ID:

rno-mir-29a

Coordinate:

chr4:58343931-58344018 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in read

Predicted structure

-34.0

Sense Strand Reads

GTACAACAGACAGAAGGCCCGGGCCTTCCCAATGCACATGACCTCTTGTGACCCCTTAGAGGATGACTGATTTCTTTTGGTGTTCAGAGTCAATAGAATTTTCTAGCACCATCTGAAATCGGTTATAATGATTGGGGAAAAGCACCATGCAGCTGACTCGAGACTAATCTATTGTTGACTTTGGAGCC
**************************************************.((((.......((((((((((((...(((((((.((((...........)))))))))))...)))))))))))).......))))...************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528819
10dpp_testes
GSM1528817
Adult_testes
GSM1528818
Adult_testes_Mili_IP
.......................................................................................................TAGCACCATCTGAAATCGGTTA............................................................... 22 0 1 4601.00 4601 3446 1130 25
.......................................................................................................TAGCACCATCTGAAATCGGTTAT.............................................................. 23 0 1 1304.00 1304 1169 129 6
.......................................................................................................TAGCACCATCTGAAATCGGTTAA.............................................................. 23 1 1 1285.00 1285 1127 157 1
.......................................................................................................TAGCACCATCTGAAATCGGTT................................................................ 21 0 1 1184.00 1184 476 700 8
......................................................................................................CTAGCACCATCTGAAATCGGTTA............................................................... 23 0 1 706.00 706 590 107 9
.................................................................ACTGATTTCTTTTGGTGTTCAGA.................................................................................................... 23 0 1 493.00 493 381 112 0
..........................................................................................................CACCATCTGAAATCGGTTA............................................................... 19 0 1 415.00 415 5 410 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGT.................................................................................................. 25 0 1 387.00 387 366 10 11
......................................................................................................CTAGCACCATCTGAAATCGGTT................................................................ 22 0 1 314.00 314 89 225 0
......................................................................................................CTAGCACCATCTGAAATCGGTTAT.............................................................. 24 0 1 212.00 212 190 22 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAG................................................................................................... 24 0 1 172.00 172 169 3 0
..........................................................................................................CACCATCTGAAATCGGTT................................................................ 18 0 1 168.00 168 0 168 0
........................................................................................................AGCACCATCTGAAATCGGTTA............................................................... 21 0 1 162.00 162 126 36 0
.......................................................................................................TAGCACCATCTGAAATCGGTTT............................................................... 22 1 1 140.00 140 68 72 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAA............................................................. 24 1 1 134.00 134 126 8 0
.......................................................................................................TAGCACCATCTGAAATCGGT................................................................. 20 0 1 114.00 114 22 91 1
...........................................................................................................ACCATCTGAAATCGGTTA............................................................... 18 0 1 95.00 95 1 94 0
......................................................................................................ATAGCACCATCTGAAATCGGTTA............................................................... 23 1 1 75.00 75 39 36 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATT............................................................. 24 1 1 69.00 69 58 11 0
......................................................................................................CTAGCACCATCTGAAATCGGTTAA.............................................................. 24 1 1 64.00 64 57 7 0
......................................................................................................CTAGCACCATCTGAAATCGGTTT............................................................... 23 1 1 62.00 62 42 20 0
........................................................................................................AGCACCATCTGAAATCGGTT................................................................ 20 0 1 61.00 61 31 30 0
........................................................................................................AGCACCATCTGAAATCGGTTAT.............................................................. 22 0 1 56.00 56 52 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAT............................................................. 24 2 1 56.00 56 53 3 0
..........................................................................................................CACCATCTGAAATCGGTTAT.............................................................. 20 0 1 49.00 49 1 48 0
..........................................................................................................CACCATCTGAAATCGGTTAA.............................................................. 20 1 1 47.00 47 1 46 0
...........................................................................................................ACCATCTGAAATCGGTT................................................................ 17 0 1 43.00 43 0 43 0
......................................................................................................CTAGCACCATCTGAAATCGGT................................................................. 21 0 1 43.00 43 7 36 0
.......................................................................................................TAGCACCATCTGAAATCGG.................................................................. 19 0 1 41.00 41 5 36 0
.......................................................................................................TAGCACCATCTGACATCGGTTA............................................................... 22 1 1 39.00 39 39 0 0
........................................................................................................AGCACCATCTGAAATCGGTTAA.............................................................. 22 1 1 39.00 39 32 7 0
......................................................................................................ATAGCACCATCTGAAATCGGTT................................................................ 22 1 1 30.00 30 4 26 0
.......................................................................................................TAGCACCATCTGAACTCGGTTA............................................................... 22 1 1 29.00 29 25 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTAA............................................................... 22 1 1 24.00 24 14 10 0
