ID:rno-mir-298 |
Coordinate:chr3:172357943-172358024 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
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GGTAGGCTGGGAAGTTCCTGCTGTGCTTGAAAGAAGAGATACCTAAAGGCCCAGGCCTTCGGCAGAGGAGGGCTGTTCTTCCCTTGGGTTTTATGACTGGGAGGAACTAGCCTTCTCTCTGCTTAGGAGTGGGCCAACAGTTTCCTTCATTCAGACTCCGGCGGAAGGCTGCTGGCTGACAC
*********************************************..((((((..(((..(((((((((((((((((((((((...((((....))))))))))))).))))))).))))))).)))..))))))....******************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM1528819 10dpp_testes |
GSM1528818 Adult_testes_Mili_IP |
GSM1528817 Adult_testes |
|---|---|---|---|---|---|---|---|---|
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTT......................................................... | 24 | 1 | 1 | 193.00 | 193 | 193 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTT.......................................................... | 23 | 0 | 1 | 127.00 | 127 | 125 | 0 | 2 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTT........................................................ | 25 | 2 | 1 | 114.00 | 114 | 113 | 0 | 1 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTA......................................................... | 24 | 0 | 1 | 67.00 | 67 | 67 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTA........................................................ | 25 | 2 | 1 | 50.00 | 50 | 50 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAA........................................................ | 25 | 1 | 1 | 47.00 | 47 | 47 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTAA....................................................... | 26 | 3 | 1 | 42.00 | 42 | 42 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTT.......................................................... | 24 | 0 | 1 | 39.00 | 39 | 38 | 0 | 1 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGA............................................................ | 22 | 1 | 1 | 36.00 | 36 | 36 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCT........................................................... | 23 | 0 | 1 | 20.00 | 20 | 17 | 0 | 3 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAT........................................................ | 25 | 1 | 1 | 20.00 | 20 | 20 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTCG......................................................... | 24 | 2 | 1 | 18.00 | 18 | 0 | 18 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTCG........................................................ | 26 | 1 | 1 | 18.00 | 18 | 0 | 18 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTTA....................................................... | 26 | 3 | 1 | 17.00 | 17 | 17 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTGA....................................................... | 26 | 2 | 1 | 14.00 | 14 | 14 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTAAA...................................................... | 27 | 3 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTTAA...................................................... | 27 | 3 | 1 | 13.00 | 13 | 13 | 0 | 0 |
| ................................................................GAGGAGGGCTGTTCTTCCCTTGGGTTCG.......................................................................................... | 28 | 2 | 1 | 12.00 | 12 | 0 | 12 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTCG........................................................ | 24 | 1 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAAA....................................................... | 26 | 2 | 1 | 11.00 | 11 | 11 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTT......................................................... | 25 | 1 | 1 | 10.00 | 10 | 10 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCT........................................................... | 22 | 0 | 1 | 9.00 | 9 | 9 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGC............................................................ | 22 | 0 | 1 | 9.00 | 9 | 4 | 0 | 5 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCT.................................................................................................. | 24 | 0 | 1 | 7.00 | 7 | 7 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTAT....................................................... | 26 | 3 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTTT........................................................ | 26 | 2 | 1 | 6.00 | 6 | 6 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTAT......................................................... | 24 | 2 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTT......................................................... | 23 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTAA......................................................... | 24 | 1 | 1 | 5.00 | 5 | 5 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTTT....................................................... | 26 | 3 | 2 | 4.50 | 9 | 9 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTAAA....................................................... | 27 | 2 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCTT................................................................................................. | 25 | 0 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCA.................................................................................................. | 24 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ....................................................................................................AAGGAACTAGCCTTCTCTCTGCTT.......................................................... | 24 | 1 | 1 | 4.00 | 4 | 4 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCAT................................................................................................. | 25 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTA.......................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTT.......................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTA......................................................... | 23 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTCT......................................................... | 24 | 2 | 1 | 3.00 | 3 | 2 | 1 | 0 |
| .....................................................................................................AGGCACTAGCCTTCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCA........................................................... | 22 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTAA......................................................... | 25 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTAA........................................................ | 26 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................TAGGAACTAGCCTTCTCTCTGCTT.......................................................... | 24 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCC.................................................................................................... | 22 | 0 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGAT........................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTTA........................................................ | 24 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGA............................................................ | 21 | 1 | 2 | 3.00 | 6 | 5 | 0 | 1 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAAT....................................................... | 26 | 2 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTTTA....................................................... | 25 | 3 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTA.......................................................... | 23 | 1 | 1 | 3.00 | 3 | 3 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTTTT....................................................... | 27 | 3 | 2 | 2.50 | 5 | 5 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTATCTCTGCTTT......................