Mili_IP
.....................................................................................................TAGCACCATTTGAAATCAGTGTTT........................................................ 24 0 2 777.00 1554 1318 232 4
.....................................................................................................TAGCACCATTTGAAATCAGTGTT......................................................... 23 0 3 756.00 2268 2134 120 14
.....................................................................................................TAGCACCATTTGAAATCAGTGTTA........................................................ 24 1 3 394.00 1182 1115 63 4
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAA....................................................... 25 2 3 67.33 202 189 13 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTT....................................................... 25 0 2 61.00 122 105 17 0
.....................................................................................................TAGCACCATTTGAAATCAGTGT.......................................................... 22 0 3 57.00 171 146 25 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAA...................................................... 26 2 2 42.00 84 78 6 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAT....................................................... 25 1 3 26.67 80 78 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAA...................................................... 26 1 2 25.00 50 50 0 0
............................................................CTGGTTTCACATGGTGGCTTAGAT................................................................................................. 24 0 2 24.50 49 49 0 0
.....................................................................................................TAGCACCATTTGAAATCAGT............................................................ 20 0 3 23.67 71 62 9 0
......................................................................................................AGCACCATTTGAAATCAGTGTTT........................................................ 23 0 2 23.50 47 44 3 0
......................................................................................................AGCACCATTTGAAATCAGTGTT......................................................... 22 0 3 22.33 67 58 9 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTA....................................................... 25 1 2 21.50 43 43 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTG........................................................... 21 0 3 17.33 52 41 11 0
....................................................................................................CTAGCACCATTTGAAATCAGTGT.......................................................... 23 0 3 16.33 49 46 3 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAT...................................................... 26 2 3 16.00 48 48 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTA........................................................ 23 1 3 15.00 45 41 4 0
.............................................................TGGTTTCACATGGTGGCTTAGAT................................................................................................. 23 0 2 14.50 29 29 0 0
............................................................CTGGTTTCACATGGTGGCTTAGA.................................................................................................. 23 0 2 12.50 25 24 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTT...................................................... 26 1 3 12.00 36 34 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAA........................................................ 24 2 3 12.00 36 35 0 1
....................................................................................................ATAGCACCATTTGAAATCAGTGTTT........................................................ 25 1 2 10.50 21 19 1 1
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAGA...................................................... 26 2 2 10.00 20 20 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTGTT......................................................... 24 1 3 9.00 27 24 3 0
.....................................................................................................TAGCACCATTTGACATCAGTGTT......................................................... 23 1 3 8.33 25 25 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTT........................................................ 24 1 2 7.00 14 14 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTG........................................................... 22 0 3 6.67 20 17 3 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTT......................................................... 23 1 3 6.33 19 18 0 1
.....................................................................................................TAGCACCATTTGAACTCAGTGTTT........................................................ 24 1 2 6.00 12 12 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTG........................................................ 24 1 3 6.00 18 16 2 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTA........................................................ 24 2 3 6.00 18 18 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAT........................................................ 24 1 2 5.50 11 10 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTA......................................................... 23 1 3 4.67 14 14 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGA.................................................................................................. 24 0 2 4.50 9 9 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTGA....................................................... 25 2 3 4.33 13 11 2 0
....................................................................................................CTAGCACCATTTGAAATCAGTGA.......................................................... 23 1 3 4.33 13 11 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCT......................................................... 23 1 3 4.33 13 12 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAAA..................................................... 27 2 2 3.50 7 7 0 0
....................................................................................................CTAGCACCATTTGAAATCAGT............................................................ 21 0 3 3.33 10 5 5 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTTA........................................................ 24 2 3 3.33 10 9 0 1
...........................................................GCTGGTTTCACATGGTGGCTTAG................................................................................................... 23 0 2 3.00 6 6 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGA.......................................................... 22 1 3 2.67 8 8 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTGTTA........................................................ 25 2 3 2.67 8 7 1 0
...........................................................GCTGGTTTCACATGGTGGCTTA.................................................................................................... 22 0 2 2.50 5 5 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAAT..................................................... 27 3 2 2.50 5 5 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGATT........................................................ 24 1 2 2.50 5 5 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCTT........................................................ 24 1 2 2.50 5 4 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAAA..................................................... 27 3 3 2.33 7 7 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAG....................................................... 25 2 3 2.33 7 7 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGTAA........................................................ 25 2 3 2.00 6 6 0 0