......................................................................................................ATAGCACCATCTGAAATCGGTTAT.............................................................. 24 1 1 23.00 23 21 2 0
.......................................................................................................TAGCACCATCTGAAATCGGTTC............................................................... 22 1 1 23.00 23 19 2 2
.................................................................ACTGATTTCTTTTGGTGTTCAGATCG................................................................................................. 26 3 1 22.00 22 0 0 22
.......................................................................................................TAGCACCATTTGAAATCGGTTAAA............................................................. 24 2 3 21.00 63 62 0 1
.......................................................................................................TAGCACCATCTGAAATCGGTTAAAA............................................................ 25 1 1 19.00 19 16 3 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAG.............................................................. 23 1 1 18.00 18 14 4 0
......................................................................................................ATAGCACCATCTGAAATCGGTTAA.............................................................. 24 2 1 18.00 18 14 4 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGA.................................................................................................. 25 1 1 18.00 18 16 2 0
..........................................................................................................CACCATCTGAAATCGGT................................................................. 17 0 1 18.00 18 0 18 0
.................................................................ACTGATTTCTTTTGGTGTTCAGACG.................................................................................................. 25 2 1 18.00 18 0 0 18
.......................................................................................................TAGCACCATCTGAAATCGGTTTT.............................................................. 23 1 1 17.00 17 14 3 0
.................................................................ACTGATTTCTTTTGGTGTTCA...................................................................................................... 21 0 1 16.00 16 13 3 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATTT............................................................ 25 2 1 16.00 16 16 0 0
.........................................................................................................GCACCATCTGAAATCGGTTA............................................................... 20 0 1 16.00 16 9 7 0
...........................................................................................................ACCATCTGAAATCGGTTAT.............................................................. 19 0 1 15.00 15 0 15 0
.......................................................................................................TAGCACCATCTGAAATCGGTTG............................................................... 22 1 1 14.00 14 10 4 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGCG................................................................................................. 26 2 1 14.00 14 0 0 14
.............................................................................................................CATCTGAAATCGGTTA............................................................... 16 0 3 13.33 40 0 40 0
.......................................................................................................TAGCACCATCTGACATCGGTTAA.............................................................. 23 2 1 13.00 13 11 2 0
.......................................................................................................TAGCACCATCTGAACTCGGTTAA.............................................................. 23 2 1 13.00 13 13 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAC.............................................................. 23 1 1 13.00 13 13 0 0
..............................................................................................................ATCTGAAATCGGTTA............................................................... 15 0 3 13.00 39 0 39 0
.......................................................................................................TAGCACCATCTGACATCGGTTAT.............................................................. 23 1 1 13.00 13 13 0 0
.................................................................ACTGATTTCTTTTGGTGTTCAG..................................................................................................... 22 0 1 12.00 12 7 5 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAA................................................................................................... 24 1 1 12.00 12 12 0 0
.................................................................ACTGATTTCTTTTGGTGTTC....................................................................................................... 20 0 1 12.00 12 10 2 0
...........................................................................................................ACCATCTGAAATCGGTTAA.............................................................. 19 1 1 12.00 12 0 12 0
.......................................................................................................TATCACCATCTGAAATCGGTTA............................................................... 22 1 1 11.00 11 4 7 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATA............................................................. 24 0 1 11.00 11 11 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTCT.............................................................. 23 1 1 10.00 10 10 0 0
............................................................................................................CCATCTGAAATCGGTTA............................................................... 17 0 1 10.00 10 0 10 0
.................................................................ACTGATTTCTTTTGGTGTTCAGT.................................................................................................... 23 1 1 10.00 10 6 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTTCA.............................................................. 23 2 1 10.00 10 10 0 0
.......................................................................................................TAGCACCATCTGATATCGGTTA............................................................... 22 1 1 10.00 10 10 0 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAT................................................................................................... 24 1 1 9.00 9 8 1 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAAAA........................................................... 26 2 1 9.00 9 7 2 0
.......................................................................................................TAGCACCATCTGAACTCGGTTAT.............................................................. 23 1 1 9.00 9 9 0 0