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTATCTCTGCTTTA........................................................ | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCT.............................................................. | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAG........................................................ | 25 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .................................................................AGGAGGGCTGTTCTTCCCTTTGT.............................................................................................. | 23 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCT........................................................... | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCTAT................................................................................................ | 26 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTG............................................................. | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................AAGGAACTAGCCTTCTCTCTGCTTT......................................................... | 25 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ....................................................................................................GAGGAACTAGACTTCTCTCTGA............................................................ | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGGA........................................................... | 22 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTG............................................................. | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCATT......................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTT...................................................................................................... | 20 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGC............................................................ | 21 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCC................................................................................................... | 23 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCAT.................................................................................................. | 24 | 1 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCATCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTATCTCTGCTTTT........................................................ | 25 | 3 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| ..................................................................GGAGGGCTGTTCTTCCCT.................................................................................................. | 18 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 |
| .....................................................................................................AGGAACTAGCATTCTCTCTGCTT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCCTA......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTATCTCTGC............................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTGT........................................................ | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................CGGAACTAGCCTTCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCGCTCTGCTA.......................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GATGAACTAGCCTTCTCTCTGCTTAAA....................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCTTTCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................AGGAGGGCTGTTCTTCCCTTT................................................................................................ | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................AGAGGAACTAGCCTTCTCTCTGCTT.......................................................... | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTG.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCGT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCAA.................................................................................................. | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGATA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAACA...................................................... | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .................................................................................................TTTTAGGAACTAGCCTTCTCTCTGC............................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGATTT......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTAT......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTGT......................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................GAGGAGGGCTGTTCTTCCCAT................................................................................................. | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTCGCCTTCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCTTTAT....................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCCTTA........................................................ | 25 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 |
| .............................................................GCAGAGGAGGGCTGTTCTTCCCAT................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCCGCTTA......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................CGGCACTAGCCTTCTCTCTGCTTAA........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCA........................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGGTTT......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGTTTA......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCATTT............................................................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGCACTAGCCTTCTCTCTGCTTAAA....................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCGTTCTCTCTGCTTT......................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCTTTCTCTCTGCTT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTATCTGCTTCG........................................................ | 26 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ...................................................................................................AGAGGAACTAGCCTTCTCTCTG............................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTAA........................................................ | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GCGGAACTAGCCTTCTCTCTGCTA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................CGGAACTAGCCTTCTCTCTGCTTTT........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTC........................................................................................................ | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGATT.......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGCACTAGCCTTCTCTCTGCTT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAAAA...................................................... | 27 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTACA...................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTAGA....................................................... | 26 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCAT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCGTTT........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCCGAGGAGGGCTGTTCTTCC.................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCTA................................................................................................... | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................................................................GAACTAGCCTTCTCTCTGCTTTT........................................................ | 23 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................ATGAACTAGCCTTCTCTCTGCTTTT........