............................................................CTGGTTTCACATGGTGGCTTAG................................................................................................... 22 0 2 2.00 4 4 0 0
....................................................................................................CTAGCACCATTTGAAATCAGTGTT......................................................... 24 0 3 2.00 6 6 0 0
.....................................................................................................TAGCACCATTTGAAGTCAGTGTTT........................................................ 24 1 2 2.00 4 2 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTGAA...................................................... 26 2 2 2.00 4 4 0 0
..................................................................................................AAATAGCACCATTTGAAATCAGTGTT......................................................... 26 2 2 2.00 4 4 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCTA........................................................ 24 2 3 2.00 6 6 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTTT....................................................... 24 0 2 2.00 4 4 0 0
...................................................................................................AATAGCACCATTTGAAATCAGTGTTT........................................................ 26 2 2 2.00 4 4 0 0
......................................................................................................AGCACCATTTGAAATCAGTGT.......................................................... 21 0 3 2.00 6 4 2 0
.......................................................................................................GCACCATTTGAAATCAGTGTT......................................................... 21 0 3 2.00 6 6 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGAT......................................................... 23 1 3 2.00 6 6 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAG...................................................... 26 3 3 1.67 5 5 0 0
......................................................................................................AGCACCATTTGAAATCAGT............................................................ 19 0 3 1.67 5 4 1 0
.......................................................................................................GCACCATTTGAAATCAGTGTTT........................................................ 22 0 2 1.50 3 3 0 0
.....................................................................................................TAGAACCATTTGAAATCAGTGTTT........................................................ 24 1 2 1.50 3 3 0 0
.....................................................................................................TATCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 1.50 3 1 2 0
.............................................................TGGTTTCACATGGTGGCTTAGA.................................................................................................. 22 0 2 1.50 3 3 0 0
.....................................................................................................TAGCACCCTTTGAAATCAGTGTTT........................................................ 24 1 2 1.50 3 1 2 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTCT........................................................ 24 1 2 1.50 3 3 0 0
.....................................................................................................TAGCACCATTTGAAACCAGTGTTT........................................................ 24 1 2 1.50 3 2 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGGT......................................................... 23 1 3 1.33 4 4 0 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTTA........................................................ 24 2 3 1.33 4 4 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTAAC...................................................... 26 3 3 1.33 4 4 0 0
.....................................................................................................TATCACCATTTGAAATCAGTGTTA........................................................ 24 2 3 1.33 4 2 2 0
.....................................................................................................TAGAACCATTTGAAATCAGTGTT......................................................... 23 1 3 1.33 4 3 1 0
....................................................................................................TTAGCACCATTTGAAATCAGTGT.......................................................... 23 1 3 1.00 3 3 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTGA...................................................... 26 1 2 1.00 2 0 2 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTTTT....................................................... 25 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTTT....................................................... 25 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTTT..................................................... 27 2 3 1.00 3 3 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTTTA...................................................... 25 0 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGATATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAATTCAGTGTT......................................................... 23 1 3 1.00 3 3 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTGTTTA....................................................... 26 2 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTGT....................................................... 25 1 3 1.00 3 3 0 0
.....................................................................................................TAGCAACATTTGAAATCAGTGTTT........................................................ 24 1 2 1.00 2 1 1 0
...........................................................GCTGGTTTCACATGGTGGCTTAGT.................................................................................................. 24 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAAT..................................................... 27 2 2 1.00 2 2 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTTAA...................................................... 25 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTGTTT........................................................ 24 1 2 1.00 2 1 1 0
.....................................................................................................TAGCACCATTTGAAATCCGTGTT......................................................... 23 1 3 1.00 3 3 0 0
.....................................................................................................CAGCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
....................................................................................................CTAGCACCATTTGAAATCCGTGT.......................................................... 23 1 3 1.00 3 3 0 0
.....................................................................................................TAGCACCATTTGAAATCAGCGTT......................................................... 23 1 3 1.00 3 3 0 0
.....................................................................................................TAGCACCATTCGAAATCAGTGTT......................................................... 23 1 3 1.00 3 2 1 0
.....................................................................................................TAGCACCATTTGAATTCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