............................................................................................................CCATCTGAAATCGGTT................................................................ 16 0 1 9.00 9 0 9 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGTT................................................................................................. 26 1 1 9.00 9 8 1 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAAA.................................................................................................. 25 2 1 8.00 8 4 4 0
.......................................................................................................TAACACCATCTGAAATCGGTTA............................................................... 22 1 1 8.00 8 4 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTCG............................................................... 22 2 1 8.00 8 0 0 8
........................................................................................................AGCACCATCTGAAATCGGTTAAA............................................................. 23 1 1 8.00 8 8 0 0
.........................................................................................................GCACCATCTGAAATCGGTT................................................................ 19 0 1 7.00 7 5 2 0
..................................................................CTGATTTCTTTTGGTGTTCAGA.................................................................................................... 22 0 1 7.00 7 3 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATTTT........................................................... 26 2 1 7.00 7 7 0 0
......................................................................................................CTAGCACCATCTGAAATCGGTTAAA............................................................. 25 1 1 7.00 7 7 0 0
..........................................................................................................CACCATCTGAAATCGGTTT............................................................... 19 1 2 7.00 14 0 14 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAAT............................................................ 25 2 1 7.00 7 6 1 0
.........................................................................................................ACACCATCTGAAATCGGTT................................................................ 19 1 1 7.00 7 0 7 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAATT............................................................ 25 3 1 7.00 7 7 0 0
........................................................................................................AGCACCATCTGAAATCGGTTT............................................................... 21 1 1 7.00 7 2 5 0
......................................................................................................CTAGCACCATCTGAAATCGG.................................................................. 20 0 1 7.00 7 0 7 0
.......................................................................................................TAGCACCATCTGAACTCGGTT................................................................ 21 1 1 7.00 7 6 1 0
.......................................................................................................TAGCACCATCTGACATCGGTT................................................................ 21 1 1 7.00 7 7 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTACT............................................................. 24 2 1 6.00 6 6 0 0
.......................................................................................................GAGCACCATCTGAAATCGGTTA............................................................... 22 1 1 6.00 6 2 4 0
.......................................................................................................TCGCACCATCTGAAATCGGTTA............................................................... 22 1 1 6.00 6 1 5 0
......................................................................................................ATAGCACCATCTGAAATCGGT................................................................. 21 1 1 6.00 6 0 6 0
......................................................................................................ATAGCACCATCTGAAATCGGTTT............................................................... 23 2 1 6.00 6 3 3 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAC............................................................. 24 2 1 6.00 6 6 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATTA............................................................ 25 1 1 5.00 5 5 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTGT.............................................................. 23 1 1 5.00 5 5 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTA................................................................ 21 1 2 5.00 10 8 2 0
.......................................................................................................TAGAACCATCTGAAATCGGTTA............................................................... 22 1 1 5.00 5 5 0 0
........................................................................................................AGCACCATCTGAAATCGGTTAAAT............................................................ 24 2 1 5.00 5 5 0 0
......................................................................................................CTAGCACCATCTGACATCGGTTA............................................................... 23 1 1 5.00 5 4 1 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGA............................................................. 24 1 1 5.00 5 5 0 0
.......................................................................................................TTGCACCATCTGAAATCGGTT................................................................ 21 1 1 5.00 5 0 5 0
.....................................................................................................AATAGCACCATCTGAAATCGGTT................................................................ 23 2 1 5.00 5 2 3 0
.......................................................................................................TAGAACCATCTGAACTCGGTTA............................................................... 22 2 1 5.00 5 5 0 0
.....................................................................................................ACTAGCACCATCTGAAATCGGTT................................................................ 23 1 1 5.00 5 0 5 0
......................................................................................................CTAGCACCATCTGCAATCGGTTA............................................................... 23 1 1 5.00 5 5 0 0
.......................................................................................................TAGCACCATCTGAATTCGGTTA............................................................... 22 1 1 5.00 5 2 3 0
......................................................................................................CTAGCACCATCTGAAATCGGTA................................................................ 22 1 1 5.00 5 1 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTTTAA............................................................. 24 2 1 5.00 5 5 0 0
.....................................................................................................AATAGCACCATCTGAAATCGGTTA............................................................... 24 2 1 5.00 5 5 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTGA.............................................................. 23 2 1 5.00 5 5 0 0