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTATCTCTGCTT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................AGAGGAACTAGCCTTCTCTC............................................................... | 20 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| .....................................................................................................AGCAACTAGCCTTCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCCTCTCTCTGCTT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...................................................................................................TGAGGAACTAGCCTTCTCTCTGCTAT......................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGT............................................................ | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGCAA.......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTTAC....................................................... | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTATA........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTTTGCTTA......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCTTATAT...................................................... | 27 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCATTCTCTCTGCTAA......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTTT........................................................ | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGACTTCTCTCTGCTT.......................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGACTTCTCTCTGCT........................................................... | 22 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAGCTAGCCTTCTCTCTGCTT.......................................................... | 23 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .......................................................CCTCCGGCAGAGGAGGGCTGTTCT....................................................................................................... | 24 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTATGCTTTT........................................................ | 26 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTTGCCTTCTCTCTGCTTT......................................................... | 24 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTA...................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ................................................................GAGGAGGGCTGTTGTTCCCTTGGGTTCG.......................................................................................... | 28 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ....................................................................................................GAGGAACTAGCCTTATCTCTGA............................................................ | 22 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTCTCTCTGCATTA........................................................ | 25 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCTA................................................................................................. | 25 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCTCTCTGCTTAAA....................................................... | 25 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTCGCCTTCTCTCTGCTTCG........................................................ | 26 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCTTTTT............................................................................................... | 27 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 |
| ....................................................................................................GAAGAACTAGCCTTCTCTCTGCTTCG........................................................ | 26 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| ......................................................................................................GGAACTAGTCTTCTCTCTGCT........................................................... | 21 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCATTCTCTCTGCTTTT........................................................ | 25 | 3 | 3 | 0.67 | 2 | 2 | 0 | 0 |
| .................................................................AGGAGGGCTGTTCTTCCCTTAA............................................................................................... | 22 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTTCGCTCTGCTTTA........................................................ | 24 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGCAACTCGCCTTCTCTCTGCTAA......................................................... | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCCTTTTCTCTGCTTT......................................................... | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGAACTAGCATTCTCTCTGCTTT......................................................... | 24 | 2 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGCACTAGCCTTCTCTCTGCTTGA........................................................ | 25 | 3 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGCCCTAGCCTTCTCTCTGCTTCG........................................................ | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGAACTAGCCTACTCTCTGCTTTT........................................................ | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGAA........................................................... | 23 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ......................................................................................................GGAACTAGCATTCTCTCTGCTTTT........................................................ | 24 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTTCCCAGA................................................................................................ | 26 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................GTCAGAGGAGGGCTGTTCT....................................................................................................... | 19 | 1 | 3 | 0.33 | 1 | 0 | 0 | 1 |
| .....................................................................................................AGGAACTAGCCTTCTCCCTGATTAA........................................................ | 25 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGATGAGGGCTGTTC........................................................................................................ | 18 | 1 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| .....................................................................................................AGGACCTAGCCTTCTCTCTGCTTTT........................................................ | 25 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 |
| ............................................................GGCAGAGGAGGGCTGTTCTAA..................................................................................................... | 21 | 2 | 8 | 0.25 | 2 | 2 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTCTGTAG.......................................................... | 24 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 |
| ....................................................................................................GAGGAACTAGCCTTCTCTAA.............................................................. | 20 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| ..................................................................GGAGGGCTGTTCTTCCCTTTT............................................................................................... | 21 | 2 | 14 | 0.07 | 1 | 1 | 0 | 0 |
| ...................................................................................................AGAGGAACTCGCCTTCTCTC............................................................... | 20 | 2 | 15 | 0.07 | 1 | 0 | 0 | 1 |
|
CCATCCGACCCTTCAAGGACGACACGAACTTTCTTCTCTATGGATTTCCGGGTCCGGAAGCCGTCTCCTCCCGACAAGAAGGGAACCCAAAATACTGACCCTCCTTGATCGGAAGAGAGACGAATCCTCACCCGGTTGTCAAAGGAAGTAAGTCTGAGGCCGCCTTCCGACGACCGACTGTG
*******************************************..((((((..(((..(((((((((((((((((((((((...((((....))))))))))))).))))))).))))))).)))..))))))....********************************************* |
Read size | # Mismatch | Hit Count | Total Norm | Total |
|---|
Generated: 04/30/2015 at 05:43 PM