............................................................CTGGTTTCACATGGTGGCTTAGT.................................................................................................. 23 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTTA....................................................... 25 2 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAAAA.................................................... 28 3 2 1.00 2 2 0 0
.....................................................................................................TGGCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
.....................................................................................................AAGCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
.....................................................................................................TAGAACCATTTGAAATCAGTGTTAAA...................................................... 26 3 2 1.00 2 2 0 0
............................................................CTGGTTTCACATGGTGGCTTAGAAGTTTT............................................................................................ 29 3 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTTTTT........................................................ 24 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGTT......................................................... 23 1 3 1.00 3 3 0 0
.....................................................................................................TAGCACCATTAGAAATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTTTT....................................................... 25 1 2 1.00 2 2 0 0
........................................................................................................CACCATTTGAAATCAGTGTTT........................................................ 21 0 2 1.00 2 2 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAT................................................................................................... 23 1 2 1.00 2 2 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTAA....................................................... 24 2 4 1.00 4 4 0 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTTAA....................................................... 25 3 3 1.00 3 3 0 0
.....................................................................................................TAGCACAATTTGAAATCAGTGTTT........................................................ 24 1 2 1.00 2 2 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTGAA...................................................... 25 2 2 1.00 2 2 0 0
........................................................................................................CACCATTTGAAATCAGTGTT......................................................... 20 0 3 1.00 3 0 3 0
.....................................................................................................TAGGACCATTTGAACTCAGTGTTA........................................................ 24 3 4 0.75 3 3 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTAAA....................................................... 25 3 4 0.75 3 3 0 0
............................................................................................................ATTTGAAATCAGTGTTT........................................................ 17 0 4 0.75 3 0 3 0
.....................................................................................................TAGCACCATTTGAAATCAGAGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTT......................................................... 23 1 3 0.67 2 1 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTG......................................................... 23 1 3 0.67 2 2 0 0
....................................................................................................ATAGCACCATTTGAAATCAGT............................................................ 21 1 3 0.67 2 1 1 0
.....................................................................................................TAGCACCATTTGATATCAGTGTTA........................................................ 24 2 3 0.67 2 2 0 0
.....................................................................................................TAGCACCTTTTGAAATCAGTGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTT......................................................... 23 1 3 0.67 2 2 0 0
.......................................................................................................GCACCATTTGAAATCAGTGT.......................................................... 20 0 3 0.67 2 1 1 0
.....................................................................................................TGGCACCATTTGAAATCAGTGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TGGCACCATTTGAAATCAGTGTTA........................................................ 24 2 3 0.67 2 1 1 0
.....................................................................................................TAGCACCATCTGAAATCAGTGTT......................................................... 23 1 3 0.67 2 2 0 0
......................................................................................................AGCACCATTTGAACTCAGTGTT......................................................... 22 1 3 0.67 2 2 0 0
......................................................................................................AGCACCATTTGAAATCAGTGA.......................................................... 21 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACAATTTGAAATCAGTGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAGCCCCATTTGAAATCAGTGTTA........................................................ 24 2 3 0.67 2 1 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTTT.......................................................... 22 1 3 0.67 2 2 0 0
.....................................................................................................TAGAACCATTTGAAATCAGTGTTA........................................................ 24 2 3 0.67 2 2 0 0
.....................................................................................................TATCACCATTTGAAATCAGTGTT......................................................... 23 1 3 0.67 2 0 2 0
...................................................................................................TCTAGCACCATTTGAAATCAGT............................................................ 22 0 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTTTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAACACCATTTGAAATCAGTGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTATT..................................................... 27 3 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGATATCAGTGTT......................................................... 23 1 3 0.67 2 1 0 1
.....................................................................................................TAGCACCATTTGACATCAGTGTTAA....................................................... 25 3 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTGT.......................................................... 22 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGGAATCAGTGTTA........................................................ 24 2 3 0.67 2 2 0 0
.....................................................................................................TAGAACCATTTGACATCAGTGTT......................................................... 23 2 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTGTTA........................................................ 24 2 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAGATCAGTGTTA........................................................ 24 2 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTGA........................................................ 24 2 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAATCATTGTT......................................................... 23 1 3 0.67 2 2 0 0