.......................................................................................................TAGCACCATCTGAAATCG................................................................... 18 0 1 5.00 5 0 5 0
.......................................................................................................TAGCACCATCTGAAATCGATTA............................................................... 22 1 1 5.00 5 3 2 0
.............................................................................................................CATCTGAAATCGGTT................................................................ 15 0 5 4.40 22 0 22 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATAT............................................................ 25 1 1 4.00 4 3 0 1
.......................................................................................................TAGCACCATCTGAAATCGGTTAAATT........................................................... 26 2 1 4.00 4 4 0 0
................................................................GACTGATTTCTTTTGGTGTTCAGAA................................................................................................... 25 1 1 4.00 4 4 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGT............................................................. 24 2 1 4.00 4 4 0 0
.......................................................................................................TAGCACCATCTGAAATAGGTTA............................................................... 22 1 1 4.00 4 3 1 0
........................................................................................................AGCACCATCTGAAATCGGT................................................................. 19 0 1 4.00 4 0 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTCA............................................................... 22 1 1 4.00 4 2 2 0
.......................................................................................................TAGCACCATCTAAAATCGGTTA............................................................... 22 1 1 4.00 4 4 0 0
.......................................................................................................TAGAACCATCTGACATCGGTTA............................................................... 22 2 1 4.00 4 4 0 0
.......................................................................................................TAGCACCATCTGAAATCAGTTAT.............................................................. 23 1 1 4.00 4 2 2 0
.......................................................................................................TAGCACCATCTCAAATCGGTTAA.............................................................. 23 2 1 4.00 4 3 1 0
.......................................................................................................TAGCACCATCTGAAATCGGA................................................................. 20 1 1 4.00 4 1 3 0
.......................................................................................................TAGCACTATCTGAAATCGGTT................................................................ 21 1 1 4.00 4 3 1 0
.......................................................................................................TGGCACCATCTGAAATCGGTTA............................................................... 22 1 1 4.00 4 1 3 0
......................................................................................................CTAGCACCCTCTGACATCGGTTA............................................................... 23 2 1 4.00 4 4 0 0
..........................................................................................................CACCATCTGAAATCGGTTAAA............................................................. 21 1 1 4.00 4 0 4 0
.......................................................................................................TAGCACCATCCGAAATCGGTTAA.............................................................. 23 2 1 4.00 4 4 0 0
.......................................................................................................TAGCACCATCCGAAATCGGTTA............................................................... 22 1 1 4.00 4 4 0 0
................................................................AACTGATTTCTTTTGGTGTTCAGAG................................................................................................... 25 1 1 4.00 4 4 0 0
.............................................................................................................CATCTGAAATCGGTTAT.............................................................. 17 0 2 4.00 8 0 8 0
.......................................................................................................TAGCACCATCTGAAGTCGGTTA............................................................... 22 1 1 4.00 4 1 3 0
..................................................................CTGATTTCTTTTGGTGTTCAGAGT.................................................................................................. 24 0 1 4.00 4 4 0 0
..........................................................................................................CTCCATCTGAAATCGGTTA............................................................... 19 1 1 4.00 4 0 4 0
.......................................................................................................TAGCACCATCTGAAATCGGTTTTT............................................................. 24 2 1 4.00 4 4 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTCAT.............................................................. 23 1 1 4.00 4 4 0 0
.......................................................................................................TAGCACCCTCTGAAATCGGTTAT.............................................................. 23 1 1 4.00 4 4 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAG............................................................. 24 2 3 3.67 11 11 0 0
.................................................................ACTGATTTCTTTTGGTGTTCAGTCG.................................................................................................. 25 3 2 3.50 7 0 0 7
.......................................................................................................TATCACCATCTGAAATCGGTT................................................................ 21 1 1 3.00 3 0 3 0
.......................................................................................................TAGCACCATCTGAACTCGGTTAAA............................................................. 24 2 1 3.00 3 3 0 0
......................................................................................................CTAGCACCATCTGAAATCGGTTATT............................................................. 25 1 1 3.00 3 3 0 0
......................................................................................................CTAGCACCATCTGAAATCGGTTAC.............................................................. 24 1 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAAAAA.......................................................... 27 3 1 3.00 3 2 1 0
.......................................................................................................TACCACCATCTGAAATCGGTT................................................................ 21 1 1 3.00 3 0 3 0
.......................................................................................................TAGCACCATCTGAAATCGGTTTA.............................................................. 23 2 1 3.00 3 3 0 0
.................................................................ACTGATTTCTTTTGGTGTTCAT..................................................................................................... 22 1 1 3.00 3 3 0 0
.................................................................ACTGCTTTCTTTTGGTGTTCAGAG................................................................................................... 24 1 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTGAAATCGGCT................................................................ 21 1 1 3.00 3 1 2 0
.......................................................................................................TAGCCCCATCTGAAATCGGTTA............................................................... 22 1 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTCAAATCGGTTA............................................................... 22 1 1 3.00 3 3 0 0
..........................................................................................................CACCATCTGAAATCGGTTATT............................................................. 21 1 1 3.00 3 0 3 0
.....................................................................................................ACTAGCACCATCTGAAATCGGTTA............................................................... 24 1 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTTAAATCGGTTA............................................................... 22 1 1 3.00 3 2 1 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGC.................................................................................................. 25 1 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTGCAATCGGTTA............................................................... 22 1 1 3.00 3 3 0 0
...................................................................TGATTTCTTTTGGTGTTCAGAGT.................................................................................................. 23 0 1 3.00 3 3 0 0
........................................................................................................AGCACCATCTGAAATCGGTTATT............................................................. 23 1 1 3.00 3 0 3 0
.......................................................................................................TAGCACCATCGGAAATCGGTTA............................................................... 22 1 1 3.00 3 0 3 0
.......................................................................................................TAGCACCATCTGAGATCGGTTA............................................................... 22 1 1 3.00 3 2 1 0
.......................................................................................................TAGCACCATCGGAAATCGGTTAA.............................................................. 23 2 1 3.00 3 1 2 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAGT............................................................ 25 3 3 3.00 9 9 0 0
......................................................................................................CTAGCACCATCTGAAATCGGTAA............................................................... 23 1 1 3.00 3 1 2 0
...........................................................................................................ACCATCTGAAATCGGTTAAA............................................................. 20 1 1 3.00 3 0 3 0
...........................................................................................................ACCATCTGAAATCGGT................................................................. 16 0 1 3.00 3 0 3 0
.................................................................ACTGATTTCTTTTGGTGTT........................................................................................................ 19 0 1 3.00 3 2 1 0
.......................................................................................................TAGCACCATCGGAAATCGGTT................................................................ 21 1 1 3.00 3 0 3 0
.........................................................................................................GCACCATCTGAAATCGGTTAA.............................................................. 21 1 1 3.00 3 2 1 0
.......................................................................................................TAGCACCCTCTGAAATCGGTTA............................................................... 22 1 1 3.00 3 2 1 0
........................................................................................................AGCACCATCTGAACTCGGTTA............................................................... 21 1 1 3.00 3 3 0 0
.......................................................................................................AAGCACCATCTGAAATCGGTTA............................................................... 22 1 1 3.00 3 2 1 0
........................................................................................................AGCACCATCTGAAATCGGTTAC.............................................................. 22 1 1 3.00 3 3 0 0
.......................................................................................................TAGAACCATCTGAAATCGGTT................................................................ 21 1 1 3.00 3 1 2 0
...................................................................................................AAACTAGCACCATCTGAAATCGGTTAT.............................................................. 27 3 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTGAAATCGGCTAT.............................................................. 23 1 1 3.00 3 2 1 0
.......................................................................................................TAGCACCATCCGAAATCGGTTAT.............................................................. 23 1 1 3.00 3 3 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTAAA.............................................................. 23 2 1 3.00 3 2 1 0
......................................................................................................CTAGCACCATCTGCAATCGGTT................................................................ 22 1 1 3.00 3 2 1 0
......................................................................................................CTAGCACCATCTGAAATCGGA................................................................. 21 1 1 3.00 3 0 3 0
..............................................................................................................ATCTGAAATCGGTTAT.............................................................. 16 0 2 2.50 5 0 5 0
.......................................................................................................TAGCACCATTTGAAATCGGTTATA............................................................. 24 1 3 2.33 7 7 0 0
........................................................................................................AGCACCATCTAAAATCGGTTA............................................................... 21 1 1 2.00 2 2 0 0
......................................................................................................ATAGCACCATCTGAGATCGGTTA............................................................... 23 2 1 2.00 2 1 1 0
.......................................................................................................TAGGACCATCTGAAATCGGTT................................................................ 21 1 1 2.00 2 1 1 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGC............................................................. 24 2 1 2.00 2 2 0 0