.....................................................................................................TAGCACCATTTGAAAT................................................................ 16 0 8 0.63 5 0 5 0
.....................................................................................................TAGCACCATTTGAAATCAGTGATA........................................................ 24 2 5 0.60 3 3 0 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTTA........................................................ 24 2 5 0.60 3 3 0 0
.....................................................................................................TAGCACCATTTGAAATCAGCGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATCTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 0 1 0
...........................................................GCTGGTTTCACATGGTGGCTTCGA.................................................................................................. 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGAGTTTT....................................................... 25 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTGAAT.................................................... 28 3 2 0.50 1 1 0 0
............................................................CTGGTTTCACATGGTGGCTTAAAT................................................................................................. 24 1 2 0.50 1 0 0 1
.....................................................................................................TAGCACCATTTGAAATCAGTGTATAA...................................................... 26 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTGT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCCTTTGAAATCCGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
............................................................CTGGGTTCACATGGTGGCTTAGA.................................................................................................. 23 1 2 0.50 1 1 0 0
......................................................................................................AGCACCATTTGAATTCAGTGTTT........................................................ 23 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGATAAA...................................................... 26 3 2 0.50 1 1 0 0
.....................................................................................................TAGCACGATTTGAAATCAGTGTTTAA...................................................... 26 2 2 0.50 1 1 0 0
...........................................................GCTGGTTTCACATGGTGGCTTAGAT................................................................................................. 25 0 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGAGTTT........................................................ 24 1 2 0.50 1 1 0 0
...........................................................GCTGGTTTCACATGGTGGCTTCG................................................................................................... 23 1 2 0.50 1 1 0 0
...........................................................GCTGGTCTCACATGGTGGCTTAGA.................................................................................................. 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTGAAA...................................................... 26 3 2 0.50 1 1 0 0
...........................................................GCTGGTTTCCCATGGTGGCTTAGAT................................................................................................. 25 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTGA..................................................... 27 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGATATCAGTGTTTAG...................................................... 26 3 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTCGAAATCAGTGTTTAA...................................................... 26 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTA...................................................... 26 0 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTTGAA.................................................... 28 3 2 0.50 1 0 1 0
.....................................................................................................TAGAACCATTTGAACTCAGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTGTTAGA...................................................... 27 3 2 0.50 1 1 0 0
.....................................................................................................CAGCACCATTTGAAATCAGTGTTTA....................................................... 25 2 2 0.50 1 1 0 0
......................................................................................................AGCACCATTTGCAATCAGTGTTT........................................................ 23 1 2 0.50 1 1 0 0
.....................................................................................................TACCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTCCAGA................................................... 29 3 2 0.50 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGGTTA....................................................... 25 2 2 0.50 1 1 0 0
.....................................................................................................AAGCACCATTTGAAATCAGTGTGT........................................................ 24 2 2 0.50 1 1 0 0
...........................................................................................................CATTTGAAATCAGTGTTTT....................................................... 19 0 2 0.50 1 0 1 0
...........................................................GCTGGTTTCACATGGTGGCTTT.................................................................................................... 22 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGATATCAGTGTTTA....................................................... 25 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCGTTTGAAATCAGTGTTTT....................................................... 25 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTCGAAATCAGTGCTT........................................................ 24 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTAGA...................................................... 26 3 2 0.50 1 1 0 0
............................................................CTGGTTTCACATGGTGGCTTAAA.................................................................................................. 23 1 2 0.50 1 1 0 0
.....................................................................................................TAGCAGCATTTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGCGTTTT....................................................... 25 1 2 0.50 1 1 0 0
........................................................................................................CACCATTTGAAATCAGTGTTTA....................................................... 22 1 2 0.50 1 1 0 0
.....................................................................................................GAGCACCATTTGAAATCAGTGTGTT....................................................... 25 2 2 0.50 1 1 0 0
.....................................................................................................AAGCACCATTTGAAATCAGTGTCT........................................................ 24 2 2 0.50 1 1 0 0
............................................................CTGGTTTCACCTGGTGGCTTAGA.................................................................................................. 23 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCAATTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