......................................................................................................CTAGCACCATCTGAAATCG................................................................... 19 0 1 2.00 2 0 2 0
......................................................................................................ATAGCACCCTCTGAAATCGGTTA............................................................... 23 2 1 2.00 2 2 0 0
........................................................................................................AGCACCATCTGACATCGGTTA............................................................... 21 1 1 2.00 2 2 0 0
.......................................................................................................TAACACCATCTGAAATCGGTTAA.............................................................. 23 2 1 2.00 2 1 1 0
..........................................................................................................CACCATCTGAAATCGGTTAC.............................................................. 20 1 1 2.00 2 0 2 0
.......................................................................................................TAGCACCATCTGAAATCGGGT................................................................ 21 1 1 2.00 2 1 1 0
......................................................................................................CTAGCACCATCTGCAATCGGTTAT.............................................................. 24 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAAGA............................................................ 25 2 3 2.00 6 6 0 0
.......................................................................................................TAGCACCATCTGAATTCGGTTAA.............................................................. 23 2 1 2.00 2 1 1 0
.......................................................................................................CAGCACCATCTGAAATCGGTTA............................................................... 22 1 1 2.00 2 1 1 0
.......................................................................................................TATCACCATCTGAAATCGGTTAA.............................................................. 23 2 1 2.00 2 1 1 0
.......................................................................................................TAGCACCATCTGAAATTGGTTA............................................................... 22 1 1 2.00 2 2 0 0
......................................................................................................CTAGCACCATCTGAAATCGGTC................................................................ 22 1 1 2.00 2 0 2 0
......................................................................................................ATAGCACCATCTGAAATCGGTTAAC............................................................. 25 3 1 2.00 2 2 0 0
.......................................................................................................TGGCACCATCTGAAATCGGTT................................................................ 21 1 1 2.00 2 0 2 0
.......................................................................................................TAGCACCATCTGAAACCGGTTA............................................................... 22 1 1 2.00 2 0 2 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGTC................................................................................................. 26 0 1 2.00 2 2 0 0
........................................................................................................AGCACCATCTGAAATCGGTTAG.............................................................. 22 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGATATCGGTTAT.............................................................. 23 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGGTA............................................................... 22 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTCAA.............................................................. 23 2 1 2.00 2 1 1 0
.......................................................................................................TAGCACCATCTGAAATCAGTTA............................................................... 22 1 1 2.00 2 2 0 0
...........................................................................................................ACCATCTGAAATCGCTTA............................................................... 18 1 1 2.00 2 0 2 0
.......................................................................................................TAGCACCATCTGAAATCGGCTA............................................................... 22 1 1 2.00 2 2 0 0
......................................................................................................ATAGCACCATCTGCAATCGGTTA............................................................... 23 2 1 2.00 2 2 0 0
......................................................................................................CTAGCACCATCTGAAATCGGTTTA.............................................................. 24 2 1 2.00 2 2 0 0
.................................................................ACTGATTTCCTTTGGTGTTCAGA.................................................................................................... 23 1 1 2.00 2 2 0 0
.................................................................ACTGATTTCTTTTGGTGTTCAGATT.................................................................................................. 25 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGCTTA............................................................... 22 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACAATCTGAAATCGGTTA............................................................... 22 1 1 2.00 2 2 0 0
.......................................................................................................TAACACCATCTGAAATCGGTT................................................................ 21 1 1 2.00 2 0 2 0
.................................................................ACTGATTTCTTTTGGTGTTCAGAGTAA................................................................................................ 27 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACAATCTGAAATCGGTTAA.............................................................. 23 2 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGGTAA.............................................................. 23 2 1 2.00 2 2 0 0
.......................................................................................................TTGCACCATCTGAAATCGGTTA............................................................... 22 1 1 2.00 2 0 2 0
......................................................................................................CTAGCACTATCTGAAATCGGTTT............................................................... 23 2 1 2.00 2 0 2 0
.......................................................................................................TGGCACCATCTGAAATCGGTTAT.............................................................. 23 1 1 2.00 2 2 0 0
......................................................................................................CTCGCACCATCTGCAATCGGTTA............................................................... 23 2 1 2.00 2 2 0 0
.................................................................CCTGATTTCTTTTGGTGTTCAGAGT.................................................................................................. 25 1 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATAA............................................................ 25 0 1 2.00 2 2 0 0
......................................................................................................CTGGCACCATCTGAAATCGGTT................................................................ 22 1 1 2.00 2 0 2 0
.................................................................ACTGATTTCTTTTGGCGTTCAGAGT.................................................................................................. 25 1 1 2.00 2 2 0 0
.......................................................................................................TTGCACCATCTGAAATCGGTTAT.............................................................. 23 1 1 2.00 2 0 2 0
......................................................................................................CTATCACCATCTGAAATCGGTTA............................................................... 23 1 1 2.00 2 2 0 0
......................................................................................................CCAGCACCATCTGAAATCGGTT................................................................ 22 1 1 2.00 2 0 2 0
......................................................................................................CTAGCACCATCTGAAATCGGTTATTTTT.......................................................... 28 3 1 2.00 2 2 0 0
.......................................................................................................TAGCACTATCTGAAATCGGTTA............................................................... 22 1 1 2.00 2 1 1 0
........................................................................................................ACCACCATCTGAAATCGGTTA............................................................... 21 1 1 2.00 2 0 2 0
.......................................................................................................TAGCACCATCTGAAATCGGTTCTT............................................................. 24 2 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTTATTTTT.......................................................... 27 3 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTAAAATCGGTTAA.............................................................. 23 2 1 2.00 2 2 0 0
......................................................................................................CTAGCACCCTCTGAAATCGGTCAT.............................................................. 24 2 1 2.00 2 2 0 0
.......................................................................................................TAGCACCACCTGAAATCGGTTA............................................................... 22 1 1 2.00 2 1 1 0
...................................................................TGATTTCTTTTGGTGTTCAGA.................................................................................................... 21 0 1 2.00 2 2 0 0
.......................................................................................................CAGCACCATCTGAAATCGGTTAA.............................................................. 23 2 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATCTGAAATAGGTTAT.............................................................. 23 1 1 2.00 2 2 0 0
.................................................................ACTGATTTCTTTTGGTGTTCAGTT................................................................................................... 24 2 1 2.00 2 1 1 0
.................................................................ACTGATTTCTTTTGGGGTTCAGAGT.................................................................................................. 25 1 1 2.00 2 2 0 0
................................................................CACTGATTTCTTTTGGTGTTCAGAGT.................................................................................................. 26 1 1 2.00 2 2 0 0
.....................................................................................................CTTAGCACCATCTGAAATCGGTTA............................................................... 24 2 1 2.00 2 0 2 0
.......................................................................................................TACCACCATCTGAAATCGGTTA............................................................... 22 1 1 2.00 2 1 1 0
.......................................................................................................TAACACCATCTGAAATCGGTTAT.............................................................. 23 1 1 2.00 2 1 1 0
.......................................................................................................TACCACCATCTGAAATCGGTTAT.............................................................. 23 1 1 2.00 2 1 1 0
.......................................................................................................TAGCACCATCTGAAATCGGTTCAA............................................................. 24 2 1 2.00 2 2 0 0
.......................................................................................................TAGCACCATATGAAATCGGTTA............................................................... 22 1 3 1.67 5 4 1 0
.................................................................ACTGATTTCTTTTGGTGTTCAAA.................................................................................................... 23 1 2 1.50 3 3 0 0
...........................................................................................................ACCATCTGAAATCGGTTT............................................................... 18 1 3 1.33 4 0 4 0
.......................................................................................................TAGCACCATTTGAAATCGGTTAAAT............................................................ 25 3 4 1.25 5 5 0 0
......................................................................................................CTCGCACCATCAGAAATCGGTTAT.............................................................. 24 2 1 1.00 1 1 0 0
..........................................................................................................CACCACCTGAAATCGGTTA............................................................... 19 1 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCTGAAATCGGATT............................................................... 22 2 1 1.00 1 1 0 0
.......................................................................................................TGGCACCATCTGAAATCGGTTAAA............................................................. 24 2 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCTGAAATCGGTTAGTT............................................................ 25 3 1 1.00 1 1 0 0
.................................................................ACTGATTTATTTTGGTGTTCAGAGT.................................................................................................. 25 1 1 1.00 1 1 0 0
.................................................................ACTGTTTTCTTTTGGTGTTCAGA.................................................................................................... 23 1 1 1.00 1 1 0 0
.................................................................ACTGATTTCTTTTGGTGTTAAGA.................................................................................................... 23 1 1 1.00 1 0 1 0