............................................................CTGGTTTCACATGGTGGCTTAGATA................................................................................................ 25 1 2 0.50 1 1 0 0
......................................................................................................AGCCCCATTTGAAATCCGTGTTT........................................................ 23 2 2 0.50 1 1 0 0
.............................................................TGGTTTCACATGGTGGCTTAGATT................................................................................................ 24 0 2 0.50 1 1 0 0
.....................................................................................................TAACACCATTTGACATCAGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
..........................................................................................................CCATTTGAAATCAGTGTTT........................................................ 19 0 2 0.50 1 0 1 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTTTA....................................................... 25 2 2 0.50 1 1 0 0
.....................................................................................................TCGCACCATTTGAAATCAGTGTTTAA...................................................... 26 2 2 0.50 1 1 0 0
.....................................................................................................GAGCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTAG...................................................... 26 2 2 0.50 1 1 0 0
.....................................................................................................TAGCAACATTTGAACTCAGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
......................................................................................................AGCACCATTTGAACTCAGTGTTT........................................................ 23 1 2 0.50 1 1 0 0
...........................................................................................................CATTTGAAATCAGTGTT......................................................... 17 0 6 0.50 3 0 3 0
.....................................................................................................TAGCACCCTTTGACATCAGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
.........................................................................................................ACCATTTGAAATCAGTGTTT........................................................ 20 0 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TAACACCATTTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGGGTTT........................................................ 24 1 2 0.50 1 1 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTAT........................................................ 23 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTGCTT........................................................ 24 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCACTGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TACCACCATTTGACATCAGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
............................................................CTGGTTTCACATGGTGGCTTAGATT................................................................................................ 25 0 2 0.50 1 1 0 0
.....................................................................................................TAGCACTATTTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
............................................................ATGGTTTCACATGGTGGCTTAGAT................................................................................................. 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTGGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 0 1 0
.....................................................................................................TAGCACCATTTGATATCAGTGTTTT....................................................... 25 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCACTTGAACTCAGTGTTT........................................................ 24 2 2 0.50 1 1 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTCTTTT....................................................... 26 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGACATCACTGTTTA....................................................... 25 3 2 0.50 1 1 0 0
............................................................CTGGTTTCACATGGTGGCTTAGATTTT.............................................................................................. 27 0 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCGGTGTTT........................................................ 24 1 2 0.50 1 1 0 0
.....................................................................................................TTGCACCATTTGAAATCAGTGTTT........................................................ 24 1 2 0.50 1 0 1 0
....................................................................................................ATAGCACCATTTGACATCAGTGTTT........................................................ 25 2 2 0.50 1 1 0 0
.....................................................................................................TAGCACCTTTTGAAATCAGTGTTA........................................................ 24 2 3 0.33 1 0 1 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTAT....................................................... 25 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGCAATCAGTGTTAA....................................................... 25 3 3 0.33 1 1 0 0
......................................................................................................AGCGCCATTTGAAATCAGTGTTTAT...................................................... 25 3 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTGTTAA....................................................... 25 3 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTAAAATCAGTGTC......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCCTTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.........................................................................................................ACCATTTGAAATCAGTGTT......................................................... 19 0 3 0.33 1 0 1 0
.....................................................................................................TAGCATCATTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCAATTGAAATCAGTGT.......................................................... 22 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTTTAT...................................................... 26 3 3 0.33 1 1 0 0
...................................................................................................ACTAGCACCATTTGAAATCAGTGT.......................................................... 24 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTTCT...................................................... 26 3 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAACTAAGTGTT......................................................... 23 2 3 0.33 1 1 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTTT.......................................................... 23 2 3 0.33 1 0 1 0
..................................................................................................TTCTAGCACCATTTGAAATCAGTGTT......................................................... 26 1 3 0.33 1 0 1 0
..................................................................................................TGCTAGCACCATTTGAAATCAGTGTT......................................................... 26 2 3 0.33 1 0 1 0