......................................................................................................CTAGCATCATCTGAAATCGGTT................................................................ 22 1 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCAGAAATCGGTTAA.............................................................. 23 2 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCTGAAGTCGGTT................................................................ 21 1 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCTGAAATCGATT................................................................ 21 1 1 1.00 1 1 0 0
.................................................................ACTGATTTCCTTTGGTGTTCAGAGT.................................................................................................. 25 1 1 1.00 1 1 0 0
.................................................................CCTGATTTCTTTTGGTGTTCAGAGA.................................................................................................. 25 2 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCTGAAATCGGTAAT.............................................................. 23 1 1 1.00 1 1 0 0
..........................................................................................................CACCATCTGAAATCGGCTA............................................................... 19 1 1 1.00 1 0 1 0
.......................................................................................................TAGCACCACCTGAAATCGGTTAAAA............................................................ 25 2 1 1.00 1 1 0 0
.......................................................................................................TGGCACCATCTGAAATCGGTTAA.............................................................. 23 2 1 1.00 1 1 0 0
..........................................................................................................CACCATCTGAAATCGGTTAG.............................................................. 20 1 1 1.00 1 0 1 0
.................................................................ACTGATTTCTTTTGGTATTCAGAGT.................................................................................................. 25 1 1 1.00 1 1 0 0
......................................................................................................CTAGCACCATCTGGAATCGGTT................................................................ 22 1 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCTGAAATCGGTTGAC............................................................. 24 3 1 1.00 1 1 0 0
......................................................................................................CTAGCACCATCTGAAATCGGATAT.............................................................. 24 1 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCTGAAAACGGT................................................................. 20 1 1 1.00 1 1 0 0
..................................................................................................TGAACTAGCACCATCTGAAATCGGTTA............................................................... 27 3 1 1.00 1 0 1 0
......................................................................................................CTAGCACCATCTGAAGTCGGT................................................................. 21 1 1 1.00 1 0 1 0
........................................................................................................AGCACCATCTAAAATCGGT................................................................. 19 1 1 1.00 1 0 1 0
.......................................................................................................TAACACCATCTGAAATAGGTTAT.............................................................. 23 2 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCTGAAATCGTTT................................................................ 21 1 1 1.00 1 0 1 0
.......................................................................................................CTGCACCATCTGAAATCGGTTAT.............................................................. 23 2 1 1.00 1 0 1 0
.......................................................................................................TAGAACCATCTGAACTCGGTT................................................................ 21 2 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCTGAAATCTGTTAT.............................................................. 23 1 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCTGAAATCCGTTA............................................................... 22 1 1 1.00 1 1 0 0
...................................................................................................AAACTAGCACCATCTGAAATCGGTT................................................................ 25 3 1 1.00 1 0 1 0
......................................................................................................ATAGCACCATCTGATATCGGTTA............................................................... 23 2 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCTGTAATCGTTTA............................................................... 22 2 1 1.00 1 1 0 0
.......................................................................................................TAGCACGATCTGAAATCGGTT................................................................ 21 1 1 1.00 1 1 0 0
.......................................................................................................TAGCACGATCTGAAATCGGTTAAA............................................................. 24 2 1 1.00 1 1 0 0
.................................................................ACTGATTTCTTTTCGTGTTCAGA.................................................................................................... 23 1 1 1.00 1 1 0 0
......................................................................................................CTAGCACAATCTGAAATCGGTTAT.............................................................. 24 1 1 1.00 1 1 0 0
......................................................................................................CTCGCACCATCCGAAATCGGTTA............................................................... 23 2 1 1.00 1 1 0 0
.......................................................................................................TAGCACCATCCGAAATCGGTT................................................................ 21 1 1 1.00 1 0 1 0
.......................................................................................................TAGCACCATCGGAAATCGGTTT............................................................... 22 2 1 1.00 1 0 1 0
.......................................................................................................TAGCACCAACTGAAATCGGT................................................................. 20 1 1 1.00 1 1 0 0

Anti-sense strand reads

CATGTTGTCTGTCTTCCGGGCCCGGAAGGGTTACGTGTACTGGAGAACACTGGGGAATCTCCTACTGACTAAAGAAAACCACAAGTCTCAGTTATCTTAAAAGATCGTGGTAGACTTTAGCCAATATTACTAACCCCTTTTCGTGGTACGTCGACTGAGCTCTGATTAGATAACAACTGAAACCTCGG
************************************************.((((.......((((((((((((...(((((((.((((...........)))))))))))...)))))))))))).......))))...**************************************************
Read size # Mismatch Hit Count Total Norm Total GSM1528817
Adult_testes
....................CCCGGAAGCGTTACG......................................................................................................................................................... 15 1 20 0.05 1 1

Generated: 04/30/2015 at 05:44 PM