....................................................................................................ATAGCACCATTTGAAATCAGTG........................................................... 22 1 3 0.33 1 0 1 0
....................................................................................................CTAGCACCCTTTGAAATCAGTTT.......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGCTAT....................................................... 25 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGCAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
....................................................................................................CTAGTACCATTTGAAATCAGTGT.......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAACTCAGTGTTTTT...................................................... 26 2 3 0.33 1 0 1 0
.....................................................................................................TAGCACCATTTGAAATCAGTGGTA........................................................ 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATATGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGACATCAGTGTTCAA...................................................... 26 3 3 0.33 1 1 0 0
......................................................................................................AGCACCATTTGAAATCAGTGTTAT....................................................... 24 1 3 0.33 1 1 0 0
....................................................................................................CTAACACCATTTGAAATCAGTGT.......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TTGCACCATTTGAAATCAGTGTTAA....................................................... 25 3 3 0.33 1 0 1 0
.......................................................................................................GCACCACTTGAAATCAGTGTT......................................................... 21 1 3 0.33 1 0 1 0
....................................................................................................CTAGCACCATTTGAAATCA.............................................................. 19 0 3 0.33 1 0 1 0
.....................................................................................................TAGCACCATTAGAAATCAGTGTTA........................................................ 24 2 3 0.33 1 0 1 0
.....................................................................................................TAGCACCAATTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 0 0 1
.....................................................................................................TAGAACCATTTGAACTCAGTGTT......................................................... 23 2 3 0.33 1 1 0 0
..........................................................................................................CCATTTGAAATCAGTGTT......................................................... 18 0 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAGTCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TTGCACCATTTGAAATCAGTGTTA........................................................ 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAACTCAGCGTT......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTATA..................................................... 27 3 3 0.33 1 1 0 0
.....................................................................................................TCGCACCATTTGAAATCAGTG........................................................... 21 1 3 0.33 1 0 1 0
.....................................................................................................TAGCACCATTTCAAATCAGTGTA......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCTTTTGAAATCCGTGTT......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTCGAAATCAGT............................................................ 20 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGATTTT...................................................... 26 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTAGAAATCAGTGT.......................................................... 22 1 3 0.33 1 0 1 0
....................................................................................................CTAGCACCATTTGAAATCAG............................................................. 20 0 3 0.33 1 1 0 0
....................................................................................................ATAGCACCATTTGAAATCAGTTTT......................................................... 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAGTGTTTCT...................................................... 26 2 3 0.33 1 1 0 0
....................................................................................................ATAGCACCATTTGAAGTCAGTGTT......................................................... 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATGAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAACACCATTTGAAATCAGTGT.......................................................... 22 1 3 0.33 1 1 0 0
.....................................................................................................CAGCACCATTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATAAGTTTT......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGATATCATTGTT......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCAATTGAACTCAGTGTTT........................................................ 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCGTTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACTATTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
....................................................................................................CTAGCACCATTTGACATCAGTGT.......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TACCACCATTTGACATCAGTGTT......................................................... 23 2 3 0.33 1 1 0 0
.....................................................................................................TAGCAACATTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 0 1 0
.....................................................................................................TACCACCATTTGAAATCAGTGTT......................................................... 23 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTAAAATCAGTGT.......................................................... 22 1 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCAATGTTA........................................................ 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATCTGAAATCAATGTTA........................................................ 24 3 3 0.33 1 1 0 0
.....................................................................................................TAGCACCATTTGAAATCATTGTTA........................................................ 24 2 3 0.33 1 1 0 0
.....................................................................................................TAGCACCGTTTGAAATCAGTGTTA........................................................ 24 2 3 0.33 1 1 0 0
......................................................................................................AGCACCATTTGAAAGCAGTGTT......................................................... 22 1 3 0.33 1 0 1 0

Anti-sense strand reads

CTGACCAAGAAGACTGACGTGAAGAGACGAAAGAAGTCACTCTAGGAGAAGAAGACCTTCGACCAAAGTGTACCACCGAATCTAAAAAGGTAGAAACATAGATCGTGGTAAACTTTAGTCACAAAATCCTCATTCTTAACGTCGTGTCGTCTCCCATCTGACGTCTCCTTGTCGACATGGG
*****************************************.(((((((((((((((((((((((.((((((.((.((((..............)))))))))))).)))))))))).))))))))).))))....********************************************* 		Read size # Mismatch Hit Count Total Norm Total GSM1528817
Adult_testes
.......................................................................ACCACCGAAACAAAAAAGGTA......................................................................................... 21 2 20 0.05 1 1

Generated: 04/30/2015 at 05:36 PM